Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006015 Camellia sinensis var. sinensis HOM05D005378 ORTHO05D006986 2.8e-79 298.5 146 100.0
COL.COLO4_23814 Corchorus olitorius HOM05D005378 ORTHO05D006986 1.9e-40 169.5 90 88.9
Actinidia02066 Actinidia chinensis HOM05D005378 ORTHO05D006986 3.7e-39 165.2 90 84.4
Lj2A203G52 Lonicera japonica HOM05D005378 ORTHO05D006986 2.4e-38 162.5 97 81.4
Rhsim10G0118700 Rhododendron simsii HOM05D005378 ORTHO05D006986 3.1e-38 162.2 88 87.5
Hma1.2p1_2135F.1_g314860 Hydrangea macrophylla HOM05D005378 ORTHO05D006986 4.1e-38 161.8 88 87.5
Duzib205G1930 Durio zibethinus HOM05D005378 ORTHO05D006986 9.0e-38 160.6 97 78.4
Gohir.A08G176000 Gossypium hirsutum HOM05D005378 ORTHO05D006986 9.0e-38 160.6 101 77.2
QL12p016275 Quercus lobata HOM05D005378 ORTHO05D006986 9.0e-38 160.6 88 83.0
Cfa012056 Carpinus fangiana HOM05D005378 ORTHO05D006986 1.2e-37 160.2 88 83.0
Glyma.05G055000 Glycine max HOM05D005378 ORTHO05D006986 2.0e-37 159.5 87 86.2
Oeu001911.1 Olea europaea HOM05D005378 ORTHO05D006986 2.0e-37 159.5 88 85.2
Oeu001912.1 Olea europaea HOM05D005378 ORTHO05D006986 2.0e-37 159.5 88 85.2
Gohir.D08G194800 Gossypium hirsutum HOM05D005378 ORTHO05D006986 2.6e-37 159.1 101 76.2
Gorai.004G205500 Gossypium raimondii HOM05D005378 ORTHO05D006986 2.6e-37 159.1 101 76.2
A09p63820 Brassica napus HOM05D005378 ORTHO05D006986 1.0e-36 157.1 113 70.8
BraA09t41728Z Brassica rapa HOM05D005378 ORTHO05D006986 1.0e-36 157.1 113 70.8
ClCG00G006560 Citrullus lanatus HOM05D005378 ORTHO05D006986 1.3e-36 156.8 87 82.8
CiPaw.11G143700 Carya illinoinensis HOM05D005378 ORTHO05D006986 1.7e-36 156.4 87 79.3
Lj4g0009345 Lotus japonicus HOM05D005378 ORTHO05D006986 1.7e-36 156.4 88 81.8
Prupe.5G084900 Prunus persica HOM05D005378 ORTHO05D006986 1.7e-36 156.4 101 77.2
MSTRG.25561 Avicennia marina HOM05D005378 ORTHO05D006986 2.2e-36 156.0 87 83.9
ClCG00G000130 Citrullus lanatus HOM05D005378 ORTHO05D006986 2.2e-36 156.0 88 80.7
ClCG10G003380 Citrullus lanatus HOM05D005378 ORTHO05D006986 2.2e-36 156.0 88 80.7
MELO3C014007.2 Cucumis melo HOM05D005378 ORTHO05D006986 2.2e-36 156.0 92 79.3
Eucgr.E00505 Eucalyptus grandis HOM05D005378 ORTHO05D006986 2.2e-36 156.0 91 81.3
Lalb_Chr05g0225201 Lupinus albus HOM05D005378 ORTHO05D006986 2.9e-36 155.6 88 80.7
Thecc.03G266200 Theobroma cacao HOM05D005378 ORTHO05D006986 3.8e-36 155.2 101 76.2
Phvul.003G217000 Phaseolus vulgaris HOM05D005378 ORTHO05D006986 5.0e-36 154.8 88 81.8
RcHm_v2.0_Chr7g0200231 Rosa chinensis HOM05D005378 ORTHO05D006986 5.0e-36 154.8 101 74.3
MSTRG.12037 Avicennia marina HOM05D005378 ORTHO05D006986 6.5e-36 154.5 88 80.7
Haze_09001 Corylus avellana HOM05D005378 ORTHO05D006986 6.5e-36 154.5 88 79.5
