Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006362 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D033888 1.0e-54 216.5 105 100.0
CSS0004728 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D033888 1.3e-30 136.3 105 70.5
Lsat_1_v5_gn_4_37041 Lactuca sativa HOM05D000087 ORTHO05D005816 3.0e-19 98.6 69 66.7
Atru.BG.75.p Acer truncatum HOM05D000087 ORTHO05D005816 8.8e-19 97.1 69 66.7
Atru.chr5.419 Acer truncatum HOM05D000087 ORTHO05D005816 8.8e-19 97.1 69 66.7
CSS0012757 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005816 8.8e-19 97.1 69 68.1
Nitab4.5_0004973g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005816 1.5e-18 96.3 68 69.1
Nitab4.5_0005109g0030 Nicotiana tabacum HOM05D000087 ORTHO05D005816 1.5e-18 96.3 68 69.1
Aqoxy7G00407 Aquilegia oxysepala HOM05D000087 ORTHO05D005816 2.0e-18 95.9 51 80.4
BcaC04g24150 Brassica carinata HOM05D000087 ORTHO05D005816 2.0e-18 95.9 67 67.2
CSS0012718 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005816 2.0e-18 95.9 69 68.1
CSS0049644 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005816 2.0e-18 95.9 69 68.1
Ca_23744_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005816 2.0e-18 95.9 52 82.7
Cc02_g37370 Coffea canephora HOM05D000087 ORTHO05D005816 2.0e-18 95.9 51 82.4
Lalb_Chr10g0097441 Lupinus albus HOM05D000087 ORTHO05D005816 2.0e-18 95.9 51 82.4
Cpa.g.sc18.217 Carica papaya HOM05D000087 ORTHO05D005816 2.6e-18 95.5 69 65.2
DCAR_006909 Daucus carota HOM05D000087 ORTHO05D005816 2.6e-18 95.5 69 66.7
Dinv32429 Davidia involucrata HOM05D000087 ORTHO05D005816 2.6e-18 95.5 51 82.4
Lj7A518T105 Lonicera japonica HOM05D000087 ORTHO05D005816 2.6e-18 95.5 51 82.4
Oeu062013.1 Olea europaea HOM05D000087 ORTHO05D005816 2.6e-18 95.5 51 80.4
AL6G52730 Arabidopsis lyrata HOM05D000087 ORTHO05D005816 3.4e-18 95.1 67 67.2
AT4G00740 Arabidopsis thaliana HOM05D000087 ORTHO05D005816 3.4e-18 95.1 67 67.2
BcaC01g06860 Brassica carinata HOM05D000087 ORTHO05D005816 3.4e-18 95.1 67 67.2
C03p39050 Brassica napus HOM05D000087 ORTHO05D005816 3.4e-18 95.1 67 67.2
BolC3t16177H Brassica oleracea HOM05D000087 ORTHO05D005816 3.4e-18 95.1 67 67.2
BraA03t12375Z Brassica rapa HOM05D000087 ORTHO05D005816 3.4e-18 95.1 67 67.2
Carub.0006s3648 Capsella rubella HOM05D000087 ORTHO05D005816 3.4e-18 95.1 51 82.4
Ciclev10019404m.g Citrus clementina HOM05D000087 ORTHO05D005816 3.4e-18 95.1 69 65.2
Duzib138G0082 Durio zibethinus HOM05D000087 ORTHO05D005816 3.4e-18 95.1 51 82.4
Thhalv10028525m.g Eutrema salsugineum HOM05D000087 ORTHO05D005816 3.4e-18 95.1 67 67.2
