Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004101 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 6.5e-69 263.8 126 100.0
CSS0007559 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 1.5e-68 262.7 126 99.2
vmacro00552 Vaccinium macrocarpon HOM05D006178 ORTHO05D007504 2.5e-52 208.8 110 86.4
Actinidia38440 Actinidia chinensis HOM05D006178 ORTHO05D007504 2.3e-50 202.2 106 86.8
Lj6C738G3 Lonicera japonica HOM05D001486 ORTHO05D007504 3.7e-48 194.9 105 83.8
Hma1.2p1_0277F.1_g111690 Hydrangea macrophylla HOM05D006178 ORTHO05D007504 1.6e-46 189.5 104 81.7
RcHm_v2.0_Chr7g0235121 Rosa chinensis HOM05D006178 ORTHO05D007504 1.7e-45 186.0 104 80.8
QL03p035908 Quercus lobata HOM05D006178 ORTHO05D007504 2.3e-45 185.7 106 78.3
MD13G1020300 Malus domestica HOM05D006178 ORTHO05D007504 3.0e-45 185.3 104 81.7
Duzib251G0568 Durio zibethinus HOM05D006178 ORTHO05D007504 1.5e-44 183.0 104 81.7
TWI74G1561 Tripterygium wilfordii HOM05D006178 ORTHO05D007504 2.5e-44 182.2 105 79.0
Eucgr.B02675 Eucalyptus grandis HOM05D006178 ORTHO05D007504 3.3e-44 181.8 105 72.4
GSVIVG01011660001 Vitis vinifera HOM05D006178 ORTHO05D007504 3.3e-44 181.8 104 77.9
CiPaw.05G188700 Carya illinoinensis HOM05D006178 ORTHO05D007504 4.3e-44 181.4 106 79.2
CsaV3_5G015780 Cucumis sativus L. HOM05D006178 ORTHO05D007504 4.3e-44 181.4 104 76.0
Prupe.1G333400 Prunus persica HOM05D006178 ORTHO05D007504 4.3e-44 181.4 104 78.8
FAN07G2930 Fragaria x ananassa HOM05D006178 ORTHO05D007504 5.6e-44 181.0 104 78.8
Thecc.02G292800 Theobroma cacao HOM05D006178 ORTHO05D007504 5.6e-44 181.0 104 80.8
FAN22G2090 Fragaria x ananassa HOM05D006178 ORTHO05D007504 7.3e-44 180.6 104 79.8
ClCG09G011820 Citrullus lanatus HOM05D006178 ORTHO05D007504 9.5e-44 180.3 114 71.9
FvH4_4g33550 Fragaria vesca HOM05D006178 ORTHO05D007504 1.6e-43 179.5 104 78.8
FAN12G1191 Fragaria x ananassa HOM05D006178 ORTHO05D007504 1.6e-43 179.5 104 78.8
DCAR_007330 Daucus carota HOM05D006178 ORTHO05D007504 2.1e-43 179.1 104 75.0
HPP92_013158 Vanilla planifolia HOM05D006178 ORTHO05D007504 2.1e-43 179.1 107 72.9
Atru.chr11.922 Acer truncatum HOM05D006178 ORTHO05D007504 3.6e-43 178.3 104 77.9
Cc11_g07280 Coffea canephora HOM05D006178 ORTHO05D007504 3.6e-43 178.3 106 75.5
Glyma.02G085100 Glycine max HOM05D006178 ORTHO05D007504 4.7e-43 177.9 106 75.5
FAN17G1905 Fragaria x ananassa HOM05D006178 ORTHO05D007504 6.2e-43 177.6 104 77.9
Ciclev10015964m.g Citrus clementina HOM05D006178 ORTHO05D007504 8.1e-43 177.2 104 76.9
COL.COLO4_16591 Corchorus olitorius HOM05D006178 ORTHO05D007504 8.1e-43 177.2 104 78.8
MELO3C016656.2 Cucumis melo HOM05D006178 ORTHO05D007504 8.1e-43 177.2 106 75.5
Medtr1g032430 Medicago truncatula HOM05D006178 ORTHO05D007504 8.1e-43 177.2 102 78.4
Oeu044010.1 Olea europaea HOM05D006178 ORTHO05D007504 1.8e-42 176.0 103 77.7
Psat6g046400 Pisum sativum HOM05D006178 ORTHO05D007504 2.3e-42 175.6 106 74.5
Potri.010G106400 Populus trichocarpa HOM05D006178 ORTHO05D007504 2.3e-42 175.6 102 77.5
TPR.G36937 Trifolium pratense HOM05D006178 ORTHO05D007504 2.3e-42 175.6 103 75.7
