Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006555 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 6.4e-301 1036.6 503 100.0
Actinidia11846 Actinidia chinensis HOM05D005787 ORTHO05D007011 1.1e-223 780.0 501 77.2
vmacro15819 Vaccinium macrocarpon HOM05D005787 ORTHO05D007011 5.9e-222 774.2 505 76.2
Dinv20032 Davidia involucrata HOM05D005787 ORTHO05D007011 4.0e-218 761.5 491 75.8
Rhsim02G0110900 Rhododendron simsii HOM05D005787 ORTHO05D007011 8.9e-218 760.4 505 75.6
QL05p074231 Quercus lobata HOM05D005787 ORTHO05D007011 6.0e-206 721.1 497 71.6
TAR624G0905 Trochodendron aralioides HOM05D005787 ORTHO05D007011 7.8e-206 720.7 497 71.4
Prupe.4G024200 Prunus persica HOM05D005787 ORTHO05D007011 8.1e-203 710.7 498 70.1
GSVIVG01012651001 Vitis vinifera HOM05D005787 ORTHO05D007011 1.8e-202 709.5 495 71.1
Thecc.06G217000 Theobroma cacao HOM05D005787 ORTHO05D007011 5.8e-201 704.5 499 70.1
Lj1C1227T21 Lonicera japonica HOM05D005787 ORTHO05D007011 3.2e-199 698.7 426 77.9
Nn1g07089 Nelumbo nucifera HOM05D005787 ORTHO05D007011 2.7e-198 695.7 503 68.8
Atru.chr10.2171 Acer truncatum HOM05D005787 ORTHO05D007011 3.5e-198 695.3 506 68.8
Haze_06771 Corylus avellana HOM05D005787 ORTHO05D007011 3.5e-198 695.3 497 69.6
Manes.16G010400 Manihot esculenta HOM05D005787 ORTHO05D007011 1.0e-197 693.7 500 67.8
Oeu015733.1 Olea europaea HOM05D005787 ORTHO05D007011 3.9e-197 691.8 499 68.7
Cpa.g.sc198.22 Carica papaya HOM05D005787 ORTHO05D007011 8.6e-197 690.6 501 68.1
Gohir.D05G171800 Gossypium hirsutum HOM05D005787 ORTHO05D007011 1.9e-196 689.5 495 69.9
Cc09_g01960 Coffea canephora HOM05D005787 ORTHO05D007011 4.3e-196 688.3 502 68.5
Gorai.009G176900 Gossypium raimondii HOM05D005787 ORTHO05D007011 4.3e-196 688.3 495 69.7
Potri.004G019100 Populus trichocarpa HOM05D005787 ORTHO05D007011 4.0e-194 681.8 489 66.9
PSO541G2671 Papaver somniferum HOM05D005787 ORTHO05D007011 1.5e-193 679.9 500 65.8
Gohir.A05G168600 Gossypium hirsutum HOM05D005787 ORTHO05D007011 3.4e-193 678.7 506 68.2
PGR042G0837 Punica granatum HOM05D005787 ORTHO05D007011 9.9e-193 677.2 502 65.3
ClCG03G004890 Citrullus lanatus HOM05D005787 ORTHO05D007011 2.2e-192 676.0 503 67.6
Ca_00626_v3 Cicer arietinum L. HOM05D005787 ORTHO05D007011 4.9e-192 674.9 498 67.5
Ciclev10015055m.g Citrus clementina HOM05D005787 ORTHO05D007011 4.9e-192 674.9 502 67.3
Glyma.13G206600 Glycine max HOM05D005787 ORTHO05D007011 1.1e-191 673.7 501 66.1
Sabra04G0010700 Salix brachista HOM05D005787 ORTHO05D007011 1.9e-191 672.9 426 73.0
THA.LOC104812988 Tarenaya hassleriana HOM05D005787 ORTHO05D007011 3.2e-191 672.2 493 66.3
RcHm_v2.0_Chr5g0003731 Rosa chinensis HOM05D005787 ORTHO05D007011 2.1e-190 669.5 495 67.5
TPR.G7642 Trifolium pratense HOM05D005787 ORTHO05D007011 2.1e-190 669.5 497 66.6
FvH4_3g02480 Fragaria vesca HOM05D005787 ORTHO05D007011 3.5e-190 668.7 498 67.3
Lj6g0006260 Lotus japonicus HOM05D005787 ORTHO05D007011 3.5e-190 668.7 498 66.9