Sp6g00720 Schrenkiella parvula HOM05D000087 ORTHO05D005816 3.4e-18 95.1 67 67.2
Sc23g0003200 Simmondsia chinensis HOM05D000087 ORTHO05D005816 3.4e-18 95.1 69 65.2
vmacro13331 Vaccinium macrocarpon HOM05D000087 ORTHO05D005816 3.4e-18 95.1 51 84.3
Actinidia32929 Actinidia chinensis HOM05D000087 ORTHO05D005816 4.4e-18 94.7 69 65.2
Aa31LG8G4330 Aethionema arabicum HOM05D000087 ORTHO05D005816 4.4e-18 94.7 67 65.7
arahy.Tifrunner.gnm1.ann1.26GYPH Arachis hypogaea HOM05D000087 ORTHO05D005816 4.4e-18 94.7 51 82.4
arahy.Tifrunner.gnm1.ann1.69QH8Z Arachis hypogaea HOM05D000087 ORTHO05D005816 4.4e-18 94.7 51 82.4
A09p00330 Brassica napus HOM05D000087 ORTHO05D005816 4.4e-18 94.7 67 65.7
BraA09t35728Z Brassica rapa HOM05D000087 ORTHO05D005816 4.4e-18 94.7 67 65.7
ECA234G1945 Erigeron canadensis HOM05D003871 ORTHO05D005816 4.4e-18 94.7 69 65.2
Migut.B01701 Erythranthe guttata HOM05D000087 ORTHO05D005816 4.4e-18 94.7 69 65.2
Glyma.18G225900 Glycine max HOM05D000087 ORTHO05D005816 4.4e-18 94.7 69 65.2
Gohir.A11G085700 Gossypium hirsutum HOM05D000087 ORTHO05D005816 4.4e-18 94.7 69 66.7
Gohir.D08G043800 Gossypium hirsutum HOM05D000087 ORTHO05D005816 4.4e-18 94.7 51 80.4
Gohir.D11G089900 Gossypium hirsutum HOM05D000087 ORTHO05D005816 4.4e-18 94.7 69 66.7
Gorai.004G042500 Gossypium raimondii HOM05D000087 ORTHO05D005816 4.4e-18 94.7 51 80.4
Gorai.007G095900 Gossypium raimondii HOM05D000087 ORTHO05D005816 4.4e-18 94.7 69 66.7
Rhsim07G0020400 Rhododendron simsii HOM05D000087 ORTHO05D005816 4.4e-18 94.7 51 82.4
MELO3C006141.2 Cucumis melo HOM05D000087 ORTHO05D005816 5.7e-18 94.4 69 65.2
CsaV3_3G009210 Cucumis sativus L. HOM05D000087 ORTHO05D005816 5.7e-18 94.4 69 65.2
Nn6g34221 Nelumbo nucifera HOM05D000087 ORTHO05D005816 5.7e-18 94.4 51 78.4
Phvul.010G090400 Phaseolus vulgaris HOM05D000087 ORTHO05D005816 5.7e-18 94.4 51 82.4
TWI14G1285 Tripterygium wilfordii HOM05D000087 ORTHO05D005816 5.7e-18 94.4 69 65.2
MSTRG.20802 Avicennia marina HOM05D000087 ORTHO05D005816 7.5e-18 94.0 51 78.4
A03p32030 Brassica napus HOM05D000087 ORTHO05D005816 7.5e-18 94.0 67 67.2
PGR042G0107 Punica granatum HOM05D000087 ORTHO05D005816 7.5e-18 94.0 69 65.2
THA.LOC104806188 Tarenaya hassleriana HOM05D000087 ORTHO05D005816 7.5e-18 94.0 67 65.7
CAN.G170.25 Capsicum annuum HOM05D000087 ORTHO05D005816 9.8e-18 93.6 69 65.2
Dinv43766 Davidia involucrata HOM05D000087 ORTHO05D005816 9.8e-18 93.6 68 67.6
Duzib133G0013 Durio zibethinus HOM05D000087 ORTHO05D005816 9.8e-18 93.6 69 65.2
Eucgr.E00210 Eucalyptus grandis HOM05D000087 ORTHO05D005816 9.8e-18 93.6 69 65.2
