Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 8.5e-173 610.1 289 100.0
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.8e-170 602.4 289 98.6
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.4e-146 523.1 289 83.7
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 2.9e-136 488.8 288 78.5
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 1.4e-127 459.9 285 74.0
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 4.3e-124 448.4 289 72.0
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 9.0e-122 440.7 285 70.9
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 6.4e-120 434.5 285 68.4
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 1.3e-117 426.8 294 68.7
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 5.1e-117 424.9 285 66.3
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 9.6e-116 420.6 285 68.1
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 3.1e-114 415.6 285 67.7
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 3.1e-114 415.6 285 66.7
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 2.6e-113 412.5 288 64.9
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 3.4e-113 412.1 288 65.6
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 4.5e-113 411.8 284 68.3
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 9.9e-113 410.6 281 66.5
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 1.3e-112 410.2 282 67.0
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 1.7e-112 409.8 285 66.3
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 8.4e-112 407.5 281 65.8
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 1.4e-111 406.8 271 67.9
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 1.9e-111 406.4 285 66.3
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.1e-110 402.9 287 65.9
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 3.5e-110 402.1 293 64.8
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 6.0e-110 401.4 285 65.3
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 5.1e-109 398.3 285 63.2
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 6.7e-109 397.9 266 66.5
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 8.7e-109 397.5 285 63.9
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 1.5e-108 396.7 285 64.9
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 2.5e-108 396.0 285 61.8
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.5e-108 396.0 296 63.5
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 9.6e-108 394.0 275 65.8
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 1.3e-107 393.7 282 63.5
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 4.8e-107 391.7 291 63.6
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 4.8e-107 391.7 291 63.6
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 4.0e-106 388.7 285 63.9
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 5.3e-106 388.3 290 63.4
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 5.3e-106 388.3 291 63.6
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 1.2e-105 387.1 275 65.1
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 2.0e-105 386.3 289 63.0
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 3.4e-105 385.6 285 62.8
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 9.9e-105 384.0 290 62.8
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 9.9e-105 384.0 290 63.8
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 2.1e-102 376.3 291 60.8
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 7.4e-100 367.9 257 64.6
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 9.6e-100 367.5 277 63.5
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 2.1e-99 366.3 287 62.0
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 8.2e-99 364.4 278 64.0
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 2.0e-97 359.8 286 57.7
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 2.6e-97 359.4 234 69.7
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.3e-96 357.1 285 60.4
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 1.9e-95 353.2 289 60.2
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 7.1e-95 351.3 241 67.2
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 1.2e-94 350.5 233 66.5
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 1.9e-92 343.2 276 57.2
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 6.9e-90 334.7 278 56.5
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 1.0e-88 330.9 266 59.8
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 7.2e-87 324.7 281 52.0
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 3.3e-84 315.8 316 52.8
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.7e-83 313.5 243 60.5
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 3.7e-83 312.4 221 63.8
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 2.0e-76 290.0 282 46.8
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 2.2e-75 286.6 216 62.0
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 4.1e-74 282.3 223 60.5
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 5.3e-74 282.0 284 50.7
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 3.5e-73 279.3 288 53.8
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 8.2e-67 258.1 291 42.6
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 1.3e-64 250.8 369 40.1
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 2.1e-62 243.4 271 41.3
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 8.0e-62 241.5 182 59.3
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 4.0e-61 239.2 225 52.0
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 1.2e-60 237.7 273 40.3
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 5.3e-58 228.8 211 50.7
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 6.1e-54 215.3 228 50.4
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 8.0e-38 161.8 135 59.3
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 2.3e-37 160.2 105 70.5
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 2.0e-36 157.1 103 68.9
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.9e-34 150.6 178 47.2
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 1.8e-29 134.0 368 26.9
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 1.7e-24 117.5 66 77.3
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 4.1e-18 96.3 66 69.7
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 6.0e-09 65.9 45 64.4
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 1.3e-08 64.7 43 60.5
Zm00001eb340470 Zea mays HOM05D007847 ORTHO05D009946 1.6e-06 57.8 57 47.4
TAR628G1214 Trochodendron aralioides HOM05D007847 ORTHO05D414451 6.2e-06 55.8 38 60.5


User provided reference genes

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