Lj2g0017740 Lotus japonicus HOM05D006178 ORTHO05D007504 3.1e-42 175.3 103 75.7
Lalb_Chr17g0338441 Lupinus albus HOM05D006178 ORTHO05D007504 3.1e-42 175.3 103 76.7
PGSC0003DMG400028747 Solanum tuberosum HOM05D006178 ORTHO05D007504 4.0e-42 174.9 103 73.8
Ca_12542_v3 Cicer arietinum L. HOM05D006178 ORTHO05D007504 5.2e-42 174.5 103 74.8
Manes.15G134200 Manihot esculenta HOM05D006178 ORTHO05D007504 5.2e-42 174.5 102 75.5
PSO017G4246 Papaver somniferum HOM05D006178 ORTHO05D007504 5.2e-42 174.5 105 75.2
Hund24927 Selenicereus undatus HOM05D006178 ORTHO05D007504 5.2e-42 174.5 107 75.7
EL10Ac2g02672 Beta vulgaris HOM05D006178 ORTHO05D007504 6.8e-42 174.1 104 73.1
Aqoxy3G00007 Aquilegia oxysepala HOM05D006178 ORTHO05D007504 8.9e-42 173.7 104 75.0
Peaxi162Scf00937g00336 Petunia axillaris HOM05D006178 ORTHO05D007504 8.9e-42 173.7 103 74.8
Ah.02g128010 Amaranthus hybridus HOM05D006178 ORTHO05D007504 2.0e-41 172.6 105 71.4
AUR62014248 Chenopodium quinoa HOM05D006178 ORTHO05D007504 2.0e-41 172.6 106 70.8
Solyc07g008850.3 Solanum lycopersicum HOM05D006178 ORTHO05D007504 2.0e-41 172.6 103 72.8
MBI13_g29562_MAGBIO Magnolia biondii HOM05D006178 ORTHO05D007504 3.4e-41 171.8 105 76.2
PSO478G4000 Papaver somniferum HOM05D006178 ORTHO05D007504 4.4e-41 171.4 105 74.3
BcaC01g01670 Brassica carinata HOM05D006178 ORTHO05D007504 5.8e-41 171.0 111 70.3
C03p73180 Brassica napus HOM05D006178 ORTHO05D007504 5.8e-41 171.0 111 70.3
BolC3t19616H Brassica oleracea HOM05D006178 ORTHO05D007504 5.8e-41 171.0 111 70.3
CAN.G511.14 Capsicum annuum HOM05D006178 ORTHO05D007504 5.8e-41 171.0 103 71.8
THA.LOC104821906 Tarenaya hassleriana HOM05D006178 ORTHO05D007504 5.8e-41 171.0 104 72.1
Cpa.g.sc2.193 Carica papaya HOM05D006178 ORTHO05D007504 7.5e-41 170.6 104 74.0
Thhalv10007963m.g Eutrema salsugineum HOM05D006178 ORTHO05D007504 7.5e-41 170.6 105 72.4
AT1G24793 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 9.8e-41 170.2 105 73.3
AT1G25054 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 9.8e-41 170.2 105 73.3
AT1G25145 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 9.8e-41 170.2 105 73.3
AT1G25210 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 9.8e-41 170.2 105 73.3
AL1G40190 Arabidopsis lyrata HOM05D006178 ORTHO05D007504 1.3e-40 169.9 105 71.4
Carub.0001s2539 Capsella rubella HOM05D006178 ORTHO05D007504 1.3e-40 169.9 105 71.4
AUR62038473 Chenopodium quinoa HOM05D006178 ORTHO05D007504 1.3e-40 169.9 104 71.2
Sc04g0008610 Simmondsia chinensis HOM05D006178 ORTHO05D007504 1.3e-40 169.9 103 75.7
Gohir.D01G139900 Gossypium hirsutum HOM05D006178 ORTHO05D007504 2.2e-40 169.1 104 75.0
Gorai.002G172000 Gossypium raimondii HOM05D006178 ORTHO05D007504 2.2e-40 169.1 104 75.0
A08p26780 Brassica napus HOM05D006178 ORTHO05D007504 3.7e-40 168.3 105 72.4
Gohir.A01G146700 Gossypium hirsutum HOM05D006178 ORTHO05D007504 3.7e-40 168.3 104 75.0
Sp1g23080 Schrenkiella parvula HOM05D006178 ORTHO05D007504 3.7e-40 168.3 105 71.4
Sopen07g004780 Solanum pennellii HOM05D006178 ORTHO05D007504 4.9e-40 167.9 107 71.0
