Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005222 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 0.0e+00 1862.0 945 100.0
CSS0012001 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 0.0e+00 1860.9 945 99.9
Dinv28790 Davidia involucrata HOM05D004953 ORTHO05D006193 0.0e+00 1521.5 943 81.4
Rhsim13G0055000 Rhododendron simsii HOM05D004953 ORTHO05D006193 0.0e+00 1515.4 937 82.0
vmacro02841 Vaccinium macrocarpon HOM05D004953 ORTHO05D006193 0.0e+00 1477.2 958 79.1
Lj2C1111T4 Lonicera japonica HOM05D004953 ORTHO05D006193 0.0e+00 1416.7 943 76.5
Oeu013420.1 Olea europaea HOM05D004953 ORTHO05D006193 0.0e+00 1308.5 952 70.0
Cc01_g15850 Coffea canephora HOM05D004953 ORTHO05D006193 0.0e+00 1308.1 950 70.4
RcHm_v2.0_Chr6g0282191 Rosa chinensis HOM05D004953 ORTHO05D006193 0.0e+00 1280.0 950 67.1
Migut.D00772 Erythranthe guttata HOM05D004953 ORTHO05D006193 0.0e+00 1277.7 946 70.0
MD05G1153500 Malus domestica HOM05D004953 ORTHO05D006193 0.0e+00 1277.3 940 69.1
HanXRQChr12g0363951 Helianthus annuus HOM05D004953 ORTHO05D006193 0.0e+00 1269.6 957 67.1
Lsat_1_v5_gn_8_98501 Lactuca sativa HOM05D004953 ORTHO05D006193 0.0e+00 1265.4 939 68.2
Duzib133G0915 Durio zibethinus HOM05D004953 ORTHO05D006193 0.0e+00 1260.7 954 67.2
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 0.0e+00 1256.1 943 66.6
Manes.13G056300 Manihot esculenta HOM05D004953 ORTHO05D006193 0.0e+00 1256.1 943 68.2
PGSC0003DMG400021911 Solanum tuberosum HOM05D004953 ORTHO05D006193 0.0e+00 1253.8 942 68.6
Haze_03508 Corylus avellana HOM05D004953 ORTHO05D006193 0.0e+00 1253.0 948 68.0
FAN24G2388 Fragaria x ananassa HOM05D004953 ORTHO05D006193 0.0e+00 1251.9 947 66.4
SalBow3G1227 Salvia bowleyana HOM05D004953 ORTHO05D006193 0.0e+00 1250.7 951 67.4
FvH4_2g17460 Fragaria vesca HOM05D004953 ORTHO05D006193 0.0e+00 1250.3 947 66.3
Prupe.8G186900 Prunus persica HOM05D004953 ORTHO05D006193 0.0e+00 1249.6 946 67.7
Nitab4.5_0008926g0010 Nicotiana tabacum HOM05D004953 ORTHO05D006193 0.0e+00 1249.2 929 68.4
Peaxi162Scf02239g00020 Petunia axillaris HOM05D004953 ORTHO05D006193 0.0e+00 1247.3 930 67.3
Nn1g09452 Nelumbo nucifera HOM05D004953 ORTHO05D006193 0.0e+00 1246.9 938 66.8
Cfa010574 Carpinus fangiana HOM05D004953 ORTHO05D006193 0.0e+00 1245.3 948 67.6
FAN15G1962 Fragaria x ananassa HOM05D004953 ORTHO05D006193 0.0e+00 1245.0 948 66.1
COL.COLO4_34276 Corchorus olitorius HOM05D004953 ORTHO05D006193 0.0e+00 1243.0 957 66.8
TWI36G1252 Tripterygium wilfordii HOM05D004953 ORTHO05D006193 0.0e+00 1239.6 949 66.8
Nitab4.5_0000038g0380 Nicotiana tabacum HOM05D004953 ORTHO05D006193 0.0e+00 1239.2 930 68.3
Potri.014G175350 Populus trichocarpa HOM05D004953 ORTHO05D006193 0.0e+00 1236.5 957 66.7
Thecc.01G207300 Theobroma cacao HOM05D004953 ORTHO05D006193 0.0e+00 1231.5 957 66.8
CAN.G1468.3 Capsicum annuum HOM05D004953 ORTHO05D006193 0.0e+00 1229.9 930 68.4
Cpa.g.sc8.38 Carica papaya HOM05D004953 ORTHO05D006193 0.0e+00 1229.9 956 66.2
Sabra14G0134100 Salix brachista HOM05D004953 ORTHO05D006193 0.0e+00 1228.4 952 66.4
