Gene: AL6G52730

General Information

Structural Information

Species Arabidopsis lyrata
Gene Identifier AL6G52730
Transcript Identifier AL6G52730.t1
Gene Type Coding gene
Location scaffold_6 : 24689607-24692174 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000087
#Genes/#Species 3607/99
Phylogenetic origin

ID ORTHO05D005816
#Genes/#Species 151/94
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id AL6G52730.v2.1
synonym fgenesh2_kg.6__3629__AT4G00740.1
pacid 35928479

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0052546	ISO	PLAZA Integrative Orthology	cell wall pectin metabolic process	AT4G00740
GO:0042546	ISO	PLAZA Integrative Orthology	cell wall biogenesis	AT4G00740

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008168	IEA	InterPro	methyltransferase activity
GO:0008757	ISO	PLAZA Integrative Orthology	S-adenosylmethionine-dependent methyltransferase activity	AT4G00740

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005802	ISO	PLAZA Integrative Orthology	trans-Golgi network	AT4G00740
GO:0005768	ISO	PLAZA Integrative Orthology	endosome	AT4G00740
GO:0016020	ISO	PLAZA Integrative Orthology	membrane	AT4G00740
GO:0016021	ISO	PLAZA Integrative Orthology	integral component of membrane	AT4G00740
GO:0005794	ISO	PLAZA Integrative Orthology	Golgi apparatus	AT4G00740
GO:0000139	ISO	PLAZA Integrative Orthology	Golgi membrane	AT4G00740

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR004159	Putative S-adenosyl-L-methionine-dependent methyltransferase
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase

Mapman id	Description
21.3.1.1.2	Cell wall organisation.pectin.homogalacturonan.biosynthesis.methyltransferase (QUA)