Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005155 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.9e-138 495.7 237 100.0
CSS0019957 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 8.4e-110 400.6 254 80.7
CSS0002423 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 3.5e-108 395.2 254 79.9
CSS0037116 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.3e-107 392.5 254 79.5
Dinv07263 Davidia involucrata HOM05D005859 ORTHO05D007576 2.2e-102 375.9 254 76.0
Haze_21816 Corylus avellana HOM05D005859 ORTHO05D007576 1.2e-100 370.2 254 73.2
Rhsim05G0088100 Rhododendron simsii HOM05D005859 ORTHO05D007576 2.1e-100 369.4 254 74.4
CANSAT64G2965 Cannabis sativa HOM05D005859 ORTHO05D007576 7.9e-100 367.5 254 73.6
Cfa013324 Carpinus fangiana HOM05D005859 ORTHO05D007576 1.0e-99 367.1 252 73.0
CSS0022235 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.8e-99 366.3 254 74.4
Rhsim02G0125100 Rhododendron simsii HOM05D005859 ORTHO05D007576 1.8e-99 366.3 252 75.0
Duzib151G0554 Durio zibethinus HOM05D005859 ORTHO05D007576 2.3e-99 365.9 249 73.9
Actinidia22411 Actinidia chinensis HOM05D005859 ORTHO05D007576 1.9e-98 362.8 254 73.2
Gohir.A09G063900 Gossypium hirsutum HOM05D005859 ORTHO05D007576 2.5e-98 362.5 252 73.0
VMungo1309G0784 Vigna mungo HOM05D005859 ORTHO05D007576 2.5e-98 362.5 252 73.8
QL12p026076 Quercus lobata HOM05D005859 ORTHO05D007576 3.3e-98 362.1 250 73.6
COL.COLO4_34684 Corchorus olitorius HOM05D005859 ORTHO05D007576 5.7e-98 361.3 249 73.1
Gohir.D09G062800 Gossypium hirsutum HOM05D005859 ORTHO05D007576 7.4e-98 360.9 249 73.9
Ciclev10009277m.g Citrus clementina HOM05D005859 ORTHO05D007576 1.3e-97 360.1 250 73.2
CiPaw.07G208600 Carya illinoinensis HOM05D005859 ORTHO05D007576 1.6e-97 359.8 249 73.1
CSS0049229 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.8e-97 359.0 243 77.0
Glyma.04G078700 Glycine max HOM05D005859 ORTHO05D007576 2.8e-97 359.0 252 73.8
Lj1g0020437 Lotus japonicus HOM05D005859 ORTHO05D007576 3.7e-97 358.6 252 73.0
Atru.chr7.2673 Acer truncatum HOM05D005859 ORTHO05D007576 6.3e-97 357.8 250 72.8
Gorai.006G077600 Gossypium raimondii HOM05D005859 ORTHO05D007576 6.3e-97 357.8 249 73.5
ClCG08G012440 Citrullus lanatus HOM05D005859 ORTHO05D007576 8.2e-97 357.5 249 73.1
MELO3C011163.2 Cucumis melo HOM05D005859 ORTHO05D007576 8.2e-97 357.5 249 73.1
Thecc.04G293600 Theobroma cacao HOM05D005859 ORTHO05D007576 8.2e-97 357.5 250 72.8
Ca_15630_v3 Cicer arietinum L. HOM05D005859 ORTHO05D007576 1.1e-96 357.1 252 73.4
Phvul.009G104500 Phaseolus vulgaris HOM05D005859 ORTHO05D007576 1.1e-96 357.1 252 73.4
Manes.08G049200 Manihot esculenta HOM05D005859 ORTHO05D007576 1.8e-96 356.3 252 72.2
Cpa.g.sc10.203 Carica papaya HOM05D005859 ORTHO05D007576 2.4e-96 355.9 250 72.4
CsaV3_2G031130 Cucumis sativus L. HOM05D005859 ORTHO05D007576 2.4e-96 355.9 249 72.7
