Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006068 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 1.8e-176 622.5 309 100.0
CSS0037380 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 1.3e-38 164.5 178 55.1
Dinv44275 Davidia involucrata HOM05D004725 ORTHO05D005683 2.5e-37 160.2 186 53.8
CSS0018454 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 1.6e-36 157.5 178 53.4
Dinv15152 Davidia involucrata HOM05D004725 ORTHO05D005683 3.6e-36 156.4 198 51.0
Oeu001165.1 Olea europaea HOM05D004725 ORTHO05D005683 2.9e-33 146.7 173 52.6
vmacro08028 Vaccinium macrocarpon HOM05D004725 ORTHO05D005683 2.9e-33 146.7 184 51.1
Cc00_g03440 Coffea canephora HOM05D004725 ORTHO05D005683 2.7e-31 140.2 168 50.0
Lsat_1_v5_gn_8_139661 Lactuca sativa HOM05D004725 ORTHO05D005683 3.5e-31 139.8 177 49.7
Actinidia31555 Actinidia chinensis HOM05D004725 ORTHO05D005683 4.6e-31 139.4 187 48.1
Migut.G00073 Erythranthe guttata HOM05D004725 ORTHO05D005683 4.6e-31 139.4 178 50.0
Peaxi162Scf00057g02232 Petunia axillaris HOM05D004725 ORTHO05D005683 1.7e-30 137.5 180 47.8
Nn3g21748 Nelumbo nucifera HOM05D004725 ORTHO05D005683 2.3e-30 137.1 177 46.9
Oeu038772.1 Olea europaea HOM05D004725 ORTHO05D005683 6.6e-30 135.6 177 49.7
GSVIVG01034975001 Vitis vinifera HOM05D004725 ORTHO05D005683 5.6e-29 132.5 177 48.6
MSTRG.3853 Avicennia marina HOM05D004725 ORTHO05D005683 7.3e-29 132.1 178 48.9
HanXRQChr10g0291591 Helianthus annuus HOM05D004725 ORTHO05D005683 7.3e-29 132.1 169 48.5
HanXRQChr17g0554971 Helianthus annuus HOM05D004725 ORTHO05D005683 3.6e-28 129.8 169 47.9
Glyma.07G011200 Glycine max HOM05D004725 ORTHO05D005683 4.7e-28 129.4 173 45.1
Rhsim04G0240300 Rhododendron simsii HOM05D004725 ORTHO05D005683 4.7e-28 129.4 276 35.5
SGA_v2.0_scaffold157G37322 Striga asiatica HOM05D004725 ORTHO05D005683 8.1e-28 128.6 178 46.1
SalBow8G1743 Salvia bowleyana HOM05D004725 ORTHO05D005683 1.1e-27 128.3 178 47.2
Glyma.08G194400 Glycine max HOM05D004725 ORTHO05D005683 1.4e-27 127.9 189 45.0
Medtr2g044210 Medicago truncatula HOM05D004725 ORTHO05D005683 1.4e-27 127.9 169 45.6
Phvul.010G140100 Phaseolus vulgaris HOM05D004725 ORTHO05D005683 1.8e-27 127.5 171 46.2
ECA236G4776 Erigeron canadensis HOM05D004725 ORTHO05D005683 3.1e-27 126.7 178 46.1
TAR376G0735 Trochodendron aralioides HOM05D004725 ORTHO05D005683 4.0e-27 126.3 181 45.9
DCAR_030461 Daucus carota HOM05D004725 ORTHO05D005683 5.2e-27 125.9 175 46.9
CANSAT35G1772 Cannabis sativa HOM05D004725 ORTHO05D005683 8.9e-27 125.2 177 45.8
Ciclev10005849m.g Citrus clementina HOM05D004725 ORTHO05D005683 8.9e-27 125.2 168 45.2
Lj3A833G37 Lonicera japonica HOM05D004725 ORTHO05D005683 8.9e-27 125.2 87 72.4
Lj3g0003769 Lotus japonicus HOM05D004725 ORTHO05D005683 8.9e-27 125.2 169 44.4
TPR.G27119 Trifolium pratense HOM05D004725 ORTHO05D005683 8.9e-27 125.2 180 43.9
