Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 8.6e-120 433.7 227 100.0
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 4.4e-108 394.8 227 89.4
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 1.7e-107 392.9 227 89.0
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 6.0e-105 384.4 227 87.2
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 8.6e-104 380.6 227 85.5
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 1.9e-103 379.4 237 83.5
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 1.1e-101 373.6 267 75.7
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 6.4e-99 364.4 227 82.8
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 2.4e-98 362.5 227 82.4
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 2.4e-98 362.5 227 82.4
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 1.2e-97 360.1 227 80.6
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 2.7e-97 359.0 227 82.8
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 7.8e-97 357.5 225 80.9
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 6.6e-96 354.4 227 79.7
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 1.1e-95 353.6 226 80.1
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 1.9e-95 352.8 227 80.6
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 7.3e-95 350.9 227 79.3
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 7.3e-95 350.9 227 78.4
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 2.8e-94 349.0 225 78.2
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 1.1e-93 347.1 227 78.9
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 1.4e-93 346.7 227 78.0
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.8e-93 346.3 227 77.5
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.8e-93 346.3 227 77.5
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 3.1e-93 345.5 227 78.4
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 4.0e-93 345.1 227 80.2
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 5.3e-93 344.7 227 78.4
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 6.9e-93 344.4 227 77.5
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 6.9e-93 344.4 225 79.1
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 9.0e-93 344.0 227 77.1
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 2.0e-92 342.8 225 78.7
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 2.0e-92 342.8 225 78.7
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 2.6e-92 342.4 225 78.2
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 2.6e-92 342.4 227 75.3
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 2.6e-92 342.4 227 73.6
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 3.4e-92 342.0 217 82.0
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 7.6e-92 340.9 260 70.4
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 7.6e-92 340.9 227 76.2
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 1.3e-91 340.1 227 76.7
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 1.7e-91 339.7 225 76.9
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 2.2e-91 339.3 227 76.7
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 2.2e-91 339.3 227 76.7
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 3.8e-91 338.6 224 78.1
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 4.9e-91 338.2 224 77.2
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 8.4e-91 337.4 227 74.4
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 1.4e-90 336.7 227 75.3
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 1.9e-90 336.3 227 76.2
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 2.4e-90 335.9 224 75.9
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 2.4e-90 335.9 227 75.8
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 4.2e-90 335.1 227 75.3
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 4.2e-90 335.1 227 76.7
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 4.2e-90 335.1 224 75.4
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 4.2e-90 335.1 250 70.8
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 5.4e-90 334.7 227 75.3
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 5.4e-90 334.7 227 75.8
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 7.1e-90 334.3 224 75.0
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 1.6e-89 333.2 228 76.3
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 1.3e-88 330.1 227 75.3
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 3.9e-88 328.6 228 74.6
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 6.6e-88 327.8 210 79.0
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 7.3e-87 324.3 224 72.3
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 7.3e-87 324.3 221 74.7
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 3.1e-85 318.9 227 72.7
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 1.2e-84 317.0 227 72.2
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 2.6e-84 315.8 227 73.1
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 4.5e-84 315.1 242 69.4
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 7.6e-84 314.3 207 76.8
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 6.4e-83 311.2 227 69.2
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 8.4e-83 310.8 203 78.8
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 1.4e-82 310.1 225 69.8
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 1.9e-82 309.7 227 73.6
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 1.9e-82 309.7 227 67.8
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 7.1e-82 307.8 224 71.4
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 1.2e-81 307.0 227 68.3
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 1.2e-81 307.0 227 68.3
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 2.1e-81 306.2 225 72.4
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 7.9e-81 304.3 221 71.0
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 1.0e-80 303.9 194 80.9
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 1.3e-80 303.5 227 67.4
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 3.9e-80 302.0 227 70.0
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 3.9e-80 302.0 224 71.0
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 6.7e-80 301.2 225 68.0
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 8.7e-80 300.8 232 69.0
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 1.1e-79 300.4 227 67.0
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 1.1e-79 300.4 227 67.0
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 2.5e-79 299.3 210 71.0
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 5.6e-79 298.1 227 66.5
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 5.6e-79 298.1 227 66.5
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 5.6e-79 298.1 227 66.5
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 5.6e-79 298.1 224 70.1
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.4e-77 293.5 227 67.8
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 1.8e-77 293.1 227 68.3
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 1.5e-76 290.0 242 65.7
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 1.1e-74 283.9 195 75.9
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 5.5e-74 281.6 227 63.4
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 1.5e-68 263.5 198 68.2
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 2.6e-68 262.7 222 62.6
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 2.6e-68 262.7 222 62.6
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 5.8e-68 261.5 214 62.6
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 3.2e-66 255.8 207 62.8
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 5.5e-66 255.0 222 61.7
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 7.1e-66 254.6 224 59.4
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 3.9e-64 248.8 223 59.2
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 8.2e-62 241.1 221 54.3
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 1.4e-61 240.4 193 64.8
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 1.8e-56 223.4 208 54.3
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 2.4e-53 213.0 139 76.3
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 8.5e-51 204.5 184 63.6
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 2.6e-47 193.0 213 47.9
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 5.5e-42 175.3 200 47.0
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 7.2e-42 174.9 210 50.0
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 6.1e-33 145.2 94 73.4
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 6.3e-30 135.2 163 52.1
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 3.5e-28 129.4 99 69.7
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 1.5e-18 97.4 220 29.5
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 4.3e-18 95.9 194 31.4
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 2.0e-12 77.0 214 29.0
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 3.4e-07 59.7 106 42.5
C05p10030 Brassica napus HOM05D006955 ORTHO05D008701 5.8e-07 58.9 35 74.3
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 7.5e-07 58.5 95 43.2


User provided reference genes

Program Settings