Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 7.3e-156 555.1 413 100.0
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 2.3e-154 550.1 413 99.5
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 1.6e-123 447.6 407 88.7
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 2.3e-117 427.2 423 84.6
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 2.5e-116 423.7 417 84.2
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 3.4e-113 413.3 419 82.1
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 5.5e-111 406.0 426 79.8
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 3.5e-110 403.3 406 82.5
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 1.8e-109 401.0 406 82.3
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 1.1e-108 398.3 420 80.2
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 4.3e-108 396.4 407 82.3
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 5.7e-108 396.0 423 80.4
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 6.3e-107 392.5 425 79.3
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 2.6e-105 387.1 404 81.2
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 1.4e-103 381.3 419 80.2
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 2.7e-102 377.1 422 77.0
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 2.7e-102 377.1 419 78.0
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 2.7e-102 377.1 419 78.0
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 1.1e-98 365.2 414 78.3
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 2.4e-98 364.0 404 78.2
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 2.5e-95 354.0 415 76.1
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 3.2e-95 353.6 404 78.0
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 3.2e-95 353.6 404 76.7
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 7.9e-94 349.0 416 76.4
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 1.8e-93 347.8 414 75.4
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 1.5e-92 344.7 414 74.6
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 2.0e-92 344.4 415 75.2
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 5.7e-92 342.8 421 73.9
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 5.7e-92 342.8 425 73.9
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 9.7e-92 342.0 421 74.1
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 1.3e-91 341.7 412 73.8
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 1.7e-91 341.3 409 74.8
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 1.7e-91 341.3 411 74.9
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 2.8e-91 340.5 406 74.6
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 4.8e-91 339.7 411 73.7
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 8.2e-91 339.0 409 72.6
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 1.4e-90 338.2 402 75.9
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 7.0e-90 335.9 434 71.9
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 7.0e-90 335.9 407 74.0
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.5e-89 334.7 407 73.5
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 4.5e-89 333.2 434 71.4
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 7.7e-89 332.4 407 74.0
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 7.7e-89 332.4 418 74.9
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 1.0e-88 332.0 406 74.6
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 2.9e-88 330.5 418 72.2
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 3.8e-88 330.1 419 62.5
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 6.5e-88 329.3 407 73.2
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 8.5e-88 328.9 418 72.2
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 1.1e-87 328.6 413 75.3
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 2.5e-87 327.4 432 70.8
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 1.2e-86 325.1 444 66.7
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 2.1e-86 324.3 411 73.7
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 2.7e-86 323.9 413 74.6
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 2.3e-85 320.9 415 71.3
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 2.6e-84 317.4 410 72.9
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 2.6e-84 317.4 430 71.2
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 3.3e-84 317.0 405 73.3
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 5.7e-84 316.2 414 71.0
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 2.2e-83 314.3 403 73.7
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 2.2e-83 314.3 409 72.1
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 6.3e-83 312.8 423 70.7
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 1.1e-82 312.0 403 73.9
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 4.1e-82 310.1 403 73.4
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 4.1e-82 310.1 417 72.2
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 5.3e-82 309.7 403 72.2
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 7.0e-82 309.3 414 71.7
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 1.6e-81 308.1 403 73.4
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 1.6e-81 308.1 409 71.9
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 3.5e-81 307.0 403 73.2
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 3.5e-81 307.0 403 73.2
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 4.5e-81 306.6 189 83.1
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 1.3e-80 305.1 403 73.0
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 5.0e-80 303.1 427 67.9
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 9.4e-79 298.9 410 71.5
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 3.0e-77 293.9 394 70.6
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 6.8e-77 292.7 429 67.6
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.5e-76 291.6 502 51.6
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 5.7e-76 289.7 409 49.1
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 2.8e-75 287.3 401 69.1
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 6.3e-75 286.2 409 70.7
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 1.1e-74 285.4 410 68.8
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 1.8e-74 284.6 410 67.8
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 1.1e-71 275.4 403 70.2
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 1.9e-71 274.6 403 69.5
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 1.6e-70 271.6 403 69.0
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 2.0e-65 254.6 231 59.3
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 7.2e-63 246.1 232 56.0
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 6.1e-62 243.0 406 64.8
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 3.2e-58 230.7 415 47.0
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 5.8e-52 209.9 405 63.0
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 1.7e-43 181.8 269 81.4
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 2.5e-39 167.9 132 65.2
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 5.8e-36 156.8 233 43.3
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 2.2e-35 154.8 405 56.5
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 2.8e-30 137.9 71 93.0
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 1.3e-27 129.0 71 83.1
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.7e-27 128.6 71 83.1
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 4.2e-26 124.0 71 76.1
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 1.2e-25 122.5 71 83.1
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 2.7e-25 121.3 71 77.5
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.9e-23 115.2 68 73.5
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 5.6e-23 113.6 71 71.8
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 4.8e-22 110.5 71 71.8
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 2.2e-19 101.7 398 53.3
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 2.4e-10 71.6 36 80.6
Mapoly0026s0011 Marchantia polymorpha HOM05D006999 ORTHO05D008936 2.1e-06 58.5 121 30.6


User provided reference genes

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