Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 9.7e-166 586.6 278 100.0
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 2.4e-116 422.5 293 72.4
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 9.9e-102 374.0 293 63.5
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 6.0e-99 364.8 292 63.7
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 5.1e-98 361.7 265 63.8
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 7.3e-97 357.8 294 60.9
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 1.4e-95 353.6 293 61.4
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 9.0e-95 350.9 290 58.6
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 4.9e-93 345.1 294 58.8
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 1.9e-92 343.2 295 58.3
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 4.2e-92 342.0 303 56.4
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 7.9e-91 337.8 294 56.5
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.0e-90 335.9 279 59.1
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 8.7e-90 334.3 294 56.5
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 1.9e-89 333.2 293 58.0
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 2.5e-89 332.8 296 56.8
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 3.3e-89 332.4 296 56.8
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 4.3e-89 332.0 292 56.5
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 1.3e-88 330.5 294 58.8
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 8.1e-88 327.8 327 53.8
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 6.9e-87 324.7 278 60.8
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 2.6e-86 322.8 293 55.6
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 3.4e-86 322.4 291 56.4
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 9.9e-86 320.9 335 51.0
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 2.2e-85 319.7 294 56.1
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.9e-85 319.3 301 54.8
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 3.8e-85 318.9 290 55.5
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 9.3e-84 314.3 270 58.5
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 1.2e-83 313.9 294 57.8
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 2.1e-83 313.2 294 57.5
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 2.1e-83 313.2 307 55.4
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 1.0e-82 310.8 296 56.1
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 3.9e-82 308.9 264 58.0
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 3.9e-82 308.9 295 54.9
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 1.1e-81 307.4 303 53.1
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 1.1e-81 307.4 293 53.2
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.5e-81 307.0 293 54.6
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 1.9e-81 306.6 293 56.3
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 2.5e-81 306.2 293 54.3
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 3.3e-81 305.8 294 55.8
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 5.6e-81 305.1 303 53.1
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 9.6e-81 304.3 303 52.8
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 4.8e-80 302.0 296 52.7
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 6.9e-79 298.1 305 54.4
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 9.0e-79 297.7 299 51.8
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 5.8e-78 295.0 289 52.9
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 1.0e-77 294.3 297 51.2
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.0e-77 294.3 303 51.8
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 2.9e-77 292.7 286 56.3
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 2.9e-77 292.7 291 53.6
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 2.7e-75 286.2 218 66.5
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 1.5e-73 280.4 297 52.2
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 4.3e-73 278.9 291 50.5
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.3e-72 277.3 292 50.3
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 5.3e-71 271.9 349 43.3
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 4.5e-70 268.9 296 51.4
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 2.9e-69 266.2 177 74.6
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 2.9e-69 266.2 294 50.0
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 5.0e-69 265.4 296 51.0
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 1.1e-68 264.2 315 47.9
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 1.4e-66 257.3 216 60.6
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 2.0e-65 253.4 296 46.6
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 4.3e-65 252.3 348 45.1
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 4.8e-64 248.8 305 44.6
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 9.1e-63 244.6 350 40.9
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 9.1e-63 244.6 288 47.2
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 7.7e-62 241.5 197 63.5
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 1.7e-61 240.4 162 70.4
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 3.8e-61 239.2 296 44.6
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 1.9e-60 236.9 293 44.0
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 1.0e-58 231.1 307 42.3
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 1.3e-56 224.2 193 57.0
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 3.7e-56 222.6 293 43.3
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 3.1e-55 219.5 224 51.3
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 5.9e-54 215.3 306 39.9
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 7.7e-54 214.9 226 52.2
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 2.2e-53 213.4 304 39.8
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 2.2e-53 213.4 307 39.4
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 2.9e-53 213.0 306 39.9
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.9e-53 213.0 256 46.9
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 6.5e-53 211.8 306 39.2
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 1.1e-52 211.1 301 40.5
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.4e-52 210.7 282 46.1
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 1.2e-51 207.6 304 37.8
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 6.1e-51 205.3 317 37.9
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 1.4e-50 204.1 338 36.4
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 1.4e-50 204.1 295 38.0
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 3.9e-50 202.6 311 37.6
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 4.4e-49 199.1 281 42.3
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 6.3e-48 195.3 249 44.6
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 1.4e-47 194.1 301 38.5
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 4.5e-46 189.1 284 39.1
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 1.1e-44 184.5 271 37.6
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 2.5e-44 183.3 184 50.5
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 2.7e-43 179.9 278 37.8
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 3.5e-38 162.9 265 32.8
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 1.3e-37 161.0 159 52.2
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 3.2e-36 156.4 277 38.6
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 6.1e-35 152.1 299 31.1
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 2.6e-33 146.7 89 74.2
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 1.6e-27 127.5 105 61.9
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 1.2e-25 121.3 277 30.3
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.5e-25 120.9 78 70.5
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 7.5e-25 118.6 282 29.4
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 1.7e-24 117.5 105 53.3
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 3.2e-15 86.7 190 30.5
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 4.6e-14 82.8 99 44.4
QL01p005881 Quercus lobata HOM05D006389 ORTHO05D007863 9.8e-09 65.1 54 57.4
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 5.4e-07 59.3 66 50.0
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 9.2e-07 58.5 34 67.6


User provided reference genes

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