Sabra06G0214800 Salix brachista HOM05D005859 ORTHO05D007576 5.3e-96 354.8 254 71.3
Sc10g0009100 Simmondsia chinensis HOM05D005859 ORTHO05D007576 5.3e-96 354.8 252 71.4
Duzib151G0446 Durio zibethinus HOM05D005859 ORTHO05D007576 6.9e-96 354.4 249 72.3
Potri.006G277100 Populus trichocarpa HOM05D005859 ORTHO05D007576 1.2e-95 353.6 254 71.3
Prupe.1G454800 Prunus persica HOM05D005859 ORTHO05D007576 1.5e-95 353.2 254 71.7
TWI63G1176 Tripterygium wilfordii HOM05D005859 ORTHO05D007576 2.0e-95 352.8 252 70.6
Psat5g022960 Pisum sativum HOM05D005859 ORTHO05D007576 5.9e-95 351.3 249 71.1
Sed0013908 Sechium edule HOM05D005859 ORTHO05D007576 7.7e-95 350.9 249 71.9
Sed0022456 Sechium edule HOM05D005859 ORTHO05D007576 2.9e-94 349.0 249 71.9
Glyma.06G080300 Glycine max HOM05D005859 ORTHO05D007576 6.5e-94 347.8 252 71.8
Oeu056039.1 Olea europaea HOM05D005859 ORTHO05D007576 1.4e-93 346.7 252 69.8
RcHm_v2.0_Chr6g0305541 Rosa chinensis HOM05D005859 ORTHO05D007576 1.4e-93 346.7 254 70.1
Potri.018G003900 Populus trichocarpa HOM05D005859 ORTHO05D007576 3.2e-93 345.5 254 69.7
DCAR_010833 Daucus carota HOM05D005859 ORTHO05D007576 4.2e-93 345.1 249 71.9
MD08G1121000 Malus domestica HOM05D005859 ORTHO05D007576 4.2e-93 345.1 254 69.7
ECA238G0328 Erigeron canadensis HOM05D005859 ORTHO05D007576 7.2e-93 344.4 251 70.5
Ah.07g199340 Amaranthus hybridus HOM05D005859 ORTHO05D007576 9.4e-93 344.0 254 68.9
FvH4_2g36340 Fragaria vesca HOM05D005859 ORTHO05D007576 1.6e-92 343.2 254 69.7
FAN15G0047 Fragaria x ananassa HOM05D005859 ORTHO05D007576 1.6e-92 343.2 254 69.7
Lsat_1_v5_gn_5_41801 Lactuca sativa HOM05D005859 ORTHO05D007576 1.6e-92 343.2 249 71.1
FAN20G1422 Fragaria x ananassa HOM05D005859 ORTHO05D007576 2.7e-92 342.4 254 69.3
Medtr3g109360 Medicago truncatula HOM05D005859 ORTHO05D007576 2.7e-92 342.4 252 69.8
Lalb_Chr11g0064301 Lupinus albus HOM05D005859 ORTHO05D007576 4.6e-92 341.7 250 70.4
AUR62007184 Chenopodium quinoa HOM05D005859 ORTHO05D007576 6.1e-92 341.3 252 68.7
TPR.G1368 Trifolium pratense HOM05D005859 ORTHO05D007576 6.1e-92 341.3 252 69.4
Sabra18G0001700 Salix brachista HOM05D005859 ORTHO05D007576 7.9e-92 340.9 254 69.7
Eucgr.A02021 Eucalyptus grandis HOM05D005859 ORTHO05D007576 1.0e-91 340.5 254 67.3
Sabra18G0009500 Salix brachista HOM05D005859 ORTHO05D007576 1.8e-91 339.7 254 69.7
TAR625G0738 Trochodendron aralioides HOM05D005859 ORTHO05D007576 3.0e-91 339.0 262 67.6
THA.LOC104814931 Tarenaya hassleriana HOM05D005859 ORTHO05D007576 3.9e-91 338.6 249 69.1
EL10Ac5g12246 Beta vulgaris HOM05D005859 ORTHO05D007576 3.3e-90 335.5 251 68.1
PGR042G0112 Punica granatum HOM05D005859 ORTHO05D007576 1.7e-89 333.2 252 66.3
Nn2g12765 Nelumbo nucifera HOM05D005859 ORTHO05D007576 2.8e-89 332.4 259 66.8
MSTRG.12122 Avicennia marina HOM05D005859 ORTHO05D007576 6.3e-89 331.3 251 68.9
Migut.A01131 Erythranthe guttata HOM05D005859 ORTHO05D007576 6.9e-88 327.8 254 68.9
