Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 6.1e-76 287.3 140 100.0
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 8.1e-44 180.6 141 66.0
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 2.6e-42 175.6 142 64.1
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 1.3e-41 173.3 144 65.3
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 1.7e-41 172.9 126 68.3
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 1.4e-40 169.9 143 63.6
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 4.2e-40 168.3 147 65.3
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 2.7e-39 165.6 141 61.7
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 2.7e-39 165.6 143 58.0
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 3.5e-39 165.2 141 64.5
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 6.0e-39 164.5 139 62.6
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 7.8e-39 164.1 141 61.0
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 1.7e-38 162.9 141 62.4
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 1.7e-38 162.9 139 62.6
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 8.7e-38 160.6 140 59.3
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 2.5e-37 159.1 161 55.3
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 4.3e-37 158.3 140 61.4
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 5.6e-37 157.9 137 58.4
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 9.6e-37 157.1 140 59.3
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 9.6e-37 157.1 139 59.7
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 1.3e-36 156.8 143 58.7
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 2.1e-36 156.0 139 60.4
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 6.2e-36 154.5 135 60.7
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 6.2e-36 154.5 143 58.0
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 6.2e-36 154.5 165 52.7
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 1.4e-35 153.3 141 59.6
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 1.8e-35 152.9 135 57.0
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 2.4e-35 152.5 141 58.2
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 2.4e-35 152.5 145 59.3
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 3.1e-35 152.1 143 56.6
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 4.0e-35 151.8 143 60.1
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 4.0e-35 151.8 143 60.1
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 5.3e-35 151.4 140 60.0
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 5.3e-35 151.4 142 58.5
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 6.9e-35 151.0 141 57.4
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 6.9e-35 151.0 143 55.9
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 6.9e-35 151.0 141 59.6
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 9.0e-35 150.6 143 56.6
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 1.2e-34 150.2 140 57.9
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 1.5e-34 149.8 148 56.8
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 2.6e-34 149.1 140 55.7
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 2.6e-34 149.1 135 54.8
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 3.4e-34 148.7 138 57.2
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 3.4e-34 148.7 141 58.2
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 3.4e-34 148.7 143 55.9
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 4.5e-34 148.3 136 61.0
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 5.8e-34 147.9 142 56.3
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 7.6e-34 147.5 138 55.8
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 7.6e-34 147.5 141 56.7
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 1.3e-33 146.7 136 58.1
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 2.9e-33 145.6 141 55.3
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 3.8e-33 145.2 144 55.6
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 4.9e-33 144.8 98 70.4
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 4.9e-33 144.8 140 56.4
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 4.9e-33 144.8 144 57.6
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 6.4e-33 144.4 98 71.4
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 6.4e-33 144.4 140 55.0
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 1.9e-32 142.9 140 55.0
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 7.1e-32 141.0 143 53.1
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 7.1e-32 141.0 136 55.9
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 1.6e-31 139.8 141 56.7
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 2.1e-31 139.4 144 55.6
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 2.7e-31 139.0 89 73.0
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 2.7e-31 139.0 146 54.8
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 2.7e-31 139.0 135 54.1
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 3.5e-31 138.7 138 55.1
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 4.6e-31 138.3 139 54.0
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 7.9e-31 137.5 152 51.3
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 7.9e-31 137.5 89 71.9
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 6.7e-30 134.4 139 53.2
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 1.1e-29 133.7 147 53.1
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 1.9e-29 132.9 124 52.4
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 4.3e-29 131.7 79 75.9
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 2.1e-28 129.4 95 65.3
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 4.8e-28 128.3 78 70.5
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 6.2e-28 127.9 147 49.0
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 1.1e-27 127.1 122 54.9
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 1.8e-27 126.3 98 64.3
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 2.4e-27 125.9 134 53.7
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 3.1e-27 125.6 136 54.4
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 3.1e-27 125.6 136 54.4
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 3.1e-27 125.6 133 54.1
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 4.0e-27 125.2 136 54.4
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 4.0e-27 125.2 136 54.4
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 2.0e-26 122.9 134 51.5
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 2.0e-26 122.9 142 49.3
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 5.8e-26 121.3 134 50.0
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 5.8e-26 121.3 134 50.0
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 5.8e-26 121.3 142 49.3
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 1.7e-25 119.8 142 48.6
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 2.2e-25 119.4 142 48.6
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 3.8e-25 118.6 141 49.6
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 3.8e-25 118.6 140 51.4
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 8.4e-25 117.5 138 52.9
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 1.9e-24 116.3 142 47.2
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 4.2e-24 115.2 139 47.5
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 9.3e-24 114.0 84 61.9
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 1.6e-23 113.2 143 49.7
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 2.7e-23 112.5 92 60.9
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 2.7e-23 112.5 140 47.9
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 6.0e-23 111.3 140 47.1
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 1.0e-22 110.5 87 64.4
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 1.0e-22 110.5 137 49.6
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 1.3e-22 110.2 81 64.2
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 1.8e-22 109.8 145 47.6
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 2.3e-22 109.4 77 62.3
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 3.0e-22 109.0 68 70.6
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 8.7e-22 107.5 118 52.5
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 9.6e-21 104.0 135 43.7
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 1.6e-20 103.2 85 57.6
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 2.1e-20 102.8 121 54.5
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 2.8e-20 102.4 118 50.8
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 2.8e-20 102.4 98 51.0
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 3.1e-19 99.0 86 57.0
Atru.chr9.488 Acer truncatum HOM05D006427 ORTHO05D008147 2.0e-18 96.3 82 56.1
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 3.4e-18 95.5 105 45.7
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 2.9e-17 92.4 84 57.1
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 1.1e-16 90.5 113 43.4
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 3.5e-15 85.5 71 62.0
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 1.0e-14 84.0 88 46.6
Potri.014G145500 Populus trichocarpa HOM05D006427 ORTHO05D008147 6.7e-14 81.3 123 43.1
ClCG05G012680 Citrullus lanatus HOM05D006427 ORTHO05D008147 1.5e-13 80.1 117 43.6
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 2.5e-13 79.3 85 45.9
Sc03g0004990 Simmondsia chinensis HOM05D006427 ORTHO05D008147 8.2e-12 74.3 119 41.2
Atru.chr1.3017 Acer truncatum HOM05D006427 ORTHO05D008147 1.2e-10 70.5 91 51.6
Zm00001eb127000 Zea mays HOM05D006427 ORTHO05D008147 1.2e-07 60.5 65 46.2
EL10Ac6g13399 Beta vulgaris HOM05D006427 ORTHO05D008147 2.7e-07 59.3 73 45.2
Zm00001eb390880 Zea mays HOM05D001191 ORTHO05D000979 4.6e-07 58.5 84 41.7
BolC2t11399H Brassica oleracea HOM05D006427 ORTHO05D008147 7.9e-07 57.8 99 39.4
AagrBONN_evm.TU.Sc2ySwM_344.2063 Anthoceros agrestis HOM05D006427 ORTHO05D008147 1.0e-06 57.4 111 34.2


User provided reference genes

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