Lj1g0025378 Lotus japonicus HOM05D004953 ORTHO05D006193 0.0e+00 1225.7 935 66.1
Solyc09g042760.2 Solanum lycopersicum HOM05D004953 ORTHO05D006193 0.0e+00 1223.8 928 67.8
CANSAT01G2219 Cannabis sativa HOM05D004953 ORTHO05D006193 0.0e+00 1219.9 959 65.1
Ca_08034_v3 Cicer arietinum L. HOM05D004953 ORTHO05D006193 0.0e+00 1219.9 937 65.8
CiPaw.13G055800 Carya illinoinensis HOM05D004953 ORTHO05D006193 0.0e+00 1215.3 937 66.9
Medtr7g080880 Medicago truncatula HOM05D004953 ORTHO05D006193 0.0e+00 1214.1 933 67.0
THA.LOC104819011 Tarenaya hassleriana HOM05D004953 ORTHO05D006193 0.0e+00 1213.0 941 64.4
Gorai.007G161300 Gossypium raimondii HOM05D004953 ORTHO05D006193 0.0e+00 1212.2 958 65.6
ECA236G0268 Erigeron canadensis HOM05D004953 ORTHO05D006193 0.0e+00 1209.9 933 66.1
Sopen09g015810 Solanum pennellii HOM05D004953 ORTHO05D006193 0.0e+00 1208.4 928 67.5
QL09p045412 Quercus lobata HOM05D004953 ORTHO05D006193 0.0e+00 1198.7 995 64.5
VMungo1383G3652 Vigna mungo HOM05D004953 ORTHO05D006193 0.0e+00 1188.3 930 64.3
GSVIVG01001528001 Vitis vinifera HOM05D004953 ORTHO05D006193 0.0e+00 1188.3 844 72.0
Ciclev10018269m.g Citrus clementina HOM05D004953 ORTHO05D006193 0.0e+00 1187.9 938 65.6
TPR.G35843 Trifolium pratense HOM05D004953 ORTHO05D006193 0.0e+00 1178.3 942 64.6
EL10Ac5g10584 Beta vulgaris HOM05D004953 ORTHO05D006193 0.0e+00 1173.7 944 63.7
Glyma.18G246600 Glycine max HOM05D004953 ORTHO05D006193 0.0e+00 1169.5 932 63.7
Eucgr.K00106 Eucalyptus grandis HOM05D004953 ORTHO05D006193 0.0e+00 1166.4 950 62.9
SGA_v2.0_scaffold8G04488 Striga asiatica HOM05D004953 ORTHO05D006193 0.0e+00 1166.4 949 64.0
Atru.BG.40.p Acer truncatum HOM05D004953 ORTHO05D006193 0.0e+00 1156.0 928 66.3
Thhalv10005371m.g Eutrema salsugineum HOM05D004953 ORTHO05D006193 0.0e+00 1156.0 943 62.0
Hund02809 Selenicereus undatus HOM05D004953 ORTHO05D006193 0.0e+00 1152.9 931 63.2
Sc17g0001570 Simmondsia chinensis HOM05D004953 ORTHO05D006193 0.0e+00 1151.3 946 63.6
Sed0024263 Sechium edule HOM05D004953 ORTHO05D006193 0.0e+00 1150.2 938 63.2
AT5G48390 Arabidopsis thaliana HOM05D004953 ORTHO05D006193 0.0e+00 1148.3 939 62.0
CsaV3_2G009520 Cucumis sativus L. HOM05D004953 ORTHO05D006193 0.0e+00 1148.3 913 63.7
AUR62028642 Chenopodium quinoa HOM05D004953 ORTHO05D006193 0.0e+00 1147.9 944 62.2
AL8G21200 Arabidopsis lyrata HOM05D004953 ORTHO05D006193 0.0e+00 1146.7 940 61.7
MELO3C008751.2 Cucumis melo HOM05D004953 ORTHO05D006193 0.0e+00 1146.7 916 63.6
CARHR183800 Cardamine hirsuta HOM05D004953 ORTHO05D006193 0.0e+00 1146.0 939 61.9
C07p39140 Brassica napus HOM05D004953 ORTHO05D006193 0.0e+00 1135.9 935 61.3
BolC7t44434H Brassica oleracea HOM05D004953 ORTHO05D006193 0.0e+00 1135.9 935 61.3
Aqoxy2G04177 Aquilegia oxysepala HOM05D004953 ORTHO05D006193 0.0e+00 1134.4 912 64.0
Sp2g18750 Schrenkiella parvula HOM05D004953 ORTHO05D006193 0.0e+00 1132.9 942 61.4
Carub.0008s0798 Capsella rubella HOM05D004953 ORTHO05D006193 0.0e+00 1131.3 933 61.7
A06p39200 Brassica napus HOM05D004953 ORTHO05D006193 0.0e+00 1127.5 935 60.9
arahy.Tifrunner.gnm1.ann1.57Z9Z9 Arachis hypogaea HOM05D004953 ORTHO05D006193 0.0e+00 1126.3 996 59.5