CsaV3_3G003410 Cucumis sativus L. HOM05D005378 ORTHO05D006986 6.5e-36 154.5 88 79.5
Ca_12295_v3 Cicer arietinum L. HOM05D005378 ORTHO05D006986 1.1e-35 153.7 87 82.8
arahy.Tifrunner.gnm1.ann1.1K1ZSN Arachis hypogaea HOM05D005378 ORTHO05D006986 1.4e-35 153.3 88 79.5
arahy.Tifrunner.gnm1.ann1.2GQ0W5 Arachis hypogaea HOM05D005378 ORTHO05D006986 1.4e-35 153.3 88 79.5
Solyc08g079830.4 Solanum lycopersicum HOM05D005378 ORTHO05D006986 1.4e-35 153.3 80 92.5
TPR.G37594 Trifolium pratense HOM05D005378 ORTHO05D006986 1.4e-35 153.3 87 81.6
BcaB08g34272 Brassica carinata HOM05D005378 ORTHO05D006986 1.9e-35 152.9 113 69.0
DCAR_006775 Daucus carota HOM05D005378 ORTHO05D006986 2.5e-35 152.5 88 81.8
Potri.003G118400 Populus trichocarpa HOM05D005378 ORTHO05D006986 3.2e-35 152.1 88 79.5
Sabra03G0082400 Salix brachista HOM05D005378 ORTHO05D006986 3.2e-35 152.1 97 74.2
TWI60G1116 Tripterygium wilfordii HOM05D005378 ORTHO05D006986 3.2e-35 152.1 97 74.2
Sopen08g028190 Solanum pennellii HOM05D005378 ORTHO05D006986 4.2e-35 151.8 80 91.2
VMungo0251G1120 Vigna mungo HOM05D005378 ORTHO05D006986 4.2e-35 151.8 88 79.5
Ciclev10021134m.g Citrus clementina HOM05D005378 ORTHO05D006986 5.5e-35 151.4 97 73.2
BcaB03g13183 Brassica carinata HOM05D005378 ORTHO05D006986 7.2e-35 151.0 111 69.4
BcaC07g41696 Brassica carinata HOM05D005378 ORTHO05D006986 7.2e-35 151.0 113 69.0
C08p15470 Brassica napus HOM05D005378 ORTHO05D006986 7.2e-35 151.0 111 69.4
C08p47320 Brassica napus HOM05D005378 ORTHO05D006986 7.2e-35 151.0 113 69.0
BolC8t49175H Brassica oleracea HOM05D005378 ORTHO05D006986 7.2e-35 151.0 111 69.4
BolC8t52274H Brassica oleracea HOM05D005378 ORTHO05D006986 7.2e-35 151.0 113 69.0
BraA08t35202Z Brassica rapa HOM05D005378 ORTHO05D006986 7.2e-35 151.0 111 69.4
FAN08G1559 Fragaria x ananassa HOM05D005378 ORTHO05D006986 7.2e-35 151.0 112 67.9
PGR042G0099 Punica granatum HOM05D005378 ORTHO05D006986 7.2e-35 151.0 88 79.5
SalBow6G7208 Salvia bowleyana HOM05D005378 ORTHO05D006986 7.2e-35 151.0 87 79.3
Sp1g11100 Schrenkiella parvula HOM05D005378 ORTHO05D006986 7.2e-35 151.0 113 68.1
CAN.G630.23 Capsicum annuum HOM05D005378 ORTHO05D006986 9.4e-35 150.6 80 90.0
Psat4g069440 Pisum sativum HOM05D005378 ORTHO05D006986 9.4e-35 150.6 87 82.8
Atru.chr9.1492 Acer truncatum HOM05D005378 ORTHO05D006986 1.2e-34 150.2 88 78.4
Carub.0001s1221 Capsella rubella HOM05D005378 ORTHO05D006986 1.2e-34 150.2 113 69.0
Migut.A00880 Erythranthe guttata HOM05D005378 ORTHO05D006986 1.2e-34 150.2 88 78.4
Potri.001G113800 Populus trichocarpa HOM05D005378 ORTHO05D006986 1.2e-34 150.2 91 76.9
FAN13G1015 Fragaria x ananassa HOM05D005378 ORTHO05D006986 1.6e-34 149.8 101 72.3