PGSC0003DMG400027769 Solanum tuberosum HOM05D000087 ORTHO05D005816 9.8e-18 93.6 51 80.4
TAR629G2403 Trochodendron aralioides HOM05D000087 ORTHO05D005816 9.8e-18 93.6 51 78.4
CiPaw.02G026200 Carya illinoinensis HOM05D000087 ORTHO05D005816 1.3e-17 93.2 69 63.8
COL.COLO4_12613 Corchorus olitorius HOM05D000087 ORTHO05D005816 1.3e-17 93.2 69 65.2
Glyma.09G265000 Glycine max HOM05D000087 ORTHO05D005816 1.3e-17 93.2 69 65.2
Lj3g0013922 Lotus japonicus HOM05D000087 ORTHO05D005816 1.3e-17 93.2 69 65.2
Lalb_Chr04g0256651 Lupinus albus HOM05D000087 ORTHO05D005816 1.3e-17 93.2 51 82.4
Peaxi162Scf00021g00921 Petunia axillaris HOM05D000087 ORTHO05D005816 1.3e-17 93.2 69 65.2
Phvul.008G072600 Phaseolus vulgaris HOM05D000087 ORTHO05D005816 1.3e-17 93.2 69 65.2
Sed0014965 Sechium edule HOM05D000087 ORTHO05D005816 1.3e-17 93.2 69 65.2
arahy.Tifrunner.gnm1.ann1.36HCF2 Arachis hypogaea HOM05D000087 ORTHO05D005816 1.7e-17 92.8 51 82.4
arahy.Tifrunner.gnm1.ann1.LJ9V8V Arachis hypogaea HOM05D000087 ORTHO05D005816 1.7e-17 92.8 51 82.4
Glyma.07G077000 Glycine max HOM05D000087 ORTHO05D005816 1.7e-17 92.8 51 80.4
HanXRQChr16g0523651 Helianthus annuus HOM05D000087 ORTHO05D005816 1.7e-17 92.8 67 65.7
MBI04_g00310_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005816 1.7e-17 92.8 51 80.4
SalBow3G3525 Salvia bowleyana HOM05D000087 ORTHO05D005816 1.7e-17 92.8 70 64.3
Thecc.01G366800 Theobroma cacao HOM05D000087 ORTHO05D005816 1.7e-17 92.8 69 65.2
VMungo0331G0227 Vigna mungo HOM05D000087 ORTHO05D005816 1.7e-17 92.8 51 80.4
Ca_23739_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005816 2.2e-17 92.4 51 80.4
Gohir.A08G033100 Gossypium hirsutum HOM05D000087 ORTHO05D005816 2.2e-17 92.4 69 63.8
TAR374G0449 Trochodendron aralioides HOM05D000087 ORTHO05D005816 2.2e-17 92.4 51 76.5
CARHR248910 Cardamine hirsuta HOM05D000087 ORTHO05D005816 2.8e-17 92.0 67 65.7
Cfa004198 Carpinus fangiana HOM05D000087 ORTHO05D005816 2.8e-17 92.0 69 65.2
Haze_15211 Corylus avellana HOM05D000087 ORTHO05D005816 2.8e-17 92.0 69 65.2
Hma1.2p1_0001F.1_g001820 Hydrangea macrophylla HOM05D000087 ORTHO05D005816 2.8e-17 92.0 69 63.8
Psat4g151920 Pisum sativum HOM05D000087 ORTHO05D005816 2.8e-17 92.0 51 78.4
Solyc01g091640.3 Solanum lycopersicum HOM05D000087 ORTHO05D005816 2.8e-17 92.0 51 78.4
Sopen01g037410 Solanum pennellii HOM05D000087 ORTHO05D005816 2.8e-17 92.0 51 78.4
SGA_v2.0_scaffold153G37077 Striga asiatica HOM05D000087 ORTHO05D005816 2.8e-17 92.0 69 63.8
TPR.G17599 Trifolium pratense HOM05D000087 ORTHO05D005816 2.8e-17 92.0 69 62.3
C09p00590 Brassica napus HOM05D000087 ORTHO05D005816 3.7e-17 91.7 67 64.2