FAN25G2524 Fragaria x ananassa HOM05D005787 ORTHO05D007011 4.6e-190 668.3 498 67.1
Eucgr.E04102 Eucalyptus grandis HOM05D005787 ORTHO05D007011 3.9e-189 665.2 499 66.7
Glyma.15G106100 Glycine max HOM05D005787 ORTHO05D007011 3.9e-189 665.2 497 65.6
Peaxi162Scf00262g00038 Petunia axillaris HOM05D005787 ORTHO05D007011 5.1e-189 664.8 488 67.6
Medtr2g022770 Medicago truncatula HOM05D005787 ORTHO05D007011 8.7e-189 664.1 503 65.8
SalBow1G7047 Salvia bowleyana HOM05D005787 ORTHO05D007011 8.7e-189 664.1 499 67.3
Phvul.006G151200 Phaseolus vulgaris HOM05D005787 ORTHO05D007011 1.1e-188 663.7 498 65.7
Sopen02g025020 Solanum pennellii HOM05D005787 ORTHO05D007011 1.5e-188 663.3 496 65.7
CAN.G569.24 Capsicum annuum HOM05D005787 ORTHO05D007011 7.3e-188 661.0 496 66.5
MD10G1317600 Malus domestica HOM05D005787 ORTHO05D007011 7.3e-188 661.0 426 73.7
PGSC0003DMG400002087 Solanum tuberosum HOM05D005787 ORTHO05D007011 7.3e-188 661.0 496 65.5
CsaV3_1G010950 Cucumis sativus L. HOM05D005787 ORTHO05D007011 2.1e-187 659.4 495 66.3
VMungo0540G0861 Vigna mungo HOM05D005787 ORTHO05D007011 8.1e-187 657.5 501 65.5
Solyc02g080320.4 Solanum lycopersicum HOM05D005787 ORTHO05D007011 1.1e-186 657.1 496 65.1
Migut.H01558 Erythranthe guttata HOM05D005787 ORTHO05D007011 4.0e-186 655.2 501 65.7
Aqoxy1G03304 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 2.0e-185 652.9 488 65.6
Lj6g0025395 Lotus japonicus HOM05D005787 ORTHO05D007011 9.9e-185 650.6 500 64.0
Nitab4.5_0003893g0010 Nicotiana tabacum HOM05D005787 ORTHO05D007011 9.9e-185 650.6 498 65.9
CANSAT56G2549 Cannabis sativa HOM05D005787 ORTHO05D007011 1.3e-184 650.2 500 64.8
Psat1g182520 Pisum sativum HOM05D005787 ORTHO05D007011 1.3e-184 650.2 498 65.5
CSS0044707 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 3.8e-184 648.7 325 98.5
Aa31LG6G3750 Aethionema arabicum HOM05D005787 ORTHO05D007011 1.1e-183 647.1 496 64.9
Sed0015393 Sechium edule HOM05D005787 ORTHO05D007011 2.4e-183 646.0 499 64.1
Lalb_Chr18g0056211 Lupinus albus HOM05D005787 ORTHO05D007011 7.1e-183 644.4 496 64.3
arahy.Tifrunner.gnm1.ann1.J4BAYR Arachis hypogaea HOM05D005787 ORTHO05D007011 1.3e-181 640.2 431 70.1
CsaV3_1G010930 Cucumis sativus L. HOM05D005787 ORTHO05D007011 8.7e-181 637.5 489 63.8
A01p13100 Brassica napus HOM05D005787 ORTHO05D007011 1.5e-180 636.7 491 63.3
Psat0s341g0040 Pisum sativum HOM05D005787 ORTHO05D007011 2.5e-180 636.0 432 69.7
TPR.G33224 Trifolium pratense HOM05D005787 ORTHO05D007011 5.6e-180 634.8 454 67.4
Sp7g19940 Schrenkiella parvula HOM05D005787 ORTHO05D007011 9.6e-180 634.0 497 63.4
arahy.Tifrunner.gnm1.ann1.N0U7LY Arachis hypogaea HOM05D005787 ORTHO05D007011 1.3e-179 633.6 497 62.8
CARHR228510 Cardamine hirsuta HOM05D005787 ORTHO05D007011 4.8e-179 631.7 493 63.5
C01p15790 Brassica napus HOM05D005787 ORTHO05D007011 6.2e-179 631.3 491 62.7
BolC1t01532H Brassica oleracea HOM05D005787 ORTHO05D007011 6.2e-179 631.3 491 62.7
