Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006466 Camellia sinensis var. sinensis HOM05D007125 ORTHO05D008766 1.2e-43 179.5 94 100.0
COL.COLO4_14596 Corchorus olitorius HOM05D007125 ORTHO05D008766 1.7e-29 132.5 90 75.6
Actinidia13779 Actinidia chinensis HOM05D007125 ORTHO05D008766 2.2e-29 132.1 91 80.2
Actinidia29131 Actinidia chinensis HOM05D007125 ORTHO05D008766 1.9e-28 129.0 90 75.6
TWI77G0961 Tripterygium wilfordii HOM05D007125 ORTHO05D008766 7.1e-28 127.1 90 70.0
Haze_20950 Corylus avellana HOM05D007125 ORTHO05D008766 9.3e-28 126.7 90 72.2
Duzib093G0828 Durio zibethinus HOM05D007125 ORTHO05D008766 1.6e-27 125.9 90 73.3
Thecc.05G022200 Theobroma cacao HOM05D007125 ORTHO05D008766 1.6e-27 125.9 90 71.1
Hma1.2p1_0763F.1_g214640 Hydrangea macrophylla HOM05D007125 ORTHO05D008766 4.6e-27 124.4 90 72.2
Dinv35513 Davidia involucrata HOM05D007125 ORTHO05D008766 7.9e-27 123.6 90 73.3
ClCG04G007250 Citrullus lanatus HOM05D007125 ORTHO05D008766 1.0e-26 123.2 90 72.2
Potri.006G096400 Populus trichocarpa HOM05D007125 ORTHO05D008766 1.0e-26 123.2 88 73.9
CsaV3_4G025990 Cucumis sativus L. HOM05D007125 ORTHO05D008766 1.8e-26 122.5 90 73.3
Cpa.g.sc56.115 Carica papaya HOM05D007125 ORTHO05D008766 2.3e-26 122.1 90 71.1
MELO3C003224.2 Cucumis melo HOM05D007125 ORTHO05D008766 3.9e-26 121.3 90 72.2
CiPaw.09G206100 Carya illinoinensis HOM05D007125 ORTHO05D008766 8.7e-26 120.2 90 72.2
TAR623G0133 Trochodendron aralioides HOM05D007125 ORTHO05D008766 8.7e-26 120.2 90 70.0
vmacro20236 Vaccinium macrocarpon HOM05D007125 ORTHO05D008766 8.7e-26 120.2 89 73.0
Lsat_1_v5_gn_8_99881 Lactuca sativa HOM05D007125 ORTHO05D008766 1.1e-25 119.8 90 63.3
Ciclev10013588m.g Citrus clementina HOM05D007125 ORTHO05D008766 1.5e-25 119.4 90 64.4
Sed0001650 Sechium edule HOM05D007125 ORTHO05D008766 3.3e-25 118.2 90 70.0
Lj1g0008640 Lotus japonicus HOM05D007125 ORTHO05D008766 7.4e-25 117.1 89 66.3
AT3G09080 Arabidopsis thaliana HOM05D007125 ORTHO05D008766 2.8e-24 115.2 90 70.0
Lj2A79T37 Lonicera japonica HOM05D007125 ORTHO05D008766 1.4e-23 112.8 90 66.7
THA.LOC104823281 Tarenaya hassleriana HOM05D007125 ORTHO05D008766 1.8e-23 112.5 90 64.4
Carub.0003s0824 Capsella rubella HOM05D007125 ORTHO05D008766 2.4e-23 112.1 90 67.8
Lalb_Chr03g0042981 Lupinus albus HOM05D007125 ORTHO05D008766 2.4e-23 112.1 89 64.0
ATR0618G048 Amborella trichopoda HOM05D007125 ORTHO05D008766 4.0e-23 111.3 90 64.4
Aqoxy1G00714 Aquilegia oxysepala HOM05D007125 ORTHO05D008766 4.0e-23 111.3 91 62.6
AL3G20150 Arabidopsis lyrata HOM05D007125 ORTHO05D008766 4.0e-23 111.3 90 68.9
CARHR083450 Cardamine hirsuta HOM05D007125 ORTHO05D008766 4.0e-23 111.3 90 67.8
Sopen09g007020 Solanum pennellii HOM05D007125 ORTHO05D008766 4.0e-23 111.3 90 65.6
BraA01t04316Z Brassica rapa HOM05D007125 ORTHO05D008766 9.0e-23 110.2 90 67.8
Nn2g11366 Nelumbo nucifera HOM05D007125 ORTHO05D008766 9.0e-23 110.2 90 62.2
PGR031G2086 Punica granatum HOM05D007125 ORTHO05D008766 9.0e-23 110.2 90 65.6
