Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 1.6e-46 190.3 222 100.0
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 7.1e-26 121.7 65 92.3
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 9.2e-26 121.3 69 88.4
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 1.6e-25 120.6 65 87.7
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 2.7e-25 119.8 63 93.7
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 3.5e-25 119.4 71 87.3
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 4.6e-25 119.0 67 86.6
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 6.0e-25 118.6 65 90.8
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 6.0e-25 118.6 104 63.5
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 1.3e-24 117.5 63 90.5
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 1.3e-24 117.5 63 88.9
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 1.3e-24 117.5 63 88.9
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 1.3e-24 117.5 63 88.9
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 1.3e-24 117.5 63 88.9
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 1.3e-24 117.5 63 88.9
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 1.3e-24 117.5 64 89.1
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 1.3e-24 117.5 62 90.3
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.3e-24 117.5 62 93.5
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 1.7e-24 117.1 63 87.3
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 1.7e-24 117.1 63 87.3
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 1.7e-24 117.1 63 87.3
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 1.7e-24 117.1 63 90.5
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.7e-24 117.1 65 89.2
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 1.7e-24 117.1 67 85.1
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 1.7e-24 117.1 69 84.1
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 1.7e-24 117.1 62 91.9
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 1.7e-24 117.1 63 88.9
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 1.7e-24 117.1 62 91.9
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 1.7e-24 117.1 62 93.5
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 1.7e-24 117.1 64 89.1
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 1.7e-24 117.1 68 82.4
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 2.3e-24 116.7 60 93.3
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 2.3e-24 116.7 63 90.5
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 2.3e-24 116.7 64 87.5
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 2.3e-24 116.7 67 86.6
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 3.9e-24 115.9 71 83.1
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 5.1e-24 115.5 63 88.9
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 5.1e-24 115.5 62 88.7
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 5.1e-24 115.5 62 88.7
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 5.1e-24 115.5 62 91.9
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 6.6e-24 115.2 63 87.3
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 6.6e-24 115.2 69 84.1
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 6.6e-24 115.2 69 82.6
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 6.6e-24 115.2 69 82.6
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 8.6e-24 114.8 60 93.3
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 1.1e-23 114.4 63 87.3
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 1.1e-23 114.4 67 80.6
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 1.5e-23 114.0 110 60.0
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.5e-23 114.0 62 87.1
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.5e-23 114.0 62 87.1
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 1.5e-23 114.0 62 87.1
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 1.9e-23 113.6 62 90.3
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 1.9e-23 113.6 63 87.3
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 3.3e-23 112.8 106 67.9
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 3.3e-23 112.8 63 88.9
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 3.3e-23 112.8 63 87.3
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 3.3e-23 112.8 64 84.4
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 4.3e-23 112.5 64 84.4
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 4.3e-23 112.5 64 84.4
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 5.6e-23 112.1 60 91.7
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 5.6e-23 112.1 63 85.7
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 5.6e-23 112.1 63 87.3
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 7.3e-23 111.7 64 82.8
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 9.6e-23 111.3 63 84.1
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 9.6e-23 111.3 56 96.4
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 9.6e-23 111.3 105 77.1
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 1.2e-22 110.9 69 79.7
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 1.2e-22 110.9 63 87.3
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 2.1e-22 110.2 58 93.1
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 4.7e-22 109.0 64 82.8
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 4.7e-22 109.0 63 82.5
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 6.2e-22 108.6 70 80.0
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 8.1e-22 108.2 63 84.1
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 8.1e-22 108.2 56 92.9
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 1.1e-21 107.8 65 84.6
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.8e-21 107.1 59 86.4
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 2.4e-21 106.7 62 80.6
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 2.4e-21 106.7 130 61.5
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 3.1e-21 106.3 59 89.8
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 4.0e-21 105.9 63 81.0
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 9.9e-20 101.3 55 89.1
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 1.3e-19 100.9 63 82.5
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 2.2e-19 100.1 59 81.4
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 3.8e-19 99.4 60 83.3
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 1.1e-18 97.8 51 94.1
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 4.2e-18 95.9 52 88.5
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 1.2e-17 94.4 63 73.0
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 3.5e-17 92.8 65 72.3
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.3e-16 90.9 51 88.2
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 5.1e-16 89.0 63 71.4
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 8.7e-16 88.2 60 71.7
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.1e-15 87.8 46 91.3
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 1.1e-15 87.8 61 70.5
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 2.5e-15 86.7 52 80.8
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 7.1e-10 68.6 64 51.6


User provided reference genes

Program Settings