AUR62008065 Chenopodium quinoa HOM05D004953 ORTHO05D006193 0.0e+00 1124.4 949 61.7
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 0.0e+00 1116.7 830 71.3
SHI10219 Sapria himalayana HOM05D004953 ORTHO05D006193 0.0e+00 1114.8 957 59.8
Psat3g100880 Pisum sativum HOM05D004953 ORTHO05D006193 0.0e+00 1111.7 934 61.8
TAR365G0304 Trochodendron aralioides HOM05D004953 ORTHO05D006193 0.0e+00 1111.3 773 73.1
Aa31LG11G3580 Aethionema arabicum HOM05D004953 ORTHO05D006193 0.0e+00 1100.9 954 60.2
Gohir.A11G144000 Gossypium hirsutum HOM05D004953 ORTHO05D006193 0.0e+00 1092.0 834 66.9
PSO478G1281 Papaver somniferum HOM05D004953 ORTHO05D006193 0.0e+00 1091.3 944 61.2
PSO017G6601 Papaver somniferum HOM05D004953 ORTHO05D006193 0.0e+00 1085.1 944 61.0
ClCG11G010960 Citrullus lanatus HOM05D004953 ORTHO05D006193 0.0e+00 1078.2 944 60.6
MBI10_g23576_MAGBIO Magnolia biondii HOM05D004953 ORTHO05D006193 0.0e+00 1077.0 938 60.8
Aa31LG11G8930 Aethionema arabicum HOM05D004953 ORTHO05D006193 3.3e-298 1028.5 940 58.1
unitig_52.g16794 Utricularia gibba HOM05D004953 ORTHO05D006193 7.6e-295 1017.3 939 57.2
Phvul.008G050500 Phaseolus vulgaris HOM05D004953 ORTHO05D006193 2.2e-294 1015.8 803 63.6
DCAR_004775 Daucus carota HOM05D004953 ORTHO05D006193 3.1e-288 995.3 685 73.7
Sed0015090 Sechium edule HOM05D004953 ORTHO05D006193 1.2e-284 983.4 940 56.4
Gohir.D11G150400 Gossypium hirsutum HOM05D004953 ORTHO05D006193 1.2e-276 956.8 737 66.9
BcaC06g30800 Brassica carinata HOM05D004953 ORTHO05D006193 1.9e-266 922.9 818 57.0
HPP92_001916 Vanilla planifolia HOM05D004953 ORTHO05D006193 9.1e-248 860.9 942 49.9
Ah.11g050790 Amaranthus hybridus HOM05D004953 ORTHO05D006193 5.5e-229 798.5 653 63.4
CDE07G1537 Ceratophyllum demersum HOM05D004953 ORTHO05D006193 5.5e-229 798.5 938 47.7
Os01g0890900 Oryza sativa ssp. japonica HOM05D004953 ORTHO05D006193 1.8e-195 687.2 943 42.3
ATR0743G003 Amborella trichopoda HOM05D004953 ORTHO05D006193 1.5e-194 684.1 980 42.7
Lalb_Chr03g0040541 Lupinus albus HOM05D004953 ORTHO05D006193 3.4e-186 656.4 488 66.2
SEGI_29467 Sequoiadendron giganteum HOM05D004953 ORTHO05D006193 2.7e-183 646.7 954 40.6
Actinidia33396 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.3e-177 627.9 432 76.2
Actinidia33395 Actinidia chinensis HOM05D004953 ORTHO05D006193 8.7e-174 615.1 411 76.4
Glyma.09G246350 Glycine max HOM05D004953 ORTHO05D006193 9.3e-152 542.0 422 63.7
Zm00001eb145140 Zea mays HOM05D004953 ORTHO05D006193 1.6e-151 541.2 736 43.6
SMO201G0221 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 5.9e-146 522.7 888 36.7
Lalb_Chr03g0040531 Lupinus albus HOM05D004953 ORTHO05D006193 3.0e-142 510.4 463 61.6
Actinidia23342 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.4e-139 500.7 428 66.4
Pp3c2_410 Physcomitrium patens HOM05D004953 ORTHO05D006193 1.2e-130 471.9 887 35.5
CANSAT01G2868 Cannabis sativa HOM05D004953 ORTHO05D006193 1.7e-129 468.0 453 58.5
Mapoly0032s0035 Marchantia polymorpha HOM05D004953 ORTHO05D006193 4.7e-127 459.9 909 33.1
Actinidia12854 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.2e-121 441.0 265 82.3
