Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 3.0e-91 338.6 179 100.0
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 3.0e-91 338.6 179 100.0
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 4.2e-45 185.3 178 60.1
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 8.5e-38 161.0 178 55.1
Hma1.2p1_0389F.1_g142520 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 1.7e-30 136.7 178 49.4
QL02p018787 Quercus lobata HOM05D008192 ORTHO05D010301 8.5e-30 134.4 177 49.2
Hma1.2p1_1685F.1_g297470 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 1.9e-29 133.3 178 48.9
Actinidia22286 Actinidia chinensis HOM05D008192 ORTHO05D010301 5.5e-29 131.7 101 68.3
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 5.5e-29 131.7 123 61.0
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 2.7e-28 129.4 179 48.6
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 1.5e-26 123.6 181 48.6
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 4.4e-26 122.1 179 47.5
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 4.8e-25 118.6 177 46.9
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 1.4e-24 117.1 179 45.8
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 1.8e-24 116.7 174 47.1
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 4.1e-24 115.5 178 47.2
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 5.3e-24 115.2 178 46.6
Gohir.A05G060200 Gossypium hirsutum HOM05D008192 ORTHO05D010301 5.3e-24 115.2 180 45.6
Gorai.009G063500 Gossypium raimondii HOM05D008192 ORTHO05D010301 2.0e-23 113.2 180 45.6
FvH4_2g41181 Fragaria vesca HOM05D008192 ORTHO05D010301 1.0e-22 110.9 182 43.4
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 2.9e-22 109.4 199 39.7
Ciclev10009717m.g Citrus clementina HOM05D008192 ORTHO05D010301 6.5e-22 108.2 178 43.8
Cc04_g10610 Coffea canephora HOM05D008192 ORTHO05D010301 1.5e-21 107.1 183 43.7
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 2.5e-21 106.3 201 41.3
RcHm_v2.0_Chr6g0299341 Rosa chinensis HOM05D008192 ORTHO05D010301 5.5e-21 105.1 182 41.2
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 1.2e-20 104.0 168 46.4
FAN15G3555 Fragaria x ananassa HOM05D002088 ORTHO05D002204 2.1e-20 103.2 171 40.9
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 2.7e-20 102.8 168 45.2
FAN20G1545 Fragaria x ananassa HOM05D008192 ORTHO05D010301 4.7e-20 102.1 183 39.9
Sc09g0010700 Simmondsia chinensis HOM05D008192 ORTHO05D010301 3.0e-19 99.4 165 44.8
Oeu021912.1 Olea europaea HOM05D008192 ORTHO05D010301 6.8e-19 98.2 178 40.4
SalBow4G3126 Salvia bowleyana HOM05D008192 ORTHO05D010301 2.0e-18 96.7 178 38.8
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 5.7e-18 95.1 183 38.8
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 5.7e-18 95.1 169 41.4
Ah.10g025590 Amaranthus hybridus HOM05D008192 ORTHO05D010301 7.5e-18 94.7 170 38.8
AUR62032421 Chenopodium quinoa HOM05D008192 ORTHO05D010301 7.5e-18 94.7 169 40.8
MD08G1055700 Malus domestica HOM05D008192 ORTHO05D010301 7.5e-18 94.7 180 41.1
Atru.chr7.2557 Acer truncatum HOM05D008192 ORTHO05D010301 3.1e-16 89.4 176 38.6
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 3.1e-16 89.4 178 40.4
GSVIVG01035976001 Vitis vinifera HOM05D008192 ORTHO05D010301 3.1e-16 89.4 184 43.5
Duzib150G1248 Durio zibethinus HOM05D008192 ORTHO05D010301 4.1e-16 89.0 179 41.9
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 9.1e-16 87.8 101 54.5
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 3.5e-15 85.9 83 57.8
EL10Ac2g02493 Beta vulgaris HOM05D008192 ORTHO05D010301 4.5e-15 85.5 175 37.7
CANSAT25G1276 Cannabis sativa HOM05D008192 ORTHO05D010301 1.0e-14 84.3 167 42.5
Oeu032512.1 Olea europaea HOM05D008192 ORTHO05D010301 1.0e-14 84.3 102 49.0
Migut.A00360 Erythranthe guttata HOM05D008192 ORTHO05D010301 2.9e-14 82.8 179 38.0
Manes.03G008000 Manihot esculenta HOM05D008192 ORTHO05D010301 1.5e-13 80.5 88 52.3
Manes.16G130300 Manihot esculenta HOM05D008192 ORTHO05D010301 1.5e-13 80.5 92 53.3
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 2.5e-13 79.7 94 47.9
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 2.5e-13 79.7 94 47.9
FAN27G3331 Fragaria x ananassa HOM05D002088 ORTHO05D002204 2.5e-13 79.7 94 50.0
Sabra06G0207000 Salix brachista HOM05D008192 ORTHO05D010301 3.2e-13 79.3 177 37.9
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 5.5e-13 78.6 200 37.0
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 9.4e-13 77.8 121 43.8
Nitab4.5_0000264g0200 Nicotiana tabacum HOM05D008192 ORTHO05D010301 1.0e-11 74.3 101 43.6
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 2.3e-11 73.2 89 47.2
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 4.0e-11 72.4 109 45.0
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 5.2e-11 72.0 84 53.6
Nitab4.5_0010499g0010 Nicotiana tabacum HOM05D008192 ORTHO05D010301 5.2e-11 72.0 178 34.3