BolC9t52993H Brassica oleracea HOM05D000087 ORTHO05D005816 3.7e-17 91.7 67 64.2
ClCG05G001820 Citrullus lanatus HOM05D000087 ORTHO05D005816 3.7e-17 91.7 69 63.8
Manes.01G261400 Manihot esculenta HOM05D000087 ORTHO05D005816 3.7e-17 91.7 69 65.2
Glyma.03G016700 Glycine max HOM05D000087 ORTHO05D005816 4.8e-17 91.3 51 78.4
Sabra14G0056400 Salix brachista HOM05D000087 ORTHO05D005816 1.1e-16 90.1 51 78.4
EL10Ac1g00509 Beta vulgaris HOM05D000087 ORTHO05D005816 1.4e-16 89.7 69 63.8
MD01G1050300 Malus domestica HOM05D000087 ORTHO05D005816 1.8e-16 89.4 69 62.3
Medtr8g432620 Medicago truncatula HOM05D000087 ORTHO05D005816 1.8e-16 89.4 69 62.3
PSO782G3056 Papaver somniferum HOM05D000087 ORTHO05D005816 1.8e-16 89.4 51 76.5
CANSAT56G2092 Cannabis sativa HOM05D000087 ORTHO05D005816 2.4e-16 89.0 51 76.5
QL08p050251 Quercus lobata HOM05D000087 ORTHO05D005816 2.4e-16 89.0 69 62.3
Potri.014G075300 Populus trichocarpa HOM05D000087 ORTHO05D005816 3.1e-16 88.6 51 76.5
GSVIVG01027509001 Vitis vinifera HOM05D000087 ORTHO05D005816 3.1e-16 88.6 69 62.3
Gorai.004G156600 Gossypium raimondii HOM05D000087 ORTHO05D005816 4.1e-16 88.2 51 72.5
Lj1g0003074 Lotus japonicus HOM05D000087 ORTHO05D005816 4.1e-16 88.2 51 74.5
MD07G1127700 Malus domestica HOM05D000087 ORTHO05D005816 4.1e-16 88.2 69 60.9
Prupe.2G156800 Prunus persica HOM05D000087 ORTHO05D005816 4.1e-16 88.2 69 62.3
VMungo1383G0441 Vigna mungo HOM05D000087 ORTHO05D005816 4.1e-16 88.2 69 62.3
CiPaw.01G055000 Carya illinoinensis HOM05D000087 ORTHO05D005816 5.4e-16 87.8 69 59.4
AUR62004301 Chenopodium quinoa HOM05D000087 ORTHO05D005816 5.4e-16 87.8 69 60.9
AUR62022750 Chenopodium quinoa HOM05D000087 ORTHO05D005816 5.4e-16 87.8 69 60.9
Ca_07857_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005816 5.4e-16 87.8 51 74.5
Medtr7g076150 Medicago truncatula HOM05D000087 ORTHO05D005816 5.4e-16 87.8 52 73.1
Sed0002717 Sechium edule HOM05D000087 ORTHO05D005816 5.4e-16 87.8 51 78.4
ATR0757G209 Amborella trichopoda HOM05D000087 ORTHO05D005816 9.1e-16 87.0 51 74.5
FvH4_7g13340 Fragaria vesca HOM05D000087 ORTHO05D005816 9.1e-16 87.0 69 60.9
FAN01G3003 Fragaria x ananassa HOM05D000087 ORTHO05D005816 9.1e-16 87.0 69 60.9
FAN03G1269 Fragaria x ananassa HOM05D000087 ORTHO05D005816 9.1e-16 87.0 69 60.9
FAN06G1530 Fragaria x ananassa HOM05D000087 ORTHO05D005816 9.1e-16 87.0 69 60.9
FAN06G2965 Fragaria x ananassa HOM05D000087 ORTHO05D005816 9.1e-16 87.0 69 60.9
FAN10G2094 Fragaria x ananassa HOM05D000087 ORTHO05D005816 9.1e-16 87.0 69 60.9
FAN10G2481 Fragaria x ananassa HOM05D000087 ORTHO05D005816 9.1e-16 87.0 69 60.9
