Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 1.2e-144 516.5 263 100.0
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.0e-100 370.5 254 77.2
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 3.9e-100 368.6 254 77.6
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 7.4e-99 364.4 248 77.0
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 5.9e-96 354.8 262 71.0
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 5.9e-96 354.8 239 77.4
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 5.0e-95 351.7 244 75.8
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 8.5e-95 350.9 243 76.5
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 3.2e-94 349.0 244 75.4
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 4.2e-94 348.6 256 71.9
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 4.2e-94 348.6 243 74.5
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 9.4e-94 347.4 243 75.3
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 9.4e-94 347.4 243 74.9
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 9.4e-94 347.4 243 74.9
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 2.1e-93 346.3 240 76.2
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 3.6e-93 345.5 246 74.8
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 4.7e-93 345.1 240 75.0
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 7.9e-93 344.4 249 73.5
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 7.9e-93 344.4 242 74.4
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 1.0e-92 344.0 246 74.4
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 1.0e-92 344.0 247 72.9
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 1.8e-92 343.2 243 72.8
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 2.3e-92 342.8 243 72.8
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 3.0e-92 342.4 243 74.5
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 3.0e-92 342.4 244 73.4
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 3.9e-92 342.0 243 74.1
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 1.5e-91 340.1 249 72.7
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 2.0e-91 339.7 246 73.2
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.0e-91 339.7 243 72.4
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 2.6e-91 339.3 243 74.5
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 3.3e-91 339.0 251 71.3
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 4.4e-91 338.6 246 71.5
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 9.7e-91 337.4 250 68.8
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 1.3e-90 337.0 246 73.2
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 1.7e-90 336.7 243 73.7
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 1.7e-90 336.7 241 74.3
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 4.8e-90 335.1 249 69.9
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 6.3e-90 334.7 243 69.5
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 1.1e-89 334.0 244 71.3
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 1.4e-89 333.6 242 72.3
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 1.8e-89 333.2 240 71.7
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 2.4e-89 332.8 267 67.8
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 3.1e-89 332.4 252 69.4
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 4.1e-89 332.0 243 72.8
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 4.1e-89 332.0 257 68.5
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 1.6e-88 330.1 240 71.2
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 2.0e-88 329.7 265 67.2
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 3.5e-88 328.9 265 66.4
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 3.5e-88 328.9 240 72.5
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 5.9e-88 328.2 265 66.0
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 5.9e-88 328.2 244 69.3
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 1.0e-87 327.4 249 69.5
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 1.3e-87 327.0 243 72.0
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 5.0e-87 325.1 239 73.2
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 8.5e-87 324.3 240 71.7
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.1e-86 323.9 239 70.7
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 1.1e-86 323.9 239 72.4
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 1.1e-86 323.9 256 67.2
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.5e-86 323.6 240 71.2
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 2.5e-86 322.8 242 70.7
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 4.2e-86 322.0 240 71.2
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 7.2e-86 321.2 241 68.0
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 9.4e-86 320.9 239 69.0
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 8.0e-85 317.8 243 68.7
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 1.8e-84 316.6 246 68.7
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 5.2e-84 315.1 245 69.4
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 8.8e-84 314.3 243 68.3
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 1.5e-83 313.5 243 69.5
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 6.3e-82 308.1 227 72.7
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 1.4e-81 307.0 239 67.8
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.4e-81 307.0 239 66.1
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 1.8e-81 306.6 239 66.5
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 5.3e-81 305.1 239 67.4
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 9.1e-81 304.3 239 67.8
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 2.0e-80 303.1 239 67.8
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.0e-79 300.8 239 66.9
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 1.3e-79 300.4 239 66.1
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 1.3e-79 300.4 243 66.7
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 3.8e-79 298.9 239 66.5
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 3.8e-79 298.9 239 66.5
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 8.5e-79 297.7 239 67.4
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 1.5e-78 297.0 229 68.6
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 1.9e-78 296.6 239 66.1
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 4.2e-78 295.4 249 64.3
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 4.2e-78 295.4 239 65.7
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 4.2e-78 295.4 248 64.1
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 4.2e-78 295.4 239 65.7
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 3.6e-77 292.4 240 65.8
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 6.1e-77 291.6 240 65.8
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 5.2e-76 288.5 216 71.8
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 8.8e-76 287.7 255 65.5
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 6.3e-74 281.6 216 69.4
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 4.1e-73 278.9 239 60.3
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 5.9e-72 275.0 239 58.2
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 1.8e-68 263.5 202 69.8
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 1.2e-67 260.8 239 61.1
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 4.4e-67 258.8 201 70.1
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 5.7e-67 258.5 240 62.5
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 3.7e-66 255.8 215 65.6
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 9.2e-65 251.1 177 74.6
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 2.7e-64 249.6 237 57.4
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 7.8e-64 248.1 247 52.2
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 1.3e-63 247.3 271 54.6
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 3.3e-62 242.7 185 71.9
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 4.3e-62 242.3 185 71.4
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 4.7e-61 238.8 186 71.0
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 8.0e-61 238.0 238 51.7
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 8.3e-58 228.0 178 70.8
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 2.0e-56 223.4 239 54.0
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 7.8e-56 221.5 217 58.5
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 1.3e-50 204.1 240 48.3
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 1.9e-46 190.3 244 48.8
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 4.3e-38 162.5 290 37.2
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 4.4e-35 152.5 89 79.8
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 1.1e-30 137.9 130 60.8
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 9.9e-27 124.8 104 61.5
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 4.2e-25 119.4 85 67.1
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 2.1e-24 117.1 94 64.9
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 8.1e-21 105.1 104 52.9
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 7.9e-16 88.6 112 46.4
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.8e-12 77.4 68 64.7
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 9.0e-12 75.1 44 77.3
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 8.4e-10 68.6 45 73.3


User provided reference genes

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