Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003995 Camellia sinensis var. sinensis HOM05D007125 ORTHO05D008766 0.0e+00 1600.5 824 100.0
Actinidia29131 Actinidia chinensis HOM05D007125 ORTHO05D008766 1.4e-276 956.4 826 64.5
Dinv35513 Davidia involucrata HOM05D007125 ORTHO05D008766 1.6e-253 879.8 834 59.1
TAR623G0133 Trochodendron aralioides HOM05D007125 ORTHO05D008766 1.2e-195 687.6 834 49.9
Haze_20950 Corylus avellana HOM05D007125 ORTHO05D008766 3.6e-184 649.4 819 48.5
Lj2A79T37 Lonicera japonica HOM05D007125 ORTHO05D008766 1.2e-182 644.4 826 46.9
Potri.006G096400 Populus trichocarpa HOM05D007125 ORTHO05D008766 3.8e-173 612.8 835 44.9
CiPaw.09G206100 Carya illinoinensis HOM05D007125 ORTHO05D008766 7.8e-171 605.1 838 45.6
Atru.chr8.2198 Acer truncatum HOM05D007125 ORTHO05D008766 1.4e-167 594.3 805 44.0
Oeu044362.1 Olea europaea HOM05D007125 ORTHO05D008766 1.2e-166 591.3 836 44.6
Sabra06G0074100 Salix brachista HOM05D007125 ORTHO05D008766 6.6e-162 575.5 838 42.6
Duzib093G0828 Durio zibethinus HOM05D007125 ORTHO05D008766 1.2e-158 564.7 831 43.8
Manes.08G087700 Manihot esculenta HOM05D007125 ORTHO05D008766 3.4e-158 563.1 828 43.0
vmacro20236 Vaccinium macrocarpon HOM05D007125 ORTHO05D008766 9.9e-158 561.6 415 68.4
TWI77G0961 Tripterygium wilfordii HOM05D007125 ORTHO05D008766 6.4e-157 558.9 831 42.4
GSVIVG01034011001 Vitis vinifera HOM05D007125 ORTHO05D008766 1.6e-155 554.3 525 58.1
Thecc.05G022200 Theobroma cacao HOM05D007125 ORTHO05D008766 6.7e-154 548.9 825 42.5
Hma1.2p1_0763F.1_g214640 Hydrangea macrophylla HOM05D007125 ORTHO05D008766 1.1e-153 548.1 620 50.5
DCAR_024035 Daucus carota HOM05D007125 ORTHO05D008766 4.5e-150 536.2 824 43.3
Gohir.A09G163400 Gossypium hirsutum HOM05D007125 ORTHO05D008766 9.3e-148 528.5 817 41.6
Gohir.D09G158900 Gossypium hirsutum HOM05D007125 ORTHO05D008766 2.1e-147 527.3 823 41.4
Gorai.006G180600 Gossypium raimondii HOM05D007125 ORTHO05D008766 3.5e-147 526.6 823 41.6
COL.COLO4_14596 Corchorus olitorius HOM05D007125 ORTHO05D008766 2.5e-145 520.4 828 42.1
Aqoxy1G00714 Aquilegia oxysepala HOM05D007125 ORTHO05D008766 5.8e-142 509.2 840 39.5
CANSAT35G1716 Cannabis sativa HOM05D007125 ORTHO05D008766 7.6e-142 508.8 817 40.5
PSO384G0252 Papaver somniferum HOM05D007125 ORTHO05D008766 4.6e-139 499.6 858 38.5
Lalb_Chr03g0042991 Lupinus albus HOM05D007125 ORTHO05D008766 6.0e-139 499.2 816 41.4
Nn2g11366 Nelumbo nucifera HOM05D007125 ORTHO05D008766 7.9e-139 498.8 810 41.2
Ca_09172_v3 Cicer arietinum L. HOM05D007125 ORTHO05D008766 8.7e-138 495.4 809 41.3
Glyma.07G144800 Glycine max HOM05D007125 ORTHO05D008766 2.0e-134 484.2 809 39.7
arahy.Tifrunner.gnm1.ann1.8EY2MC Arachis hypogaea HOM05D007125 ORTHO05D008766 1.0e-133 481.9 801 40.6
Ciclev10013588m.g Citrus clementina HOM05D007125 ORTHO05D008766 2.2e-133 480.7 487 53.8
CsaV3_4G025990 Cucumis sativus L. HOM05D007125 ORTHO05D008766 2.2e-133 480.7 831 40.2
