Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006526 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D000410 8.7e-102 373.6 188 100.0
vmacro16591 Vaccinium macrocarpon HOM05D000306 ORTHO05D000410 1.6e-47 193.4 181 61.3
Rhsim12G0162100 Rhododendron simsii HOM05D000306 ORTHO05D000410 5.8e-45 184.9 172 60.5
Actinidia19082 Actinidia chinensis HOM05D000306 ORTHO05D000410 8.3e-44 181.0 179 54.7
Actinidia34956 Actinidia chinensis HOM05D000306 ORTHO05D000410 1.2e-42 177.2 175 54.9
CSS0003018 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D000410 6.0e-42 174.9 176 57.4
CSS0015029 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D000410 6.0e-42 174.9 176 57.4
Dinv09175 Davidia involucrata HOM05D000306 ORTHO05D000410 2.9e-36 156.0 171 53.8
Rhsim08G0168400 Rhododendron simsii HOM05D000306 ORTHO05D000410 6.4e-36 154.8 174 52.9
Manes.14G069700 Manihot esculenta HOM05D000306 ORTHO05D000410 3.9e-33 145.6 176 46.6
CANSAT80G1526 Cannabis sativa HOM05D000306 ORTHO05D000410 5.6e-32 141.7 183 49.7
vmacro19359 Vaccinium macrocarpon HOM05D000306 ORTHO05D000410 1.6e-31 140.2 206 44.2
Dinv20693 Davidia involucrata HOM05D000306 ORTHO05D000410 2.1e-31 139.8 164 52.4
Sabra15G0096700 Salix brachista HOM05D000306 ORTHO05D000410 6.2e-31 138.3 174 46.6
Potri.015G071800 Populus trichocarpa HOM05D000306 ORTHO05D000410 1.1e-30 137.5 174 46.0
Manes.06G101400 Manihot esculenta HOM05D000306 ORTHO05D000410 1.4e-30 137.1 177 44.1
Atru.chr9.2413_Atru.chr9.2414 Acer truncatum HOM05D000306 ORTHO05D000410 3.1e-30 136.0 176 44.9
Lj9C453T2 Lonicera japonica HOM05D000306 ORTHO05D000410 2.6e-29 132.9 179 45.3
Thecc.03G005500 Theobroma cacao HOM05D000306 ORTHO05D000410 3.4e-29 132.5 170 47.1
Solyc03g113920.4 Solanum lycopersicum HOM05D000306 ORTHO05D000410 4.4e-29 132.1 177 47.5
Sabra12G0055100 Salix brachista HOM05D000306 ORTHO05D000410 5.8e-29 131.7 174 44.3
Ciclev10019512m.g Citrus clementina HOM05D000306 ORTHO05D000410 1.7e-28 130.2 181 43.1
Sopen03g032970 Solanum pennellii HOM05D000306 ORTHO05D000410 1.7e-28 130.2 177 46.9
PGR044G1217 Punica granatum HOM05D000306 ORTHO05D000410 2.2e-28 129.8 164 43.9
Cpa.g.sc110.20 Carica papaya HOM05D000306 ORTHO05D000410 2.9e-28 129.4 161 48.4
PGSC0003DMG400024475 Solanum tuberosum HOM05D000306 ORTHO05D000410 3.8e-28 129.0 178 46.6
Duzib068G1038 Durio zibethinus HOM05D000306 ORTHO05D000410 4.9e-28 128.6 171 48.0
Eucgr.K02876 Eucalyptus grandis HOM05D000306 ORTHO05D000410 8.4e-28 127.9 177 39.5
Nitab4.5_0013311g0010 Nicotiana tabacum HOM05D000306 ORTHO05D000410 1.1e-27 127.5 176 44.3
Potri.012G077000 Populus trichocarpa HOM05D000306 ORTHO05D000410 1.4e-27 127.1 173 43.4
TWI81G0031 Tripterygium wilfordii HOM05D000306 ORTHO05D000410 1.4e-27 127.1 178 43.8
Nitab4.5_0001286g0040 Nicotiana tabacum HOM05D000306 ORTHO05D000410 1.9e-27 126.7 176 43.8
Peaxi162Scf00017g00248 Petunia axillaris HOM05D000306 ORTHO05D000410 7.1e-27 124.8 164 46.3
TWI60G0713 Tripterygium wilfordii HOM05D000306 ORTHO05D000410 7.1e-27 124.8 178 42.7
Haze_07445 Corylus avellana HOM05D000306 ORTHO05D000410 1.2e-26 124.0 177 42.9