FAN15G1853 Fragaria x ananassa HOM05D004953 ORTHO05D006193 8.4e-68 263.1 200 66.0
Actinidia23343 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.4e-54 219.2 143 76.2
TPR.G1778 Trifolium pratense HOM05D004953 ORTHO05D019267 3.9e-49 201.1 464 33.0
FvH4_2g09600 Fragaria vesca HOM05D004953 ORTHO05D006193 2.5e-43 181.8 344 36.0
FAN24G3373 Fragaria x ananassa HOM05D004953 ORTHO05D006193 7.9e-42 176.8 350 35.1
FAN11G3683 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.2e-36 158.7 344 32.6
Actinidia29995 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.5e-35 155.2 240 44.6
TAR365G0721 Trochodendron aralioides HOM05D004953 ORTHO05D006193 2.4e-30 138.7 140 56.4
FvH4_3g38850 Fragaria vesca HOM05D004953 ORTHO05D006193 3.1e-30 138.3 118 61.0
FvH4_4g15200 Fragaria vesca HOM05D004953 ORTHO05D006193 3.1e-30 138.3 131 56.5
FAN14G2335 Fragaria x ananassa HOM05D004953 ORTHO05D006193 6.7e-25 120.6 131 54.2
CSS0012475 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 8.8e-25 120.2 64 90.6
CSS0023073 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.3e-23 116.3 64 89.1
FvH4_6g36680 Fragaria vesca HOM05D004953 ORTHO05D006193 8.2e-23 113.6 129 47.3
Actinidia12853 Actinidia chinensis HOM05D001772 ORTHO05D000476 1.7e-20 105.9 137 46.7
FvH4_7g13151 Fragaria vesca HOM05D004953 ORTHO05D006193 1.7e-20 105.9 67 74.6
CSS0036997 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 8.5e-20 103.6 61 88.5
CSS0040358 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.4e-19 102.8 61 90.2
FAN14G2572 Fragaria x ananassa HOM05D004953 ORTHO05D006193 4.2e-19 101.3 73 63.0
FvH4_6g27414 Fragaria vesca HOM05D004953 ORTHO05D006193 5.5e-19 100.9 73 63.0
FvH4_4g10312 Fragaria vesca HOM05D004953 ORTHO05D006193 1.2e-18 99.8 73 63.0
FvH4_2g12761 Fragaria vesca HOM05D004953 ORTHO05D006193 7.9e-18 97.1 113 45.1
FvH4_6g36881 Fragaria vesca HOM05D004953 ORTHO05D006193 1.0e-17 96.7 73 60.3
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 4.4e-16 91.3 81 55.6
Actinidia04704 Actinidia chinensis HOM05D004953 ORTHO05D006193 3.5e-13 81.6 241 31.5
FvH4_4g15182 Fragaria vesca HOM05D004953 ORTHO05D006193 1.0e-12 80.1 46 76.1
SMO203G0177 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 2.7e-10 72.0 173 30.1
FvH4_7g08382 Fragaria vesca HOM05D004953 ORTHO05D006193 4.7e-10 71.2 55 56.4
SMO203G0202 Selaginella moellendorffii HOM05D003498 ORTHO05D006193 6.1e-10 70.9 69 47.8
FAN14G1126 Fragaria x ananassa HOM05D004953 ORTHO05D006193 3.0e-09 68.6 55 56.4
FAN09G3899 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.0e-08 65.9 55 52.7
Pp3c19_1150 Physcomitrium patens HOM05D004953 ORTHO05D006193 4.4e-08 64.7 90 36.7
FAN14G1607 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.7e-07 62.8 60 61.7
FAN24G1763 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.7e-07 62.8 38 73.7
TPR.G3742 Trifolium pratense HOM05D004953 ORTHO05D006193 2.2e-07 62.4 38 76.3
PRCOL_00006857 Prasinoderma coloniale HOM05D004953 ORTHO05D006193 7.0e-06 57.4 135 26.7


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