Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.2e-52 207.6 96 100.0
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.9e-40 167.5 74 100.0
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 1.2e-35 152.9 84 81.0
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 4.0e-34 147.9 74 86.5
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 4.0e-34 147.9 74 87.8
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.0e-33 145.6 74 83.8
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 4.4e-33 144.4 74 85.1
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 4.4e-33 144.4 74 83.8
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 5.8e-33 144.1 75 84.0
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 5.8e-33 144.1 74 83.8
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 9.8e-33 143.3 74 83.8
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 1.3e-32 142.9 74 82.4
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 1.3e-32 142.9 74 82.4
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 1.7e-32 142.5 75 80.0
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 2.2e-32 142.1 75 81.3
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 2.2e-32 142.1 74 82.4
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 2.2e-32 142.1 75 82.7
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 2.2e-32 142.1 75 81.3
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 2.2e-32 142.1 85 72.9
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 2.9e-32 141.7 74 82.4
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 3.7e-32 141.4 79 74.7
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 3.7e-32 141.4 74 79.7
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 3.7e-32 141.4 74 79.7
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 4.9e-32 141.0 79 75.9
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 6.4e-32 140.6 75 77.3
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 6.4e-32 140.6 74 81.1
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 6.4e-32 140.6 79 78.5
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 8.3e-32 140.2 74 79.7
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 1.1e-31 139.8 75 80.0
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.1e-31 139.8 74 79.7
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 1.4e-31 139.4 74 79.7
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 1.9e-31 139.0 74 79.7
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 1.9e-31 139.0 74 81.1
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 2.4e-31 138.7 74 77.0
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 2.4e-31 138.7 84 76.2
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 4.1e-31 137.9 74 81.1
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 5.4e-31 137.5 74 78.4
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 7.0e-31 137.1 74 79.7
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 9.2e-31 136.7 74 78.4
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 1.2e-30 136.3 79 72.2
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 1.2e-30 136.3 74 78.4
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 2.7e-30 135.2 79 75.9
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 3.5e-30 134.8 90 65.6
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 3.5e-30 134.8 74 78.4
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 4.6e-30 134.4 75 78.7
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 6.0e-30 134.0 74 77.0
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 6.0e-30 134.0 74 78.4
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 6.0e-30 134.0 74 78.4
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 6.0e-30 134.0 74 75.7
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 7.8e-30 133.7 73 75.3
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 1.0e-29 133.3 79 75.9
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 1.0e-29 133.3 74 77.0
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 1.0e-29 133.3 75 76.0
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 1.0e-29 133.3 74 78.4
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 1.0e-29 133.3 74 75.7
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 1.0e-29 133.3 74 77.0
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 1.0e-29 133.3 74 77.0
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 1.3e-29 132.9 74 77.0
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 2.3e-29 132.1 74 74.3
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 3.9e-29 131.3 74 77.0
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 3.9e-29 131.3 74 77.0
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 5.0e-29 131.0 74 73.0
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 5.0e-29 131.0 74 73.0
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 5.0e-29 131.0 74 73.0
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 6.6e-29 130.6 74 77.0
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 6.6e-29 130.6 79 73.4
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 1.1e-28 129.8 79 73.4
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 1.5e-28 129.4 74 73.0
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.5e-28 129.4 79 72.2
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 1.9e-28 129.0 74 74.3
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 1.9e-28 129.0 74 73.0
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 1.9e-28 129.0 74 73.0
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 3.3e-28 128.3 74 71.6
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.3e-28 128.3 74 71.6
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 3.3e-28 128.3 75 76.0
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 3.3e-28 128.3 75 76.0
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 3.3e-28 128.3 75 76.0
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 4.3e-28 127.9 74 71.6
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 7.3e-28 127.1 79 69.6
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 7.3e-28 127.1 74 74.3
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 7.3e-28 127.1 74 75.7
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 1.2e-27 126.3 80 66.2
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 1.6e-27 125.9 79 72.2
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 2.8e-27 125.2 75 68.0
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 6.2e-27 124.0 75 68.0
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 5.2e-26 120.9 75 66.7
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 6.8e-26 120.6 75 66.7
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 6.8e-26 120.6 75 66.7
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 6.8e-26 120.6 75 66.7
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 8.9e-26 120.2 75 68.0
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 2.6e-25 118.6 73 72.6
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 4.4e-25 117.9 75 65.3
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 4.4e-25 117.9 75 65.3
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 5.8e-25 117.5 85 62.4
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 7.5e-25 117.1 75 65.3
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 7.5e-25 117.1 76 67.1
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 9.8e-25 116.7 76 64.5
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 6.4e-24 114.0 74 64.9
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 1.1e-23 113.2 75 64.0
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 1.9e-23 112.5 74 62.2
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 1.2e-22 109.8 66 71.2
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 6.0e-22 107.5 75 64.0
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 3.9e-21 104.8 74 63.5
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 1.1e-20 103.2 74 63.5
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.5e-20 102.8 74 63.5
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 4.3e-20 101.3 74 60.8
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.2e-19 99.8 79 51.9
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 6.2e-19 97.4 71 56.3
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 6.2e-19 97.4 82 56.1
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 1.1e-18 96.7 76 55.3
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 1.2e-14 83.2 84 46.4
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 5.1e-13 77.8 45 73.3
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 3.3e-12 75.1 43 65.1
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 1.2e-09 66.6 76 39.5
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 4.9e-08 61.2 31 80.6


User provided reference genes

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