AUR62010552 Chenopodium quinoa HOM05D005378 ORTHO05D006986 2.1e-34 149.4 88 83.0
Manes.02G028800 Manihot esculenta HOM05D005378 ORTHO05D006986 2.1e-34 149.4 89 80.9
Nitab4.5_0005167g0010 Nicotiana tabacum HOM05D005378 ORTHO05D006986 2.1e-34 149.4 80 88.8
Peaxi162Scf00620g00241 Petunia axillaris HOM05D005378 ORTHO05D006986 2.7e-34 149.1 80 87.5
SGA_v2.0_scaffold37G14872 Striga asiatica HOM05D005378 ORTHO05D006986 2.7e-34 149.1 88 79.5
CARHR012800 Cardamine hirsuta HOM05D005378 ORTHO05D006986 3.6e-34 148.7 113 68.1
Hund14698 Selenicereus undatus HOM05D005378 ORTHO05D006986 3.6e-34 148.7 88 80.7
A08p32790 Brassica napus HOM05D005378 ORTHO05D006986 4.6e-34 148.3 111 68.5
Medtr4g101820 Medicago truncatula HOM05D005378 ORTHO05D006986 4.6e-34 148.3 87 77.0
Sed0008997 Sechium edule HOM05D005378 ORTHO05D006986 4.6e-34 148.3 88 77.3
Nitab4.5_0012494g0030 Nicotiana tabacum HOM05D005378 ORTHO05D006986 6.1e-34 147.9 80 88.8
Cpa.g.sc29.47 Carica papaya HOM05D005378 ORTHO05D006986 7.9e-34 147.5 88 79.5
AUR62017340 Chenopodium quinoa HOM05D005378 ORTHO05D006986 7.9e-34 147.5 88 81.8
AL1G23870 Arabidopsis lyrata HOM05D005378 ORTHO05D006986 1.0e-33 147.1 113 66.4
FvH4_5g01090 Fragaria vesca HOM05D005378 ORTHO05D006986 1.8e-33 146.4 88 77.3
TAR629G1125 Trochodendron aralioides HOM05D005378 ORTHO05D006986 1.8e-33 146.4 91 73.6
Aa31LG2G450 Aethionema arabicum HOM05D005378 ORTHO05D006986 2.3e-33 146.0 97 70.1
FAN18G4319 Fragaria x ananassa HOM05D005378 ORTHO05D006986 2.3e-33 146.0 87 78.2
Nn6g34347 Nelumbo nucifera HOM05D005378 ORTHO05D006986 2.3e-33 146.0 88 75.0
Oeu001910.1 Olea europaea HOM05D005378 ORTHO05D006986 2.3e-33 146.0 88 78.4
Sabra01G0087000 Salix brachista HOM05D005378 ORTHO05D006986 3.0e-33 145.6 97 70.1
GSVIVG01019902001 Vitis vinifera HOM05D005378 ORTHO05D006986 3.0e-33 145.6 88 75.0
AT1G12520 Arabidopsis thaliana HOM05D005378 ORTHO05D006986 3.9e-33 145.2 98 72.4
CANSAT21G0731 Cannabis sativa HOM05D005378 ORTHO05D006986 3.9e-33 145.2 88 76.1
EL10Ac5g12674 Beta vulgaris HOM05D005378 ORTHO05D006986 5.1e-33 144.8 86 81.4
ECA233G4179 Erigeron canadensis HOM05D005378 ORTHO05D006986 5.1e-33 144.8 86 77.9
THA.LOC104818281 Tarenaya hassleriana HOM05D005378 ORTHO05D006986 6.7e-33 144.4 86 77.9
Thhalv10008232m.g Eutrema salsugineum HOM05D005378 ORTHO05D006986 8.8e-33 144.1 113 66.4
Aqoxy7G00527 Aquilegia oxysepala HOM05D005378 ORTHO05D006986 1.1e-32 143.7 88 75.0
PGSC0003DMG400003914 Solanum tuberosum HOM05D005378 ORTHO05D006986 1.1e-32 143.7 80 85.0
Sc01g0008970 Simmondsia chinensis HOM05D005378 ORTHO05D006986 1.9e-32 142.9 88 73.9
MD00G1069800 Malus domestica HOM05D005378 ORTHO05D006986 3.3e-32 142.1 88 75.0
Ah.12g057930 Amaranthus hybridus HOM05D005378 ORTHO05D006986 5.7e-32 141.4 88 78.4
