Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 1.1e-27 125.9 66 100.0
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 8.0e-18 93.2 65 81.5
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 8.0e-18 93.2 65 81.5
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 6.3e-15 83.6 65 75.4
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 1.2e-13 79.3 65 70.8
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 1.2e-13 79.3 65 70.8
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.0e-13 78.6 65 70.8
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 3.5e-13 77.8 65 67.7
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 3.5e-13 77.8 65 70.8
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 4.5e-13 77.4 65 67.7
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.0e-12 76.3 65 67.7
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 1.0e-12 76.3 65 67.7
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 5.0e-12 73.9 65 66.2
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 6.6e-12 73.6 65 64.6
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 2.5e-11 71.6 65 63.1
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 3.3e-11 71.2 65 66.2
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 4.3e-11 70.9 65 67.7
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 7.3e-11 70.1 62 64.5
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 2.8e-10 68.2 65 63.1
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 2.8e-10 68.2 50 76.0
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 3.6e-10 67.8 61 67.2
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 4.7e-10 67.4 63 63.5
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 4.7e-10 67.4 53 71.7
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 4.7e-10 67.4 58 65.5
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 4.7e-10 67.4 65 64.6
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 8.0e-10 66.6 65 60.0
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 8.0e-10 66.6 57 66.7
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 8.0e-10 66.6 62 61.3
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 1.0e-09 66.2 50 74.0
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 1.4e-09 65.9 64 59.4
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 1.4e-09 65.9 54 64.8
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 1.4e-09 65.9 65 58.5
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.4e-09 65.9 63 60.3
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 1.8e-09 65.5 61 62.3
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 1.8e-09 65.5 65 56.9
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 1.8e-09 65.5 65 56.9
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 1.8e-09 65.5 65 56.9
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 1.8e-09 65.5 50 72.0
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 1.8e-09 65.5 50 72.0
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.8e-09 65.5 65 63.1
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 2.3e-09 65.1 50 74.0
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 2.3e-09 65.1 65 56.9
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 2.3e-09 65.1 49 75.5
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 2.3e-09 65.1 49 75.5
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 2.3e-09 65.1 55 69.1
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 2.3e-09 65.1 61 63.9
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 2.3e-09 65.1 60 56.7
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 2.3e-09 65.1 60 56.7
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 2.3e-09 65.1 63 58.7
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 3.1e-09 64.7 67 58.2
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 3.1e-09 64.7 64 57.8
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 3.1e-09 64.7 49 73.5
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 3.1e-09 64.7 55 67.3
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 4.0e-09 64.3 58 63.8
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 4.0e-09 64.3 61 59.0
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 4.0e-09 64.3 54 64.8
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 4.0e-09 64.3 54 64.8
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 5.2e-09 63.9 57 63.2
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 5.2e-09 63.9 60 60.0
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 5.2e-09 63.9 60 60.0
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 5.2e-09 63.9 58 62.1
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 6.8e-09 63.5 55 65.5
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 6.8e-09 63.5 57 59.6
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 6.8e-09 63.5 60 60.0
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 6.8e-09 63.5 65 56.9
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 6.8e-09 63.5 60 60.0
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 6.8e-09 63.5 55 65.5
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 6.8e-09 63.5 55 65.5
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 6.8e-09 63.5 63 57.1
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 6.8e-09 63.5 64 57.8
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 6.8e-09 63.5 58 62.1
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 8.9e-09 63.2 50 72.0
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 8.9e-09 63.2 55 65.5
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 8.9e-09 63.2 50 70.0
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 1.2e-08 62.8 49 71.4
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 1.2e-08 62.8 49 71.4
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 1.2e-08 62.8 64 60.9
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 1.2e-08 62.8 50 70.0
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.2e-08 62.8 50 70.0
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 1.5e-08 62.4 50 68.0
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 2.0e-08 62.0 54 61.1
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 2.0e-08 62.0 49 71.4
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.0e-08 62.0 50 72.0
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 2.0e-08 62.0 50 68.0
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 2.0e-08 62.0 50 68.0
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 2.6e-08 61.6 60 60.0
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 2.6e-08 61.6 55 63.6
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 2.6e-08 61.6 64 56.2
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 2.6e-08 61.6 50 70.0
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 2.6e-08 61.6 50 68.0
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 3.4e-08 61.2 50 66.0
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 3.4e-08 61.2 55 63.6
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 3.4e-08 61.2 71 54.9
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 4.4e-08 60.8 57 61.4
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 4.4e-08 60.8 50 66.0
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 4.4e-08 60.8 61 62.3
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 4.4e-08 60.8 50 66.0
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 5.8e-08 60.5 63 54.0
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 5.8e-08 60.5 60 58.3
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 5.8e-08 60.5 58 63.8
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 5.8e-08 60.5 50 64.0
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 9.8e-08 59.7 58 62.1
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 9.8e-08 59.7 65 58.5
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 9.8e-08 59.7 50 66.0
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 9.8e-08 59.7 50 66.0
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 9.8e-08 59.7 71 53.5
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 1.7e-07 58.9 60 55.0
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 2.2e-07 58.5 50 70.0
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 2.9e-07 58.2 50 64.0
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 3.7e-07 57.8 54 59.3
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 6.4e-07 57.0 48 64.6
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 6.4e-07 57.0 52 63.5
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 8.3e-07 56.6 50 62.0
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 1.4e-06 55.8 50 62.0
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.9e-06 55.5 65 52.3
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 2.4e-06 55.1 50 60.0
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 2.4e-06 55.1 54 55.6
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 3.2e-06 54.7 48 62.5
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 4.1e-06 54.3 50 60.0


User provided reference genes

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