QL06p012630 Quercus lobata HOM05D004725 ORTHO05D005683 1.2e-26 124.8 174 45.4
CAN.G598.3 Capsicum annuum HOM05D004725 ORTHO05D005683 1.5e-26 124.4 87 69.0
Nitab4.5_0002789g0040 Nicotiana tabacum HOM05D004725 ORTHO05D005683 1.5e-26 124.4 87 67.8
RcHm_v2.0_Chr4g0425721 Rosa chinensis HOM05D004725 ORTHO05D005683 2.6e-26 123.6 189 45.0
Haze_01314 Corylus avellana HOM05D004725 ORTHO05D005683 5.8e-26 122.5 167 46.1
Solyc11g065900.2 Solanum lycopersicum HOM05D004725 ORTHO05D005683 5.8e-26 122.5 87 67.8
Sopen11g025640 Solanum pennellii HOM05D004725 ORTHO05D005683 5.8e-26 122.5 87 67.8
PGSC0003DMG400007347 Solanum tuberosum HOM05D004725 ORTHO05D005683 5.8e-26 122.5 87 67.8
Potri.008G103800 Populus trichocarpa HOM05D004725 ORTHO05D005683 7.5e-26 122.1 173 45.1
VMungo0331G0107 Vigna mungo HOM05D004725 ORTHO05D005683 9.8e-26 121.7 162 47.5
FvH4_4g13700 Fragaria vesca HOM05D004725 ORTHO05D005683 1.3e-25 121.3 181 45.9
CiPaw.02G073900 Carya illinoinensis HOM05D004725 ORTHO05D005683 1.7e-25 120.9 173 46.2
arahy.Tifrunner.gnm1.ann1.ASV3U0 Arachis hypogaea HOM05D004725 ORTHO05D005683 2.2e-25 120.6 196 41.3
Actinidia18458 Actinidia chinensis HOM05D004725 ORTHO05D005683 2.9e-25 120.2 73 80.8
Rhsim05G0134600 Rhododendron simsii HOM05D004725 ORTHO05D005683 3.7e-25 119.8 84 69.0
arahy.Tifrunner.gnm1.ann1.NMZ4WG Arachis hypogaea HOM05D004725 ORTHO05D005683 4.9e-25 119.4 196 40.8
Nitab4.5_0000160g0190 Nicotiana tabacum HOM05D004725 ORTHO05D005683 4.9e-25 119.4 87 67.8
Eucgr.D00314 Eucalyptus grandis HOM05D004725 ORTHO05D005683 1.4e-24 117.9 180 45.6
PSO782G1146 Papaver somniferum HOM05D004725 ORTHO05D005683 1.4e-24 117.9 172 44.2
Sabra08G0078400 Salix brachista HOM05D004725 ORTHO05D005683 2.4e-24 117.1 175 42.9
Manes.03G206000 Manihot esculenta HOM05D004725 ORTHO05D005683 3.2e-24 116.7 170 44.1
Psat1g138600 Pisum sativum HOM05D004725 ORTHO05D005683 4.1e-24 116.3 87 66.7
Lalb_Chr20g0110441 Lupinus albus HOM05D004725 ORTHO05D005683 7.1e-24 115.5 165 45.5
unitig_37.g12782 Utricularia gibba HOM05D004725 ORTHO05D005683 7.1e-24 115.5 163 46.0
Prupe.1G115500 Prunus persica HOM05D004725 ORTHO05D005683 9.2e-24 115.2 167 45.5
Ca_09654_v3 Cicer arietinum L. HOM05D004725 ORTHO05D005683 1.2e-23 114.8 147 49.0
MBI18_g03518_MAGBIO Magnolia biondii HOM05D004725 ORTHO05D005683 2.1e-23 114.0 163 47.2
Sc25g0003230 Simmondsia chinensis HOM05D004725 ORTHO05D005683 2.1e-23 114.0 208 41.3
FAN07G1636 Fragaria x ananassa HOM05D004725 ORTHO05D005683 3.5e-23 113.2 87 66.7
Gorai.011G201500 Gossypium raimondii HOM05D004725 ORTHO05D005683 3.5e-23 113.2 177 43.5
COL.COLO4_34597 Corchorus olitorius HOM05D004725 ORTHO05D005683 4.6e-23 112.8 169 44.4
Gohir.A10G173400 Gossypium hirsutum HOM05D004725 ORTHO05D005683 4.6e-23 112.8 180 43.3
