Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 6.3e-70 267.3 135 100.0
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 2.4e-61 238.8 110 91.8
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 7.8e-60 233.8 110 90.0
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 5.6e-58 227.6 110 84.5
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.4e-56 223.0 110 82.7
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 1.4e-56 223.0 110 86.4
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.0e-56 221.5 110 81.8
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 8.9e-56 220.3 110 80.9
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 1.2e-55 219.9 110 84.5
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 1.2e-55 219.9 107 83.2
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 2.0e-55 219.2 129 72.1
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 2.0e-55 219.2 110 80.0
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 3.4e-55 218.4 129 71.3
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 5.8e-55 217.6 110 79.1
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 5.8e-55 217.6 107 82.2
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 5.8e-55 217.6 107 82.2
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 7.5e-55 217.2 110 81.8
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 9.8e-55 216.9 107 82.2
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 1.3e-54 216.5 129 78.3
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 1.3e-54 216.5 129 78.3
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 1.3e-54 216.5 129 78.3
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 1.3e-54 216.5 129 78.3
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 1.3e-54 216.5 129 78.3
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 2.2e-54 215.7 110 81.8
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.9e-54 215.3 110 80.9
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 3.7e-54 214.9 110 82.7
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 1.4e-53 213.0 110 79.1
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 1.4e-53 213.0 110 80.9
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 1.9e-53 212.6 129 78.3
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 1.9e-53 212.6 110 80.0
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 3.2e-53 211.8 106 82.1
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 3.2e-53 211.8 106 82.1
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 3.2e-53 211.8 110 79.1
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 4.1e-53 211.5 110 80.0
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 7.0e-53 210.7 109 81.7
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 9.2e-53 210.3 118 78.8
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 1.2e-52 209.9 104 82.7
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 1.2e-52 209.9 104 82.7
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 1.2e-52 209.9 110 78.2
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 1.2e-52 209.9 110 76.4
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 1.6e-52 209.5 106 82.1
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 2.0e-52 209.1 110 76.4
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 2.0e-52 209.1 110 76.4
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 3.5e-52 208.4 104 81.7
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 3.5e-52 208.4 110 77.3
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 1.3e-51 206.5 110 78.2
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.3e-51 206.5 108 80.6
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.7e-51 206.1 111 78.4
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.7e-51 206.1 111 78.4
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 1.7e-51 206.1 111 78.4
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 1.7e-51 206.1 104 81.7
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 3.0e-51 205.3 109 78.0
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 3.0e-51 205.3 110 76.4
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 3.9e-51 204.9 109 75.2
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 5.0e-51 204.5 110 76.4
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 6.6e-51 204.1 105 77.1
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 1.5e-50 203.0 110 76.4
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 2.5e-50 202.2 132 67.4
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 5.6e-50 201.1 129 69.8
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 7.3e-50 200.7 110 74.5
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 9.5e-50 200.3 110 75.5
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.2e-49 199.9 110 73.6
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 1.6e-49 199.5 102 80.4
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 2.1e-49 199.1 106 74.5
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 2.1e-49 199.1 110 74.5
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 3.6e-49 198.4 102 80.4
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 3.6e-49 198.4 110 76.4
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 3.6e-49 198.4 142 64.1
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 4.7e-49 198.0 110 74.5
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 8.1e-49 197.2 107 72.9
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 1.8e-48 196.1 110 74.5
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 3.1e-48 195.3 110 71.8
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 5.2e-48 194.5 107 72.0
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 6.8e-48 194.1 110 70.9
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 1.2e-47 193.4 106 73.6
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.2e-47 193.4 118 69.5
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 2.0e-47 192.6 150 57.3
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.6e-47 192.2 106 73.6
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 3.4e-47 191.8 110 74.5
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 4.4e-47 191.4 125 66.4
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 9.8e-47 190.3 107 71.0
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 1.7e-46 189.5 107 71.0
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 1.9e-45 186.0 110 71.8
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.9e-45 186.0 109 67.0
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 3.2e-45 185.3 109 67.0
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 1.2e-44 183.3 109 67.9
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 2.1e-44 182.6 107 65.4
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.5e-44 181.8 122 63.9
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 3.5e-44 181.8 111 66.7
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 3.9e-43 178.3 91 81.3
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 1.5e-42 176.4 151 55.0
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 1.9e-42 176.0 131 60.3
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 3.3e-42 175.3 114 75.4
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 2.1e-41 172.6 104 65.4
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.1e-40 170.2 110 64.5
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 1.8e-40 169.5 110 70.0
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 2.3e-40 169.1 109 57.8
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 1.2e-39 166.8 84 81.0
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.2e-39 166.8 110 65.5
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 5.8e-39 164.5 78 88.5
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 5.8e-39 164.5 110 64.5
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 1.2e-36 156.8 84 76.2
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 1.7e-35 152.9 94 64.9
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 6.6e-35 151.0 117 61.5
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 8.6e-35 150.6 78 76.9
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.8e-32 142.9 90 72.2
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.5e-31 139.8 84 70.2
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.1e-29 133.7 91 71.4
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 2.1e-28 129.4 66 81.8
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 2.7e-28 129.0 66 80.3
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 5.1e-27 124.8 66 81.8
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 2.5e-26 122.5 66 75.8
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 2.5e-26 122.5 66 75.8
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 1.3e-25 120.2 75 68.0
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 4.0e-24 115.2 66 75.8
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 9.0e-24 114.0 63 77.8
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 1.7e-22 109.8 93 48.4
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 3.6e-17 92.0 66 54.5
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 6.2e-17 91.3 59 61.0
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.3e-11 73.6 32 93.8
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 6.7e-11 71.2 38 78.9
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 1.3e-09 67.0 32 84.4
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 1.1e-08 63.9 29 79.3
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 6.9e-08 61.2 35 62.9


User provided reference genes

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