C07p42930 Brassica napus HOM05D005859 ORTHO05D008158 2.0e-87 326.2 250 66.8
BolC7t44822H Brassica oleracea HOM05D005859 ORTHO05D008158 2.0e-87 326.2 250 66.8
Aa31LG11G4050 Aethionema arabicum HOM05D005859 ORTHO05D007576 2.6e-87 325.9 248 69.0
A06p35610 Brassica napus HOM05D005859 ORTHO05D007576 2.6e-87 325.9 250 67.2
Nitab4.5_0003379g0070 Nicotiana tabacum HOM05D005859 ORTHO05D007576 2.6e-87 325.9 250 67.6
Thhalv10004821m.g Eutrema salsugineum HOM05D005859 ORTHO05D007576 3.4e-87 325.5 249 66.3
CARHR188610 Cardamine hirsuta HOM05D005859 ORTHO05D007576 4.5e-87 325.1 249 66.7
AL6G36490 Arabidopsis lyrata HOM05D005859 ORTHO05D007576 7.7e-87 324.3 250 66.8
CSS0033509 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 7.7e-87 324.3 202 80.2
Cc09_g05860 Coffea canephora HOM05D005859 ORTHO05D007576 7.7e-87 324.3 245 67.8
Nitab4.5_0006282g0050 Nicotiana tabacum HOM05D005859 ORTHO05D007576 7.7e-87 324.3 250 67.6
SGA_v2.0_scaffold104G30176 Striga asiatica HOM05D005859 ORTHO05D007576 1.0e-86 323.9 245 69.4
Sp2g22610 Schrenkiella parvula HOM05D005859 ORTHO05D007576 5.0e-86 321.6 249 65.1
AT5G24840 Arabidopsis thaliana HOM05D005859 ORTHO05D007576 8.5e-86 320.9 240 68.8
CAN.G149.19 Capsicum annuum HOM05D005859 ORTHO05D007576 8.5e-86 320.9 241 68.0
SalBow1G3786 Salvia bowleyana HOM05D005859 ORTHO05D007576 8.5e-86 320.9 254 67.3
Carub.0006s2269 Capsella rubella HOM05D005859 ORTHO05D007576 1.4e-85 320.1 240 68.3
PSO063G7086 Papaver somniferum HOM05D005859 ORTHO05D007576 3.2e-85 318.9 264 62.9
BcaB04g19801 Brassica carinata HOM05D005859 ORTHO05D007576 7.2e-85 317.8 249 65.5
MBI07_g41262_MAGBIO Magnolia biondii HOM05D005859 ORTHO05D007576 9.4e-85 317.4 251 64.9
PGSC0003DMG400010428 Solanum tuberosum HOM05D005859 ORTHO05D007576 1.2e-84 317.0 245 66.1
Sopen02g017820 Solanum pennellii HOM05D005859 ORTHO05D007576 2.1e-84 316.2 239 66.9
Solyc02g068650.2 Solanum lycopersicum HOM05D005859 ORTHO05D007576 4.7e-84 315.1 240 67.1
Aqoxy7G02813 Aquilegia oxysepala HOM05D005859 ORTHO05D007576 8.8e-83 310.8 250 66.4
BcaC04g23549 Brassica carinata HOM05D005859 ORTHO05D007576 8.8e-83 310.8 250 62.8
unitig_21.g20313 Utricularia gibba HOM05D005859 ORTHO05D007576 1.3e-81 307.0 237 65.8
Peaxi162Scf00149g00014 Petunia axillaris HOM05D005859 ORTHO05D007576 2.8e-81 305.8 248 64.5
HPP92_010546 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.4e-80 303.5 244 63.5
HPP92_010527 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.7e-78 296.6 241 63.1
Zm00001eb208790 Zea mays HOM05D005859 ORTHO05D007576 1.1e-77 293.9 242 62.4
CSS0043283 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.0e-75 287.3 242 64.5
ATR0697G154 Amborella trichopoda HOM05D005859 ORTHO05D007576 2.3e-75 286.2 241 60.6
MD15G1100000 Malus domestica HOM05D005859 ORTHO05D007576 6.7e-75 284.6 231 64.1