CAN.G853.7 Capsicum annuum HOM05D000306 ORTHO05D000410 1.6e-26 123.6 169 44.4
FvH4_5g16470 Fragaria vesca HOM05D000306 ORTHO05D000410 1.6e-26 123.6 176 45.5
FAN04G3002 Fragaria x ananassa HOM05D000306 ORTHO05D000410 1.6e-26 123.6 176 45.5
CiPaw.12G023600 Carya illinoinensis HOM05D000306 ORTHO05D000410 2.1e-26 123.2 180 45.0
FAN13G1688 Fragaria x ananassa HOM05D000306 ORTHO05D000410 2.7e-26 122.9 176 45.5
MD06G1180400 Malus domestica HOM05D000306 ORTHO05D000410 2.7e-26 122.9 177 42.4
RcHm_v2.0_Chr7g0179621 Rosa chinensis HOM05D000306 ORTHO05D000410 2.7e-26 122.9 176 45.5
Sc12g0005570 Simmondsia chinensis HOM05D000306 ORTHO05D000410 2.7e-26 122.9 168 42.9
Gorai.003G109800 Gossypium raimondii HOM05D000306 ORTHO05D000410 2.3e-25 119.8 159 48.4
FAN08G1052 Fragaria x ananassa HOM05D000306 ORTHO05D000410 3.0e-25 119.4 176 44.9
Gohir.A03G061900 Gossypium hirsutum HOM05D000306 ORTHO05D000410 3.0e-25 119.4 159 48.4
Gohir.D03G104100 Gossypium hirsutum HOM05D000306 ORTHO05D000410 3.0e-25 119.4 159 48.4
Gohir.D12G277300 Gossypium hirsutum HOM05D000306 ORTHO05D000410 3.0e-25 119.4 159 46.5
Gorai.008G297800 Gossypium raimondii HOM05D000306 ORTHO05D000410 3.0e-25 119.4 159 46.5
Gohir.A12G276380 Gossypium hirsutum HOM05D000306 ORTHO05D000410 3.9e-25 119.0 159 46.5
Cc04_g13430 Coffea canephora HOM05D000306 ORTHO05D000410 1.1e-24 117.5 173 42.8
Psat4g056120 Pisum sativum HOM05D000306 ORTHO05D000410 1.1e-24 117.5 170 41.8
Cfa019075 Carpinus fangiana HOM05D000306 ORTHO05D000410 1.5e-24 117.1 177 42.4
TPR.G37569 Trifolium pratense HOM05D000306 ORTHO05D000410 3.3e-24 115.9 170 43.5
CiPaw.11G030800 Carya illinoinensis HOM05D000306 ORTHO05D000410 7.3e-24 114.8 171 45.6
QL10p012493 Quercus lobata HOM05D000306 ORTHO05D000410 9.6e-24 114.4 178 44.4
COL.COLO4_04327 Corchorus olitorius HOM05D000306 ORTHO05D000410 2.8e-23 112.8 171 45.0
Phvul.003G197500 Phaseolus vulgaris HOM05D000306 ORTHO05D000410 2.8e-23 112.8 168 44.0
Glyma.17G092700 Glycine max HOM05D000306 ORTHO05D000410 6.2e-23 111.7 169 43.8
Ca_21895_v3 Cicer arietinum L. HOM05D000306 ORTHO05D000410 1.1e-22 110.9 171 39.8
Duzib205G1531 Durio zibethinus HOM05D000306 ORTHO05D000410 1.1e-22 110.9 159 43.4
Duzib084G0932 Durio zibethinus HOM05D000306 ORTHO05D000410 1.4e-22 110.5 170 41.2
Medtr4g106810 Medicago truncatula HOM05D000306 ORTHO05D000410 1.8e-22 110.2 170 42.4
Glyma.05G034600 Glycine max HOM05D000306 ORTHO05D000410 6.9e-22 108.2 169 44.4
MD14G1185500 Malus domestica HOM05D000306 ORTHO05D000410 2.0e-21 106.7 172 39.5
Lj5A121G95 Lonicera japonica HOM05D000306 ORTHO05D000410 2.6e-21 106.3 182 37.4
Nitab4.5_0000026g0440 Nicotiana tabacum HOM05D000306 ORTHO05D000410 2.9e-20 102.8 176 38.6
Lj4g0015244 Lotus japonicus HOM05D000306 ORTHO05D000410 8.4e-20 101.3 171 40.9
VMungo1215G1533 Vigna mungo HOM05D000306 ORTHO05D000410 8.4e-20 101.3 168 42.3
Cc04_g13390 Coffea canephora HOM05D000306 ORTHO05D000410 4.2e-19 99.0 174 38.5
Ah.11g046150 Amaranthus hybridus HOM05D000306 ORTHO05D000410 9.3e-19 97.8 164 39.0
Lalb_Chr13g0297941 Lupinus albus HOM05D000306 ORTHO05D000410 1.2e-18 97.4 165 38.8