BcaC09g51204 Brassica carinata HOM05D005787 ORTHO05D007011 8.1e-179 630.9 491 63.5
BraA01t01253Z Brassica rapa HOM05D005787 ORTHO05D007011 8.1e-179 630.9 491 62.3
BcaNung02245 Brassica carinata HOM05D005787 ORTHO05D007011 1.2e-177 627.1 499 62.9
AL7G32160 Arabidopsis lyrata HOM05D005787 ORTHO05D007011 5.8e-177 624.8 498 62.9
SGA_v2.0_scaffold89G27454 Striga asiatica HOM05D005787 ORTHO05D007011 7.6e-177 624.4 492 63.8
Lalb_Chr18g0056221 Lupinus albus HOM05D005787 ORTHO05D007011 1.3e-176 623.6 432 69.0
AT4G21770 Arabidopsis thaliana HOM05D005787 ORTHO05D007011 6.4e-176 621.3 498 63.1
ECA248G2950 Erigeron canadensis HOM05D005787 ORTHO05D007011 2.4e-175 619.4 491 62.1
Medtr7g113450 Medicago truncatula HOM05D005787 ORTHO05D007011 1.2e-174 617.1 430 69.1
HanXRQChr01g0003621 Helianthus annuus HOM05D005787 ORTHO05D007011 3.5e-174 615.5 450 65.3
Lsat_1_v5_gn_1_122000 Lactuca sativa HOM05D005787 ORTHO05D007011 6.0e-174 614.8 505 60.8
AUR62021985 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.0e-173 614.0 493 61.9
AUR62012670 Chenopodium quinoa HOM05D005787 ORTHO05D007011 3.0e-173 612.5 430 66.3
EL10Ac8g20016 Beta vulgaris HOM05D005787 ORTHO05D007011 5.1e-173 611.7 507 59.6
Carub.0007s1963 Capsella rubella HOM05D005787 ORTHO05D007011 6.7e-173 611.3 424 69.1
ATR0752G095 Amborella trichopoda HOM05D005787 ORTHO05D007011 8.7e-173 610.9 501 60.5
AUR62012669 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.5e-172 610.1 507 60.9
Thhalv10025093m.g Eutrema salsugineum HOM05D005787 ORTHO05D007011 2.5e-172 609.4 497 61.0
Hund21387 Selenicereus undatus HOM05D005787 ORTHO05D007011 9.6e-172 607.4 506 59.9
HanXRQChr05g0138101 Helianthus annuus HOM05D005787 ORTHO05D007011 1.6e-171 606.7 442 65.4
MELO3C002471.2 Cucumis melo HOM05D005787 ORTHO05D007011 2.8e-171 605.9 455 65.7
DCAR_024937 Daucus carota HOM05D005787 ORTHO05D007011 1.0e-165 587.4 388 72.2
AUR62021984 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.8e-165 586.6 466 60.9
Hund21388 Selenicereus undatus HOM05D005787 ORTHO05D007011 5.1e-165 585.1 415 65.8
Ah.09g235150 Amaranthus hybridus HOM05D005787 ORTHO05D007011 1.9e-164 583.2 414 67.4
Ah.09g235140 Amaranthus hybridus HOM05D005787 ORTHO05D007011 5.7e-164 581.6 439 63.1
MD10G1317000 Malus domestica HOM05D005787 ORTHO05D007011 2.1e-163 579.7 449 65.9
Lsat_1_v5_gn_1_128660 Lactuca sativa HOM05D005787 ORTHO05D007011 2.8e-163 579.3 504 60.1
MBI02_g15259_MAGBIO Magnolia biondii HOM05D005787 ORTHO05D007011 8.2e-163 577.8 498 61.6
MELO3C002473.2 Cucumis melo HOM05D005787 ORTHO05D007011 7.6e-161 571.2 385 71.4
EL10Ac8g20017 Beta vulgaris HOM05D005787 ORTHO05D007011 1.3e-157 560.5 438 63.0
Zm00001eb110780 Zea mays HOM05D005787 ORTHO05D007011 8.2e-155 551.2 462 58.4
unitig_0.g957 Utricularia gibba HOM05D005787 ORTHO05D007011 3.1e-154 549.3 387 67.4
CiPaw.09G089100 Carya illinoinensis HOM05D005787 ORTHO05D007011 4.2e-151 538.9 399 67.9