Lj1g0008640 Lotus japonicus HOM05D007125 ORTHO05D008766 6.5e-133 479.2 819 40.4
Phvul.008G107900 Phaseolus vulgaris HOM05D007125 ORTHO05D008766 9.4e-132 475.3 807 39.5
VMungo1383G2599 Vigna mungo HOM05D007125 ORTHO05D008766 1.4e-130 471.5 806 40.0
arahy.Tifrunner.gnm1.ann1.A1GI61 Arachis hypogaea HOM05D007125 ORTHO05D008766 5.7e-129 466.1 866 38.0
PGR031G2086 Punica granatum HOM05D007125 ORTHO05D008766 6.9e-127 459.1 804 39.1
Cpa.g.sc56.115 Carica papaya HOM05D007125 ORTHO05D008766 4.5e-126 456.4 406 57.9
ClCG04G007250 Citrullus lanatus HOM05D007125 ORTHO05D008766 6.1e-123 446.0 801 39.1
Sed0001650 Sechium edule HOM05D007125 ORTHO05D008766 1.4e-122 444.9 671 41.6
MSTRG.19028 Avicennia marina HOM05D007125 ORTHO05D008766 1.2e-118 431.8 677 40.5
MBI05_g03452_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 1.2e-118 431.8 384 57.0
Migut.J00225 Erythranthe guttata HOM05D007125 ORTHO05D008766 1.9e-116 424.5 805 36.9
SalBow5G1282 Salvia bowleyana HOM05D007125 ORTHO05D008766 3.2e-116 423.7 793 37.1
THA.LOC104823281 Tarenaya hassleriana HOM05D007125 ORTHO05D008766 5.2e-106 389.8 803 34.6
Nitab4.5_0000008g0740 Nicotiana tabacum HOM05D007125 ORTHO05D008766 5.7e-105 386.3 410 50.7
ATR0618G048 Amborella trichopoda HOM05D007125 ORTHO05D008766 8.3e-104 382.5 689 37.9
PGSC0003DMG400020348 Solanum tuberosum HOM05D007125 ORTHO05D008766 3.1e-103 380.6 418 50.5
Nitab4.5_0009193g0010 Nicotiana tabacum HOM05D007125 ORTHO05D008766 4.1e-103 380.2 424 49.5
CARHR083450 Cardamine hirsuta HOM05D007125 ORTHO05D008766 1.3e-101 375.2 477 46.8
Sopen09g007020 Solanum pennellii HOM05D007125 ORTHO05D008766 2.5e-100 370.9 419 48.9
Solyc09g013160.3 Solanum lycopersicum HOM05D007125 ORTHO05D008766 5.5e-100 369.8 418 49.8
Lsat_1_v5_gn_8_99881 Lactuca sativa HOM05D007125 ORTHO05D008766 8.8e-98 362.5 548 40.5
BraA01t04316Z Brassica rapa HOM05D007125 ORTHO05D008766 3.4e-97 360.5 498 44.6
BcaC09g48007 Brassica carinata HOM05D007125 ORTHO05D008766 9.8e-97 359.0 544 42.3
AL3G20150 Arabidopsis lyrata HOM05D007125 ORTHO05D008766 1.4e-95 355.1 475 44.8
Psat3g131480 Pisum sativum HOM05D007125 ORTHO05D008766 2.7e-94 350.9 796 34.9
Sp3g07530 Schrenkiella parvula HOM05D007125 ORTHO05D008766 2.3e-93 347.8 652 38.0
Aa31LG3G1610 Aethionema arabicum HOM05D007125 ORTHO05D008766 1.1e-92 345.5 487 42.9
BolC1t05475H Brassica oleracea HOM05D007125 ORTHO05D008766 2.5e-92 344.4 642 39.1
Carub.0003s0824 Capsella rubella HOM05D007125 ORTHO05D008766 5.5e-92 343.2 621 38.3
MELO3C003224.2 Cucumis melo HOM05D007125 ORTHO05D008766 3.6e-91 340.5 751 36.0
Thhalv10022253m.g Eutrema salsugineum HOM05D007125 ORTHO05D008766 2.4e-87 327.8 483 42.4
ECA236G2625 Erigeron canadensis HOM05D007125 ORTHO05D008766 3.2e-87 327.4 813 33.9
CDE04G1007 Ceratophyllum demersum HOM05D007125 ORTHO05D008766 1.3e-85 322.0 813 32.5
AT3G09080 Arabidopsis thaliana HOM05D007125 ORTHO05D008766 4.3e-84 317.0 475 42.7
TPR.G1550 Trifolium pratense HOM05D007125 ORTHO05D008766 1.2e-81 308.9 279 57.0
