Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 6.9e-63 243.8 125 100.0
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 6.9e-63 243.8 125 100.0
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 1.5e-49 199.5 122 80.3
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 1.5e-49 199.5 122 80.3
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 2.8e-48 195.3 122 82.0
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 3.2e-44 181.8 122 74.6
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 2.3e-42 175.6 129 69.8
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 2.0e-41 172.6 123 72.4
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 4.8e-40 167.9 125 69.6
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 6.3e-40 167.5 117 71.8
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 1.1e-39 166.8 125 67.2
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.1e-39 166.8 117 70.9
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 1.8e-39 166.0 130 66.2
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 7.0e-39 164.1 117 69.2
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 1.2e-38 163.3 126 69.0
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 1.6e-38 162.9 123 69.1
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 1.6e-38 162.9 126 68.3
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 4.5e-38 161.4 125 64.0
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 4.5e-38 161.4 120 65.0
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 4.5e-38 161.4 117 69.2
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 2.3e-37 159.1 130 66.2
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 5.0e-37 157.9 125 64.8
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 6.5e-37 157.5 117 65.0
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 8.6e-37 157.1 125 63.2
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 1.5e-36 156.4 120 62.5
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 3.3e-36 155.2 120 60.8
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 7.2e-36 154.1 127 61.4
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 7.2e-36 154.1 124 66.1
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 9.5e-36 153.7 122 63.1
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 9.5e-36 153.7 126 63.5
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 9.5e-36 153.7 114 69.3
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 1.2e-35 153.3 120 60.8
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 1.6e-35 152.9 117 65.8
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 2.1e-35 152.5 117 66.7
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 3.6e-35 151.8 128 64.1
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 6.1e-35 151.0 127 62.2
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 8.0e-35 150.6 117 66.7
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 1.8e-34 149.4 120 61.7
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 1.8e-34 149.4 123 61.8
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 2.3e-34 149.1 117 65.0
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 5.2e-34 147.9 125 64.0
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 6.8e-34 147.5 124 63.7
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 6.8e-34 147.5 116 67.2
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 1.2e-33 146.7 119 62.2
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 1.2e-33 146.7 126 65.1
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 1.5e-33 146.4 135 60.0
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 1.5e-33 146.4 140 60.0
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 2.0e-33 146.0 123 59.3
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.6e-33 145.6 128 60.9
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 3.4e-33 145.2 121 62.8
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 5.7e-33 144.4 125 59.2
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 5.7e-33 144.4 124 63.7
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 7.5e-33 144.1 119 60.5
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 9.8e-33 143.7 122 61.5
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 9.8e-33 143.7 135 56.3
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 1.3e-32 143.3 135 56.3
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 3.7e-32 141.7 128 60.9
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 6.3e-32 141.0 117 65.0
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 6.3e-32 141.0 127 59.8
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 6.3e-32 141.0 117 65.0
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 8.3e-32 140.6 128 60.2
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.1e-31 140.2 129 57.4
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 1.1e-31 140.2 128 58.6
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.4e-31 139.8 128 59.4
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 1.8e-31 139.4 125 60.8
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 3.1e-31 138.7 130 58.5
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 4.1e-31 138.3 130 58.5
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 7.0e-31 137.5 120 63.3
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 7.0e-31 137.5 120 56.7
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 7.0e-31 137.5 92 71.7
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 7.0e-31 137.5 120 60.8
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 7.0e-31 137.5 117 60.7
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 9.2e-31 137.1 115 59.1
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 9.2e-31 137.1 128 57.0
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 2.0e-30 136.0 122 58.2
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 3.5e-30 135.2 139 56.8
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 3.5e-30 135.2 117 61.5
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 4.5e-30 134.8 130 57.7
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 1.3e-29 133.3 121 57.9
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 3.8e-29 131.7 119 58.0
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 8.6e-29 130.6 123 56.9
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 1.5e-28 129.8 112 61.6
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 2.5e-28 129.0 121 57.9
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 9.5e-28 127.1 120 53.3
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 2.8e-27 125.6 130 53.8
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 4.7e-27 124.8 118 56.8
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 6.1e-27 124.4 119 55.5
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 8.0e-27 124.0 120 59.2
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 1.4e-26 123.2 117 57.3
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 1.8e-26 122.9 117 54.7
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 2.3e-26 122.5 117 53.8
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 2.3e-26 122.5 117 53.8
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 4.0e-26 121.7 118 55.9
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 5.2e-26 121.3 116 56.0
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 1.2e-25 120.2 118 57.6
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 1.3e-24 116.7 111 61.3
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 1.4e-23 113.2 72 70.8
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 4.1e-23 111.7 81 67.9
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 5.4e-23 111.3 98 56.1
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 3.5e-22 108.6 118 50.8
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 8.9e-18 94.0 78 66.7
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 2.0e-17 92.8 79 60.8
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 2.9e-16 89.0 46 87.0
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 4.9e-16 88.2 77 64.9
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 6.0e-14 81.3 45 80.0
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 7.3e-12 74.3 76 52.6
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 7.3e-12 74.3 57 54.4
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 6.2e-11 71.2 97 39.2
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 1.1e-10 70.5 85 44.7
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 1.4e-10 70.1 100 40.0
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 7.5e-09 64.3 73 47.9


User provided reference genes

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