HanXRQChr14g0440281 Helianthus annuus HOM05D005859 ORTHO05D007576 5.7e-74 281.6 192 73.4
SEGI_16955 Sequoiadendron giganteum HOM05D005859 ORTHO05D007576 5.3e-72 275.0 268 53.4
AUR62018819 Chenopodium quinoa HOM05D005859 ORTHO05D007576 5.9e-71 271.6 252 58.3
SMO358G0125 Selaginella moellendorffii HOM05D005859 ORTHO05D007576 4.2e-69 265.4 239 55.6
Pp3c24_9600 Physcomitrium patens HOM05D005859 ORTHO05D007576 5.5e-69 265.0 236 55.9
GSVIVG01035552001 Vitis vinifera HOM05D005859 ORTHO05D007576 2.1e-68 263.1 237 62.0
Mapoly0026s0057 Marchantia polymorpha HOM05D005859 ORTHO05D007576 1.0e-67 260.8 269 51.3
AagrBONN_evm.TU.Sc2ySwM_344.1368 Anthoceros agrestis HOM05D005859 ORTHO05D007576 2.6e-66 256.1 255 52.5
CDE05G2856 Ceratophyllum demersum HOM05D005859 ORTHO05D007576 2.0e-63 246.5 194 66.5
CBR_g63067 Chara braunii HOM05D005859 ORTHO05D007576 4.5e-63 245.4 268 48.5
HPP92_010585 Vanilla planifolia HOM05D005859 ORTHO05D007576 7.7e-63 244.6 188 67.0
CSS0012487 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 3.4e-58 229.2 243 53.9
Cre07.g314550 Chlamydomonas reinhardtii HOM05D005859 ORTHO05D007576 7.5e-58 228.0 256 46.9
MCO01G481 Micromonas commoda HOM05D005859 ORTHO05D007576 4.5e-55 218.8 239 46.9
Lj2P347T15 Lonicera japonica HOM05D005859 ORTHO05D007576 3.4e-50 202.6 160 68.1
HanXRQChr07g0193381 Helianthus annuus HOM05D005859 ORTHO05D007576 4.4e-50 202.2 162 66.7
HanXRQChr09g0275211 Helianthus annuus HOM05D005859 ORTHO05D007576 2.2e-49 199.9 160 65.0
PRCOL_00003713 Prasinoderma coloniale HOM05D005859 ORTHO05D007576 6.3e-49 198.4 235 45.5
Dinv07265 Davidia involucrata HOM05D005859 ORTHO05D007576 2.4e-48 196.4 137 75.9
CSS0016583 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 3.6e-44 182.6 108 82.4
HPP92_010304 Vanilla planifolia HOM05D005859 ORTHO05D007576 5.8e-42 175.3 195 50.3
Haze_26141 Corylus avellana HOM05D005859 ORTHO05D007576 1.7e-38 163.7 234 38.5
BolC9t53628H Brassica oleracea HOM05D005859 ORTHO05D007576 6.6e-38 161.8 119 66.4
HPP92_010638 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.6e-36 157.1 117 66.7
CSS0020153 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.2e-31 141.0 150 52.7
HPP92_010538 Vanilla planifolia HOM05D005859 ORTHO05D007576 6.6e-30 135.2 104 64.4
BraA06t26486Z Brassica rapa HOM05D000880 ORTHO05D008158 4.1e-24 115.9 83 72.3
C09p07080 Brassica napus HOM05D000880 ORTHO05D008158 2.7e-23 113.2 85 68.2
Os06g0236900 Oryza sativa ssp. japonica HOM05D005859 ORTHO05D007576 6.8e-19 98.6 82 61.0
BolC9t53624H Brassica oleracea HOM05D000880 ORTHO05D008158 4.8e-12 75.9 45 80.0
A09p06390 Brassica napus HOM05D000880 ORTHO05D008158 1.1e-08 64.7 37 83.8
CDE11G0447 Ceratophyllum demersum HOM05D005695 ORTHO05D007810 6.0e-07 58.9 147 32.7
PSO782G5257 Papaver somniferum HOM05D005695 ORTHO05D007810 3.0e-06 56.6 185 29.2


User provided reference genes

Program Settings