Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 3.2e-104 381.7 189 100.0
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 1.6e-82 309.7 187 82.9
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 2.7e-82 308.9 183 84.7
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 1.0e-81 307.0 187 83.4
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 2.3e-78 295.8 186 78.5
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 2.3e-78 295.8 186 79.0
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 3.0e-78 295.4 186 79.0
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 1.5e-77 293.1 186 79.0
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 9.8e-77 290.4 186 78.5
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 1.3e-76 290.0 186 79.0
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 1.7e-76 289.7 185 78.9
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 2.8e-76 288.9 186 78.0
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 3.7e-76 288.5 185 76.8
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 3.7e-76 288.5 185 78.4
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 1.8e-75 286.2 185 79.5
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 1.8e-75 286.2 186 77.4
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 2.4e-75 285.8 181 77.3
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 5.4e-75 284.6 186 78.5
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 5.4e-75 284.6 186 78.5
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 1.2e-74 283.5 181 77.3
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 1.2e-74 283.5 180 77.8
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.2e-74 283.5 185 77.3
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 1.6e-74 283.1 183 77.6
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 2.0e-74 282.7 186 75.8
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 2.0e-74 282.7 186 76.3
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 3.5e-74 282.0 186 77.4
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 4.5e-74 281.6 185 76.2
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 4.5e-74 281.6 184 76.1
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 4.5e-74 281.6 184 76.1
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 5.9e-74 281.2 180 77.2
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 5.9e-74 281.2 181 76.8
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 7.8e-74 280.8 186 76.9
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 2.9e-73 278.9 182 78.0
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 2.9e-73 278.9 176 77.3
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 5.0e-73 278.1 179 75.4
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 6.6e-73 277.7 185 75.1
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 6.6e-73 277.7 174 77.6
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 8.6e-73 277.3 179 77.1
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 8.6e-73 277.3 181 76.8
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 8.6e-73 277.3 187 73.3
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 1.1e-72 276.9 181 74.6
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.9e-72 276.2 180 77.2
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 1.9e-72 276.2 182 73.6
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 3.3e-72 275.4 184 75.0
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 3.3e-72 275.4 179 77.7
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 5.6e-72 274.6 181 75.1
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 7.3e-72 274.2 181 76.2
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 2.8e-71 272.3 166 81.9
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 4.7e-71 271.6 214 68.2
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 8.0e-71 270.8 180 73.3
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 1.4e-70 270.0 181 73.5
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.8e-70 269.6 169 78.7
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 1.8e-70 269.6 171 77.2
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 2.3e-70 269.2 179 74.3
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 3.1e-70 268.9 180 75.0
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 3.1e-70 268.9 172 74.4
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 4.0e-70 268.5 169 78.1
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 6.8e-70 267.7 185 71.9
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 1.5e-69 266.5 169 78.1
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 2.6e-69 265.8 175 74.3
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 3.4e-69 265.4 182 73.6
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 4.4e-69 265.0 186 72.6
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 4.4e-69 265.0 186 72.6
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 4.4e-69 265.0 161 81.4
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 4.4e-69 265.0 182 72.5
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 5.8e-69 264.6 170 77.1
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 1.3e-68 263.5 179 72.6
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.3e-68 263.5 178 72.5
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.3e-68 263.5 181 72.4
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 2.2e-68 262.7 178 72.5
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 2.2e-68 262.7 178 72.5
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 2.2e-68 262.7 178 72.5
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 2.2e-68 262.7 168 75.0
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 2.2e-68 262.7 168 78.0
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 4.9e-68 261.5 181 71.8
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 6.4e-68 261.2 176 72.7
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 1.4e-67 260.0 179 71.5
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 7.0e-67 257.7 179 71.5
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 9.2e-67 257.3 188 68.6
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 2.7e-66 255.8 180 71.7
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 2.7e-66 255.8 171 73.7
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 3.5e-66 255.4 175 72.0
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 7.8e-66 254.2 180 72.2
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 1.0e-65 253.8 177 71.8
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 1.7e-65 253.1 175 71.4
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 3.9e-65 251.9 198 69.2
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 9.5e-64 247.3 179 69.3
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.6e-63 246.5 188 70.2
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 6.2e-63 244.6 160 76.9
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 8.0e-63 244.2 176 67.6
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 2.3e-62 242.7 184 66.8
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 1.4e-59 233.4 213 57.7
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 1.6e-58 229.9 169 66.3
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 4.3e-56 221.9 170 65.9
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 1.1e-54 217.2 176 62.5
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.5e-53 213.4 181 64.1
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 1.5e-53 213.4 157 68.8
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 4.9e-52 208.4 185 62.7
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 4.3e-48 195.3 131 71.0
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 6.2e-47 191.4 131 76.3
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 3.1e-46 189.1 116 80.2
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 6.8e-46 188.0 157 63.7
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 2.6e-45 186.0 126 69.8
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 4.6e-42 175.3 114 73.7
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 6.0e-42 174.9 116 73.3
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 1.5e-40 170.2 112 78.6
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 1.9e-40 169.9 114 71.9
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 5.6e-40 168.3 114 71.9
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 9.6e-40 167.5 181 50.8
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 8.1e-39 164.5 106 77.4
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 4.0e-38 162.2 179 49.7
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 3.8e-36 155.6 107 74.8
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 2.7e-34 149.4 109 68.8
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 6.4e-20 101.7 188 36.7
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 2.4e-14 83.2 51 78.4
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 4.5e-13 79.0 63 66.7
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 8.4e-12 74.7 180 30.0
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 1.4e-11 73.9 194 27.3
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 1.2e-10 70.9 179 27.9
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 2.8e-07 59.7 63 49.2
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 8.2e-07 58.2 60 55.0
AagrBONN_evm.TU.Sc2ySwM_340.195 Anthoceros agrestis HOM05D006649 ORTHO05D023509 3.1e-06 56.2 96 34.4


User provided reference genes

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