SalBow2G2905 Salvia bowleyana HOM05D006178 ORTHO05D007504 1.1e-39 166.8 103 70.9
Migut.E00482 Erythranthe guttata HOM05D006178 ORTHO05D007504 3.2e-39 165.2 103 72.8
Zm00001eb009130 Zea mays HOM05D006178 ORTHO05D007504 4.1e-39 164.9 105 69.5
SGA_v2.0_scaffold23G10206 Striga asiatica HOM05D006178 ORTHO05D007504 7.1e-39 164.1 109 66.1
ATR0753G153 Amborella trichopoda HOM05D006178 ORTHO05D007504 9.2e-39 163.7 104 72.1
BcaB03g12042 Brassica carinata HOM05D006178 ORTHO05D007504 1.6e-38 162.9 105 70.5
Os03g0223900 Oryza sativa ssp. japonica HOM05D006178 ORTHO05D007504 6.0e-38 161.0 105 67.6
BraA08t34624Z Brassica rapa HOM05D006178 ORTHO05D007504 2.3e-37 159.1 102 69.6
ECA246G2474 Erigeron canadensis HOM05D006178 ORTHO05D007504 3.9e-37 158.3 107 69.2
TAR629G1361 Trochodendron aralioides HOM05D006178 ORTHO05D007504 3.9e-37 158.3 88 80.7
Sabra10G0077800 Salix brachista HOM05D006178 ORTHO05D007504 1.5e-36 156.4 134 58.2
HanXRQChr15g0476731 Helianthus annuus HOM05D006178 ORTHO05D007504 5.6e-36 154.5 104 66.3
QL03p035827 Quercus lobata HOM05D006178 ORTHO05D007504 2.8e-35 152.1 89 76.4
Aa31LG7G9330 Aethionema arabicum HOM05D006178 ORTHO05D007504 3.6e-35 151.8 128 57.8
Lsat_1_v5_gn_3_53481 Lactuca sativa HOM05D006178 ORTHO05D007504 3.1e-34 148.7 111 64.9
Phvul.003G019200 Phaseolus vulgaris HOM05D006178 ORTHO05D007504 5.2e-34 147.9 83 79.5
arahy.Tifrunner.gnm1.ann1.56CUD8 Arachis hypogaea HOM05D006178 ORTHO05D007504 6.8e-34 147.5 103 66.0
Pp3c3_1850 Physcomitrium patens HOM05D006178 ORTHO05D007504 6.8e-34 147.5 105 63.8
arahy.Tifrunner.gnm1.ann1.M99K8C Arachis hypogaea HOM05D006178 ORTHO05D007504 8.9e-34 147.1 103 66.0
HPP92_013128 Vanilla planifolia HOM05D006178 ORTHO05D007504 1.3e-32 143.3 89 71.9
Mapoly0012s0127 Marchantia polymorpha HOM05D006178 ORTHO05D007504 2.2e-32 142.5 105 60.0
SMO232G0119 Selaginella moellendorffii HOM05D006178 ORTHO05D007504 5.1e-29 131.3 104 55.8
CBR_g12524 Chara braunii HOM05D006178 ORTHO05D007504 8.6e-29 130.6 87 65.5
unitig_22.g5599 Utricularia gibba HOM05D000369 ORTHO05D000253 3.9e-21 105.1 103 53.4
PRCOL_00001866 Prasinoderma coloniale HOM05D006178 ORTHO05D007504 1.3e-19 100.1 115 51.3
Dinv07729 Davidia involucrata HOM05D006178 ORTHO05D007504 3.6e-19 98.6 55 83.6
Nn3g18365 Nelumbo nucifera HOM05D006178 ORTHO05D007504 6.2e-19 97.8 49 83.7
Haze_10879 Corylus avellana HOM05D006178 ORTHO05D007504 2.9e-16 89.0 55 69.1
MCO09G291 Micromonas commoda HOM05D006178 ORTHO05D007504 1.9e-15 86.3 102 41.2
Sed0025662 Sechium edule HOM05D006178 ORTHO05D007504 1.9e-15 86.3 58 65.5
Cre16.g653350 Chlamydomonas reinhardtii HOM05D006178 ORTHO05D007504 3.9e-13 78.6 106 37.7
CDE05G0668 Ceratophyllum demersum HOM05D006178 ORTHO05D007504 3.3e-12 75.5 56 66.1
CANSAT01G0234 Cannabis sativa HOM05D006178 ORTHO05D007504 3.6e-11 72.0 54 63.0
Sed0021590 Sechium edule HOM05D006178 ORTHO05D007504 8.4e-08 60.8 35 71.4
Ca_29306_v3 Cicer arietinum L. HOM05D001616 ORTHO05D007504 3.2e-07 58.9 92 41.3


User provided reference genes

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