Os05g0143400 Oryza sativa ssp. japonica HOM05D004725 ORTHO05D005683 4.6e-23 112.8 154 46.1
Atru.chr4.3042 Acer truncatum HOM05D004725 ORTHO05D005683 6.0e-23 112.5 172 43.6
Carub.0008s0897 Capsella rubella HOM05D004725 ORTHO05D005683 6.0e-23 112.5 168 42.9
FAN22G2356 Fragaria x ananassa HOM05D004725 ORTHO05D005683 7.8e-23 112.1 79 72.2
Thecc.04G302700 Theobroma cacao HOM05D004725 ORTHO05D005683 7.8e-23 112.1 180 43.3
Aqoxy6G02121 Aquilegia oxysepala HOM05D004725 ORTHO05D005683 1.7e-22 110.9 87 65.5
CDE02G0725 Ceratophyllum demersum HOM05D004725 ORTHO05D005683 1.7e-22 110.9 168 45.2
Ca_02282_v3 Cicer arietinum L. HOM05D004725 ORTHO05D005683 1.7e-22 110.9 149 47.7
THA.LOC104827096 Tarenaya hassleriana HOM05D004725 ORTHO05D005683 1.7e-22 110.9 168 43.5
BcaC06g30731 Brassica carinata HOM05D004725 ORTHO05D005683 2.3e-22 110.5 165 44.2
Carub.0008s0882 Capsella rubella HOM05D004725 ORTHO05D005683 2.3e-22 110.5 168 42.3
FAN12G0673 Fragaria x ananassa HOM05D004725 ORTHO05D005683 2.3e-22 110.5 171 45.6
Gohir.D10G179900 Gossypium hirsutum HOM05D004725 ORTHO05D005683 2.3e-22 110.5 180 42.8
TWI09G0594 Tripterygium wilfordii HOM05D004725 ORTHO05D005683 3.0e-22 110.2 87 64.4
GSVIVG01034912001 Vitis vinifera HOM05D004725 ORTHO05D005683 5.1e-22 109.4 87 65.5
AL8G22680 Arabidopsis lyrata HOM05D004725 ORTHO05D005683 6.6e-22 109.0 176 41.5
FAN07G0549 Fragaria x ananassa HOM05D004725 ORTHO05D005683 8.6e-22 108.6 87 64.4
COL.COLO4_09634 Corchorus olitorius HOM05D004725 ORTHO05D005683 1.1e-21 108.2 169 43.2
BcaC06g30733 Brassica carinata HOM05D004725 ORTHO05D005683 1.9e-21 107.5 172 41.9
A06p38630 Brassica napus HOM05D004725 ORTHO05D005683 1.9e-21 107.5 172 41.9
C07p39630 Brassica napus HOM05D004725 ORTHO05D005683 1.9e-21 107.5 172 41.9
BolC7t44486H Brassica oleracea HOM05D004725 ORTHO05D005683 1.9e-21 107.5 172 41.9
BraA06t26778Z Brassica rapa HOM05D004725 ORTHO05D005683 1.9e-21 107.5 172 41.9
ATR0691G022 Amborella trichopoda HOM05D004725 ORTHO05D005683 2.5e-21 107.1 152 46.7
PSO063G5877 Papaver somniferum HOM05D004725 ORTHO05D005683 4.3e-21 106.3 114 51.8
PSO384G4206 Papaver somniferum HOM05D004725 ORTHO05D005683 4.3e-21 106.3 172 41.3
HPP92_027744 Vanilla planifolia HOM05D004725 ORTHO05D005683 4.3e-21 106.3 87 62.1
AT5G49010 Arabidopsis thaliana HOM05D004725 ORTHO05D005683 5.6e-21 105.9 176 40.9
Duzib212G0103 Durio zibethinus HOM05D004725 ORTHO05D005683 7.3e-21 105.5 180 41.1
MELO3C006096.2 Cucumis melo HOM05D004725 ORTHO05D005683 9.5e-21 105.1 184 39.1
Thhalv10004892m.g Eutrema salsugineum HOM05D004725 ORTHO05D005683 1.2e-20 104.8 165 42.4
Zm00001eb108600 Zea mays HOM05D004725 ORTHO05D005683 1.2e-20 104.8 87 59.8
Sp2g19380 Schrenkiella parvula HOM05D004725 ORTHO05D005683 2.1e-20 104.0 165 41.8
Aa31LG11G8130 Aethionema arabicum HOM05D004725 ORTHO05D005683 3.6e-20 103.2 165 41.8