Potri.006G264900 Populus trichocarpa HOM05D008192 ORTHO05D010301 5.2e-11 72.0 76 52.6
Glyma.17G223700 Glycine max HOM05D008192 ORTHO05D010301 6.8e-11 71.6 173 34.7
Hund25618 Selenicereus undatus HOM05D008192 ORTHO05D010301 3.4e-10 69.3 178 32.0
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 4.4e-10 68.9 102 44.1
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 5.7e-10 68.6 105 42.9
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 9.8e-10 67.8 102 43.1
Solyc08g006760.4 Solanum lycopersicum HOM05D008192 ORTHO05D010301 9.8e-10 67.8 186 33.9
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 1.3e-09 67.4 130 40.0
Peaxi162Scf00045g02027 Petunia axillaris HOM05D008192 ORTHO05D010301 1.3e-09 67.4 74 52.7
Sed0007247 Sechium edule HOM05D008192 ORTHO05D010301 1.3e-09 67.4 78 50.0
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 1.3e-09 67.4 103 40.8
arahy.Tifrunner.gnm1.ann1.D8U9UB Arachis hypogaea HOM05D008192 ORTHO05D010301 2.2e-09 66.6 155 34.2
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 2.2e-09 66.6 130 34.6
CSS0036931 Camellia sinensis var. sinensis HOM05D003759 ORTHO05D004149 2.8e-09 66.2 90 45.6
DCAR_022864 Daucus carota HOM05D008192 ORTHO05D010301 2.8e-09 66.2 75 54.7
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 2.8e-09 66.2 103 42.7
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 3.7e-09 65.9 89 44.9
Peaxi162Scf01286g00122 Petunia axillaris HOM05D008192 ORTHO05D010301 4.9e-09 65.5 162 36.4
SGA_v2.0_scaffold147G36345 Striga asiatica HOM05D008192 ORTHO05D010301 6.3e-09 65.1 176 31.2
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 1.1e-08 64.3 105 42.9
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 1.1e-08 64.3 93 43.0
Sopen08g002700 Solanum pennellii HOM05D008192 ORTHO05D010301 1.4e-08 63.9 179 36.3
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 1.8e-08 63.5 93 40.9
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 2.4e-08 63.2 89 43.8
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 2.4e-08 63.2 119 38.7
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 3.1e-08 62.8 89 42.7
Hund02985 Selenicereus undatus HOM05D008192 ORTHO05D010301 3.1e-08 62.8 189 34.9
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 4.1e-08 62.4 84 46.4
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 7.0e-08 61.6 105 38.1
Lalb_Chr24g0401951 Lupinus albus HOM05D008192 ORTHO05D010301 7.0e-08 61.6 78 44.9
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 9.1e-08 61.2 159 31.4
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 9.1e-08 61.2 88 44.3
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.6e-07 60.5 184 29.3
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 1.6e-07 60.5 115 36.5
DCAR_014806 Daucus carota HOM05D003759 ORTHO05D004149 3.5e-07 59.3 105 40.0
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 3.5e-07 59.3 108 37.0
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 3.5e-07 59.3 105 36.2
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 5.9e-07 58.5 87 43.7
arahy.Tifrunner.gnm1.ann1.XVGB1U Arachis hypogaea HOM05D008192 ORTHO05D010301 7.7e-07 58.2 197 29.9
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 7.7e-07 58.2 119 37.0
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 7.7e-07 58.2 74 48.6
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 7.7e-07 58.2 83 44.6
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 7.7e-07 58.2 165 33.9
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 7.7e-07 58.2 98 35.7
PGSC0003DMG400026278 Solanum tuberosum HOM05D008192 ORTHO05D010301 1.3e-06 57.4 76 48.7
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 2.3e-06 56.6 63 50.8
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 2.9e-06 56.2 110 34.5
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 2.9e-06 56.2 74 43.2
MD02G1006500 Malus domestica HOM05D003759 ORTHO05D004149 2.9e-06 56.2 99 40.4
FAN28G1366 Fragaria x ananassa HOM05D003759 ORTHO05D004149 3.8e-06 55.8 95 38.9
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 3.8e-06 55.8 99 42.4
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 3.8e-06 55.8 83 43.4
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 3.8e-06 55.8 96 42.7
Aqoxy7G03381 Aquilegia oxysepala HOM05D003759 ORTHO05D004149 5.0e-06 55.5 201 29.4
CAN.G1198.1 Capsicum annuum HOM05D008192 ORTHO05D010301 5.0e-06 55.5 160 31.2
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 5.0e-06 55.5 91 41.8
Actinidia01426 Actinidia chinensis HOM05D003759 ORTHO05D004149 6.6e-06 55.1 60 50.0
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea HOM05D003759 ORTHO05D004149 6.6e-06 55.1 118 37.3
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea HOM05D003759 ORTHO05D004149 6.6e-06 55.1 118 37.3
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 8.6e-06 54.7 95 37.9


User provided reference genes

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