HanXRQChr04g0102021 Helianthus annuus HOM05D007125 ORTHO05D008766 1.2e-22 109.8 90 61.1
Solyc09g013160.3 Solanum lycopersicum HOM05D007125 ORTHO05D008766 2.0e-22 109.0 90 65.6
Ca_09172_v3 Cicer arietinum L. HOM05D007125 ORTHO05D008766 3.4e-22 108.2 89 61.8
BcaC09g48007 Brassica carinata HOM05D007125 ORTHO05D008766 4.5e-22 107.8 90 66.7
CANSAT35G1716 Cannabis sativa HOM05D007125 ORTHO05D008766 4.5e-22 107.8 94 63.8
BolC1t05475H Brassica oleracea HOM05D007125 ORTHO05D008766 7.6e-22 107.1 90 66.7
DCAR_024035 Daucus carota HOM05D007125 ORTHO05D008766 7.6e-22 107.1 89 65.2
Sc01g0006770 Simmondsia chinensis HOM05D007125 ORTHO05D008766 7.6e-22 107.1 90 64.4
Aa31LG3G1610 Aethionema arabicum HOM05D007125 ORTHO05D008766 1.3e-21 106.3 89 66.3
GSVIVG01034011001 Vitis vinifera HOM05D007125 ORTHO05D008766 1.3e-21 106.3 84 63.1
Thhalv10022253m.g Eutrema salsugineum HOM05D007125 ORTHO05D008766 1.7e-21 105.9 89 65.2
TPR.G1550 Trifolium pratense HOM05D007125 ORTHO05D008766 1.7e-21 105.9 90 62.2
Nitab4.5_0009193g0010 Nicotiana tabacum HOM05D007125 ORTHO05D008766 2.2e-21 105.5 92 63.0
ECA236G2625 Erigeron canadensis HOM05D007125 ORTHO05D008766 2.9e-21 105.1 93 58.1
Phvul.008G107900 Phaseolus vulgaris HOM05D007125 ORTHO05D008766 2.9e-21 105.1 89 64.0
VMungo1383G1324 Vigna mungo HOM05D007125 ORTHO05D008766 3.8e-21 104.8 89 64.0
arahy.Tifrunner.gnm1.ann1.8EY2MC Arachis hypogaea HOM05D007125 ORTHO05D008766 4.9e-21 104.4 89 64.0
arahy.Tifrunner.gnm1.ann1.A1GI61 Arachis hypogaea HOM05D007125 ORTHO05D008766 4.9e-21 104.4 89 64.0
Medtr7g066770 Medicago truncatula HOM05D007125 ORTHO05D008766 8.4e-21 103.6 91 63.7
Nitab4.5_0000008g0740 Nicotiana tabacum HOM05D007125 ORTHO05D008766 1.4e-20 102.8 92 62.0
SalBow5G1282 Salvia bowleyana HOM05D007125 ORTHO05D008766 4.2e-20 101.3 90 60.0
Sabra06G0074100 Salix brachista HOM05D007125 ORTHO05D008766 7.1e-20 100.5 72 68.1
MBI05_g03452_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 1.6e-19 99.4 83 60.2
Psat3g131480 Pisum sativum HOM05D007125 ORTHO05D008766 2.1e-19 99.0 90 60.0
Migut.J00225 Erythranthe guttata HOM05D007125 ORTHO05D008766 1.8e-18 95.9 88 55.7
PSO384G0252 Papaver somniferum HOM05D007125 ORTHO05D008766 1.9e-17 92.4 88 60.2
Mapoly0113s0048 Marchantia polymorpha HOM05D007125 ORTHO05D008766 4.1e-15 84.7 84 56.0
SMO358G0023 Selaginella moellendorffii HOM05D007125 ORTHO05D008766 5.3e-15 84.3 87 50.6
unitig_27.g24820 Utricularia gibba HOM05D007125 ORTHO05D008766 2.9e-13 78.6 76 51.3
Pp3c9_8840 Physcomitrium patens HOM05D007125 ORTHO05D008766 8.5e-13 77.0 91 45.1
AagrBONN_evm.TU.Sc2ySwM_228.1352 Anthoceros agrestis HOM05D007125 ORTHO05D008766 3.2e-12 75.1 87 51.7
MSTRG.19029 Avicennia marina HOM05D007125 ORTHO05D008766 7.2e-12 73.9 58 58.6
Pp3c3_16960 Physcomitrium patens HOM05D007125 ORTHO05D008766 2.7e-11 72.0 76 50.0
Glyma.07G144800 Glycine max HOM05D007125 ORTHO05D008766 2.4e-07 58.9 32 81.2


User provided reference genes

Program Settings