HPP92_013307 Vanilla planifolia HOM05D005787 ORTHO05D007011 1.8e-149 533.5 383 63.7
ECA248G3226 Erigeron canadensis HOM05D005787 ORTHO05D007011 1.8e-146 523.5 424 60.8
Sc05g0009040 Simmondsia chinensis HOM05D005787 ORTHO05D007011 3.1e-146 522.7 404 64.6
CiPaw.10G069200 Carya illinoinensis HOM05D005787 ORTHO05D007011 9.1e-146 521.2 403 64.5
Aqoxy92s001 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 1.7e-123 447.2 453 53.6
Mapoly0146s0040 Marchantia polymorpha HOM05D005787 ORTHO05D007011 7.2e-119 431.8 438 49.3
Mapoly0067s0098 Marchantia polymorpha HOM05D005787 ORTHO05D007011 8.9e-117 424.9 434 50.2
CANSAT64G1034 Cannabis sativa HOM05D005787 ORTHO05D007011 1.1e-114 417.9 249 78.7
Pp3c5_11180 Physcomitrium patens HOM05D005787 ORTHO05D007011 2.4e-114 416.8 426 48.6
SMO200G0166 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 4.1e-114 416.0 434 47.9
SMO200G0270 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 1.3e-107 394.4 465 44.9
DCAR_029795 Daucus carota HOM05D005787 ORTHO05D007011 1.1e-98 364.8 267 70.0
SEGI_04414 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 2.9e-83 313.5 273 54.9
CDE11G0446 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 1.1e-71 275.0 215 57.7
CDE11G0095 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 5.6e-71 272.7 165 77.0
RcHm_v2.0_Chr5g0003761 Rosa chinensis HOM05D005787 ORTHO05D007011 4.8e-70 269.6 225 64.0
MSTRG.13153 Avicennia marina HOM05D005787 ORTHO05D007011 1.9e-66 257.7 191 64.9
AagrBONN_evm.TU.Sc2ySwM_228.3336 Anthoceros agrestis HOM05D005787 ORTHO05D007011 1.6e-65 254.6 218 55.5
SEGI_19902 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 1.2e-60 238.4 157 68.2
DCAR_029794 Daucus carota HOM05D005787 ORTHO05D007011 2.5e-55 220.7 130 75.4
Hma1.2p1_3055F.1_g332150 Hydrangea macrophylla HOM05D005787 ORTHO05D007011 2.0e-44 184.5 148 61.5
MCO11G946 Micromonas commoda HOM05D005787 ORTHO05D007011 1.3e-30 138.7 391 29.4
Cre11.g474850 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 3.7e-30 137.1 411 28.0
BcaC05g26802 Brassica carinata HOM05D005787 ORTHO05D007011 2.2e-27 127.9 86 68.6
MCO10G204 Micromonas commoda HOM05D005787 ORTHO05D007011 2.4e-21 107.8 351 26.5
PRCOL_00006623 Prasinoderma coloniale HOM05D005787 ORTHO05D007011 9.1e-21 105.9 412 29.4
A09p39340 Brassica napus HOM05D005787 ORTHO05D007011 7.5e-15 86.3 55 76.4
A01p18320 Brassica napus HOM05D005787 ORTHO05D007011 2.8e-14 84.3 80 60.0
Cre10.g462600 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 1.1e-10 72.4 91 41.8
C01p29500 Brassica napus HOM05D005787 ORTHO05D042539 1.2e-09 68.9 61 55.7
BolC1t02892H Brassica oleracea HOM05D005787 ORTHO05D042539 1.2e-09 68.9 61 55.7
QL05p074297 Quercus lobata HOM05D000001 ORTHO05D007011 1.0e-08 65.9 55 50.9
Rhsim13G0060400 Rhododendron simsii HOM05D001179 ORTHO05D339156 7.5e-07 59.7 57 54.4


User provided reference genes

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