HanXRQChr04g0102011 Helianthus annuus HOM05D007125 ORTHO05D008766 2.8e-75 287.7 630 36.2
Mapoly0113s0048 Marchantia polymorpha HOM05D007125 ORTHO05D008766 4.4e-73 280.4 450 37.8
Pp3c9_8840 Physcomitrium patens HOM05D007125 ORTHO05D008766 2.1e-70 271.6 376 39.4
Medtr7g066750 Medicago truncatula HOM05D007125 ORTHO05D008766 3.5e-70 270.8 634 33.3
SMO358G0023 Selaginella moellendorffii HOM05D007125 ORTHO05D008766 8.6e-69 266.2 479 35.3
Pp3c3_16960 Physcomitrium patens HOM05D007125 ORTHO05D008766 3.9e-61 240.7 299 43.1
AagrBONN_evm.TU.Sc2ySwM_228.1352 Anthoceros agrestis HOM05D007125 ORTHO05D008766 5.1e-61 240.4 344 41.0
HanXRQChr04g0102021 Helianthus annuus HOM05D007125 ORTHO05D008766 4.4e-57 227.3 211 54.5
Sc01g0006790 Simmondsia chinensis HOM05D007125 ORTHO05D008766 7.6e-57 226.5 591 33.7
unitig_27.g24821 Utricularia gibba HOM05D007125 ORTHO05D008766 3.1e-42 177.9 194 47.4
Cre01.g034600 Chlamydomonas reinhardtii HOM05D007125 ORTHO05D008766 3.3e-36 157.9 270 32.2
Sc01g0006780 Simmondsia chinensis HOM05D007125 ORTHO05D008766 1.8e-34 152.1 114 63.2
Actinidia13779 Actinidia chinensis HOM05D007125 ORTHO05D008766 7.9e-30 136.7 243 44.0
Hma1.2p1_0763F.1_g214650 Hydrangea macrophylla HOM05D007125 ORTHO05D008766 1.1e-28 132.9 188 43.6
arahy.Tifrunner.gnm1.ann1.IUS8SN Arachis hypogaea HOM05D007125 ORTHO05D008766 3.2e-23 114.8 82 65.9
arahy.Tifrunner.gnm1.ann1.KE62B1 Arachis hypogaea HOM05D007125 ORTHO05D008766 5.5e-23 114.0 82 65.9
arahy.Tifrunner.gnm1.ann1.KIE2XR Arachis hypogaea HOM05D007125 ORTHO05D008766 6.1e-22 110.5 82 64.6
MBI05_g03454_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 1.7e-16 92.4 260 30.8
TPR.G40809 Trifolium pratense HOM05D007125 ORTHO05D008766 2.2e-16 92.0 380 27.9
Sc01g0006770 Simmondsia chinensis HOM05D007125 ORTHO05D008766 6.5e-16 90.5 66 57.6
Eucgr.B02785 Eucalyptus grandis HOM05D007125 ORTHO05D008766 1.0e-13 83.2 361 27.7
TPR.G1592 Trifolium pratense HOM05D007125 ORTHO05D008766 1.1e-12 79.7 112 39.3
MCO04G462 Micromonas commoda HOM05D015011 ORTHO05D017325 5.3e-10 70.9 223 22.4
BcaC09g47967 Brassica carinata HOM05D007125 ORTHO05D008766 1.0e-08 66.6 55 58.2
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 2.2e-08 65.5 238 28.2
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 2.9e-08 65.1 238 28.2
Migut.D00245 Erythranthe guttata HOM05D002999 ORTHO05D003137 1.9e-07 62.4 260 23.8
AagrBONN_evm.TU.Sc2ySwM_228.3731 Anthoceros agrestis HOM05D002999 ORTHO05D003137 4.2e-07 61.2 270 23.0
Actinidia20838 Actinidia chinensis HOM05D003335 ORTHO05D003853 1.6e-06 59.3 219 22.4
Cfa025266 Carpinus fangiana HOM05D007125 ORTHO05D008766 2.1e-06 58.9 236 22.5
vmacro15476 Vaccinium macrocarpon HOM05D003335 ORTHO05D003853 2.1e-06 58.9 219 22.8
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 3.6e-06 58.2 221 26.7


User provided reference genes

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