PSO063G1365 Papaver somniferum HOM05D000087 ORTHO05D005816 9.1e-16 87.0 49 77.6
Hund16956 Selenicereus undatus HOM05D000087 ORTHO05D005816 9.1e-16 87.0 51 72.5
unitig_26.g9729 Utricularia gibba HOM05D000087 ORTHO05D005816 9.1e-16 87.0 69 56.5
Lalb_Chr17g0339981 Lupinus albus HOM05D000087 ORTHO05D005816 1.2e-15 86.7 51 76.5
Ah.05g176150 Amaranthus hybridus HOM05D000087 ORTHO05D005816 1.6e-15 86.3 51 74.5
Oeu058610.1 Olea europaea HOM05D000087 ORTHO05D005816 2.0e-15 85.9 51 70.6
RcHm_v2.0_Chr1g0352661 Rosa chinensis HOM05D000087 ORTHO05D005816 2.0e-15 85.9 51 72.5
CDE12G0174 Ceratophyllum demersum HOM05D000087 ORTHO05D005816 3.5e-15 85.1 51 76.5
Eucgr.D02247 Eucalyptus grandis HOM05D000087 ORTHO05D005816 3.5e-15 85.1 51 70.6
Psat3g113720 Pisum sativum HOM05D000087 ORTHO05D005816 3.5e-15 85.1 69 58.0
TPR.G37797 Trifolium pratense HOM05D000087 ORTHO05D005816 4.5e-15 84.7 51 72.5
Gohir.D08G150900 Gossypium hirsutum HOM05D000087 ORTHO05D005816 5.9e-15 84.3 51 70.6
Hund27316 Selenicereus undatus HOM05D000087 ORTHO05D005816 7.7e-15 84.0 51 68.6
MBI12_g15162_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005816 1.7e-14 82.8 49 69.4
CDE11G0250 Ceratophyllum demersum HOM05D000087 ORTHO05D005816 2.9e-14 82.0 49 71.4
Lsat_1_v5_gn_7_5621 Lactuca sativa HOM05D000087 ORTHO05D005816 2.9e-14 82.0 54 64.8
CDE04G0571 Ceratophyllum demersum HOM05D000087 ORTHO05D003116 6.5e-14 80.9 51 74.5
HanXRQChr04g0121901 Helianthus annuus HOM05D000087 ORTHO05D005816 1.9e-13 79.3 51 68.6
HPP92_025953 Vanilla planifolia HOM05D000087 ORTHO05D005816 3.2e-13 78.6 51 64.7
ECA236G2942 Erigeron canadensis HOM05D000087 ORTHO05D005816 5.5e-13 77.8 51 66.7
SEGI_11501 Sequoiadendron giganteum HOM05D000087 ORTHO05D005816 9.5e-13 77.0 49 63.3
Os04g0569400 Oryza sativa ssp. japonica HOM05D000087 ORTHO05D005816 2.7e-12 75.5 51 60.8
Zm00001eb073670 Zea mays HOM05D000087 ORTHO05D005816 8.8e-11 70.5 51 56.9
Actinidia38297 Actinidia chinensis HOM05D000087 ORTHO05D005816 1.2e-10 70.1 40 80.0
PGR031G2012 Punica granatum HOM05D000087 ORTHO05D005816 8.3e-09 63.9 51 52.9
Nn3g19187 Nelumbo nucifera HOM05D000087 ORTHO05D033888 1.8e-08 62.8 35 77.1
SMO367G1231 Selaginella moellendorffii HOM05D000087 ORTHO05D005816 1.2e-07 60.1 51 45.1
CBR_g41788 Chara braunii HOM05D000087 ORTHO05D000439 1.3e-06 56.6 63 41.3
CBR_g31239 Chara braunii HOM05D000087 ORTHO05D000439 5.0e-06 54.7 63 38.1
Lj8C27T9 Lonicera japonica HOM05D000087 ORTHO05D000439 5.0e-06 54.7 61 41.0
AUR62016020 Chenopodium quinoa HOM05D000087 ORTHO05D000439 6.6e-06 54.3 93 33.3


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