DCAR_026115 Daucus carota HOM05D000306 ORTHO05D000410 7.8e-18 94.7 177 37.3
Rhsim08G0168500 Rhododendron simsii HOM05D000306 ORTHO05D000410 5.1e-17 92.0 99 49.5
MSTRG.11422 Avicennia marina HOM05D000306 ORTHO05D000410 1.5e-16 90.5 162 36.4
Aqoxy3G03087 Aquilegia oxysepala HOM05D000306 ORTHO05D000410 1.3e-15 87.4 176 36.9
CsaV3_1G001770 Cucumis sativus L. HOM05D000306 ORTHO05D000410 1.6e-15 87.0 169 33.1
arahy.Tifrunner.gnm1.ann1.13F19V Arachis hypogaea HOM05D000306 ORTHO05D000410 2.1e-15 86.7 185 36.8
arahy.Tifrunner.gnm1.ann1.SYM6HI Arachis hypogaea HOM05D000306 ORTHO05D000410 2.1e-15 86.7 185 36.8
Nitab4.5_0001887g0040 Nicotiana tabacum HOM05D000306 ORTHO05D000410 2.8e-15 86.3 177 34.5
EL10Ac5g10822 Beta vulgaris HOM05D000306 ORTHO05D000410 8.1e-15 84.7 163 37.4
Lsat_1_v5_gn_4_73301 Lactuca sativa HOM05D000306 ORTHO05D000410 2.4e-14 83.2 157 37.6
AUR62031038 Chenopodium quinoa HOM05D000306 ORTHO05D000410 6.9e-14 81.6 152 36.8
PSO063G0865 Papaver somniferum HOM05D000306 ORTHO05D000410 6.9e-14 81.6 178 33.1
MELO3C017117.2 Cucumis melo HOM05D000306 ORTHO05D000410 9.0e-14 81.3 169 32.5
PSO832G2823 Papaver somniferum HOM05D000306 ORTHO05D000410 9.0e-14 81.3 177 33.3
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 2.6e-13 79.7 173 34.7
DCAR_016504 Daucus carota HOM05D000306 ORTHO05D000410 3.4e-13 79.3 182 33.5
Lalb_Chr12g0201451 Lupinus albus HOM05D000306 ORTHO05D000410 7.6e-13 78.2 114 37.7
HanXRQChr09g0271761 Helianthus annuus HOM05D000306 ORTHO05D000410 9.9e-13 77.8 165 35.2
Sed0021292 Sechium edule HOM05D000306 ORTHO05D000410 2.4e-11 73.2 150 38.0
Actinidia04968 Actinidia chinensis HOM05D000306 ORTHO05D023263 4.2e-11 72.4 178 34.3
CSS0001473 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D000410 1.6e-10 70.5 166 30.1
CSS0031501 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D000410 1.6e-10 70.5 166 30.1
ECA232G1293 Erigeron canadensis HOM05D000306 ORTHO05D000410 1.6e-10 70.5 159 35.8
Migut.D01792 Erythranthe guttata HOM05D000306 ORTHO05D000410 1.6e-10 70.5 128 36.7
Dinv09173 Davidia involucrata HOM05D000306 ORTHO05D000410 4.6e-10 68.9 169 29.6
CSS0013820 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D110013 7.9e-10 68.2 142 35.2
CSS0049138 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D109278 7.9e-10 68.2 142 35.2
SalBow3G1709 Salvia bowleyana HOM05D000306 ORTHO05D000410 1.0e-09 67.8 172 30.2
MSTRG.4384 Avicennia marina HOM05D000306 ORTHO05D000410 6.7e-09 65.1 177 31.6
PGR083G0033 Punica granatum HOM05D000306 ORTHO05D000410 6.7e-09 65.1 182 28.0
Prupe.5G178300 Prunus persica HOM05D000306 ORTHO05D000410 1.1e-08 64.3 83 47.0
Hund09409 Selenicereus undatus HOM05D000306 ORTHO05D000410 1.5e-08 63.9 144 34.7
HanXRQChr02g0036741 Helianthus annuus HOM05D000306 ORTHO05D000410 1.6e-07 60.5 133 34.6
Haze_01071 Corylus avellana HOM05D000660 ORTHO05D003823 4.8e-07 58.9 133 32.3
Hund02713 Selenicereus undatus HOM05D000306 ORTHO05D000410 1.4e-06 57.4 153 34.6
Actinidia33042 Actinidia chinensis HOM05D000306 ORTHO05D023263 1.8e-06 57.0 106 36.8


User provided reference genes

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