ClCG05G001400 Citrullus lanatus HOM05D004725 ORTHO05D005683 3.6e-20 103.2 182 40.1
Lalb_Chr20g0115601 Lupinus albus HOM05D004725 ORTHO05D005683 3.6e-20 103.2 68 72.1
CsaV3_3G008790 Cucumis sativus L. HOM05D004725 ORTHO05D005683 1.4e-19 101.3 182 38.5
SEGI_00745 Sequoiadendron giganteum HOM05D004725 ORTHO05D005683 1.8e-19 100.9 186 37.6
MD13G1151200 Malus domestica HOM05D004725 ORTHO05D005683 2.3e-19 100.5 116 51.7
CARHR056790 Cardamine hirsuta HOM05D004725 ORTHO05D005683 5.2e-19 99.4 79 63.3
AL8G22360 Arabidopsis lyrata HOM05D004725 ORTHO05D005683 6.8e-19 99.0 193 38.3
Ah.13g071340 Amaranthus hybridus HOM05D004725 ORTHO05D005683 2.6e-18 97.1 156 42.3
Sed0009995 Sechium edule HOM05D004725 ORTHO05D005683 3.4e-18 96.7 87 55.2
FAN12G0808 Fragaria x ananassa HOM05D004725 ORTHO05D005683 4.4e-18 96.3 181 40.9
Cpa.g.sc9.42 Carica papaya HOM05D004725 ORTHO05D005683 5.8e-18 95.9 144 45.8
SHI00123 Sapria himalayana HOM05D004725 ORTHO05D005683 5.8e-18 95.9 177 39.0
CSS0006752 Camellia sinensis var. sinensis HOM05D001691 ORTHO05D111688 1.3e-17 94.7 129 45.0
PGR031G0191 Punica granatum HOM05D004725 ORTHO05D005683 1.3e-17 94.7 167 39.5
CARHR182700 Cardamine hirsuta HOM05D004725 ORTHO05D005683 4.9e-17 92.8 78 57.7
MD16G1152100 Malus domestica HOM05D004725 ORTHO05D005683 5.4e-16 89.4 128 46.9
SMO351G0117 Selaginella moellendorffii HOM05D004725 ORTHO05D005683 2.7e-15 87.0 87 50.6
SalBow6G0528 Salvia bowleyana HOM05D004725 ORTHO05D005683 1.0e-14 85.1 178 38.8
Pp3c12_20580 Physcomitrium patens HOM05D004725 ORTHO05D005683 1.6e-12 77.8 72 47.2
Mapoly0029s0136 Marchantia polymorpha HOM05D004725 ORTHO05D005683 2.1e-12 77.4 79 49.4
TWI73G0983 Tripterygium wilfordii HOM05D004725 ORTHO05D005683 2.8e-12 77.0 64 67.2
FvH4_4g20000 Fragaria vesca HOM05D004725 ORTHO05D005683 6.2e-12 75.9 58 70.7
Hma1.2p1_0013F.1_g008380 Hydrangea macrophylla HOM05D004725 ORTHO05D005683 1.4e-11 74.7 54 64.8
RcHm_v2.0_Chr6g0255221 Rosa chinensis HOM05D004725 ORTHO05D005683 1.8e-11 74.3 64 59.4
EL10Ac3g05524 Beta vulgaris HOM05D004725 ORTHO05D005683 6.9e-11 72.4 163 35.6
RcHm_v2.0_Chr7g0210081 Rosa chinensis HOM05D004725 ORTHO05D005683 2.6e-10 70.5 73 53.4
AagrBONN_evm.TU.Sc2ySwM_228.2917 Anthoceros agrestis HOM05D004725 ORTHO05D005683 3.8e-09 66.6 77 45.5
CSS0020516 Camellia sinensis var. sinensis HOM05D015653 ORTHO05D113092 7.1e-08 62.4 199 32.2
MCO14G052 Micromonas commoda HOM05D004725 ORTHO05D005683 1.0e-06 58.5 74 44.6
AUR62039263 Chenopodium quinoa HOM05D004725 ORTHO05D005683 3.0e-06 57.0 124 33.1
HPP92_026067 Vanilla planifolia HOM05D004725 ORTHO05D005683 3.9e-06 56.6 42 69.0
CAN.G327.11 Capsicum annuum HOM05D004725 ORTHO05D005683 6.6e-06 55.8 46 50.0
CBR_g34308 Chara braunii HOM05D004725 ORTHO05D005683 6.6e-06 55.8 86 33.7


User provided reference genes

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