Gene: PGR042G0099
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR042G0099
- Transcript Identifier PGR042G0099.01
- Gene Type Coding gene
- Location NC_045130.1 : 9371836-9374664 : positive
Gene Family Information
- ID HOM05D005378
- #Genes/#Species 141/95
- Phylogenetic origin
- ID ORTHO05D006986
- #Genes/#Species 135/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pid XP_031392000.1
- name LOC116204076
- name XM_031536140.1
- id gene-LOC116204076
- uniprot A0A218XT91
Descriptions
- product copper chaperone for superoxide dismutase, chloroplastic/cytosolic-like, transcript variant X2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006801 | IEA | GOA Database | superoxide metabolic process | |
| GO:0006801 | IEA | InterPro | superoxide metabolic process | |
| GO:0006878 | ISO | PLAZA Integrative Orthology | cellular copper ion homeostasis | AT1G12520 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0016532 | ISO | PLAZA Integrative Orthology | superoxide dismutase copper chaperone activity | AT1G12520 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G12520 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G12520 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006121 | Heavy metal-associated domain, HMA |
| IPR001424 | Superoxide dismutase, copper/zinc binding domain |
| IPR024134 | Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone |
| IPR036163 | Heavy metal-associated domain superfamily |
| IPR036423 | Superoxide dismutase-like, copper/zinc binding domain superfamily |
| Mapman id | Description |
|---|---|
| 10.2.1.4 | Redox homeostasis.enzymatic reactive oxygen scavenging.superoxide dismutase activities.copper chaperone (CCS) |