MD04G1072900 Malus domestica HOM05D005378 ORTHO05D006986 5.7e-32 141.4 88 75.0
Lsat_1_v5_gn_6_10640 Lactuca sativa HOM05D005378 ORTHO05D006986 1.3e-31 140.2 91 71.4
CDE01G0558 Ceratophyllum demersum HOM05D005378 ORTHO05D006986 2.8e-31 139.0 87 73.6
PSO478G1428 Papaver somniferum HOM05D005378 ORTHO05D006986 3.7e-31 138.7 88 76.1
Cc08_g13620 Coffea canephora HOM05D005378 ORTHO05D006986 4.8e-31 138.3 78 83.3
HanXRQChr02g0047721 Helianthus annuus HOM05D005378 ORTHO05D006986 6.3e-31 137.9 86 72.1
PGR031G2614 Punica granatum HOM05D005378 ORTHO05D006986 4.1e-30 135.2 89 69.7
PSO782G2812 Papaver somniferum HOM05D005378 ORTHO05D006986 1.5e-29 133.3 88 73.9
Zm00001eb073490 Zea mays HOM05D005378 ORTHO05D006986 7.7e-29 131.0 83 73.5
Os04g0573200 Oryza sativa ssp. japonica HOM05D005378 ORTHO05D006986 1.7e-28 129.8 79 75.9
ATR0757G076 Amborella trichopoda HOM05D005378 ORTHO05D006986 2.9e-28 129.0 88 67.0
HPP92_021079 Vanilla planifolia HOM05D005378 ORTHO05D006986 7.9e-26 120.9 78 70.5
Pp3c21_8100 Physcomitrium patens HOM05D005378 ORTHO05D006986 2.3e-25 119.4 83 66.3
Pp3c18_10490 Physcomitrium patens HOM05D005378 ORTHO05D006986 1.1e-24 117.1 81 67.9
AagrBONN_evm.TU.Sc2ySwM_228.1340 Anthoceros agrestis HOM05D005378 ORTHO05D006986 2.0e-24 116.3 91 59.3
BcaC04g22737 Brassica carinata HOM05D005378 ORTHO05D006986 1.3e-23 113.6 82 63.4
C09p15780 Brassica napus HOM05D005378 ORTHO05D006986 1.3e-23 113.6 82 63.4
BolC9t54490H Brassica oleracea HOM05D005378 ORTHO05D006986 1.3e-23 113.6 82 63.4
A09p13280 Brassica napus HOM05D005378 ORTHO05D006986 2.2e-23 112.8 82 63.4
BraA09t36976Z Brassica rapa HOM05D005378 ORTHO05D006986 4.8e-23 111.7 82 63.4
BcaC06g31923 Brassica carinata HOM05D005378 ORTHO05D006986 6.3e-23 111.3 82 65.9
Mapoly0127s0018 Marchantia polymorpha HOM05D005378 ORTHO05D006986 6.3e-23 111.3 108 50.9
SMO201G0146 Selaginella moellendorffii HOM05D005378 ORTHO05D006986 3.1e-22 109.0 78 65.4
CBR_g27778 Chara braunii HOM05D005378 ORTHO05D006986 3.8e-20 102.1 81 61.7
Migut.D00824 Erythranthe guttata HOM05D005378 ORTHO05D006986 1.1e-16 90.5 88 59.1
Actinidia14494 Actinidia chinensis HOM05D005378 ORTHO05D006986 7.4e-16 87.8 64 62.5
AagrBONN_evm.TU.Sc2ySwM_228.914 Anthoceros agrestis HOM05D005378 ORTHO05D006986 1.4e-14 83.6 77 54.5
MCO04G010 Micromonas commoda HOM05D005378 ORTHO05D006986 2.5e-11 72.8 85 44.7
Mapoly0152s0017 Marchantia polymorpha HOM05D005378 ORTHO05D006986 4.0e-09 65.5 85 43.5
Cfa026490 Carpinus fangiana HOM05D005378 ORTHO05D125958 3.3e-08 62.4 77 44.2
Pp3c17_14500 Physcomitrium patens HOM05D005378 ORTHO05D001264 3.1e-06 55.8 74 40.5


User provided reference genes

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