Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003549 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D003997 5.1e-82 308.1 212 100.0
CSS0029369 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D003997 6.5e-69 264.6 210 72.4
Dinv04410 Davidia involucrata HOM05D000222 ORTHO05D003997 4.3e-57 225.3 210 61.9
Rhsim13G0143100 Rhododendron simsii HOM05D000222 ORTHO05D003997 1.6e-56 223.4 211 62.1
vmacro03628 Vaccinium macrocarpon HOM05D000222 ORTHO05D003997 1.4e-55 220.3 211 61.6
Rhsim02G0091500 Rhododendron simsii HOM05D000222 ORTHO05D003997 2.9e-53 212.6 212 60.4
Hma1.2p1_0657F.1_g196950 Hydrangea macrophylla HOM05D000222 ORTHO05D003997 3.2e-52 209.1 198 62.1
DCAR_030857 Daucus carota HOM05D000222 ORTHO05D003997 9.4e-52 207.6 210 59.0
TAR624G0367 Trochodendron aralioides HOM05D000222 ORTHO05D003997 2.1e-51 206.5 210 55.7
TAR626G0385 Trochodendron aralioides HOM05D000222 ORTHO05D003997 2.7e-51 206.1 208 56.7
TAR629G0719 Trochodendron aralioides HOM05D000222 ORTHO05D003997 7.9e-51 204.5 210 55.2
vmacro15741 Vaccinium macrocarpon HOM05D000222 ORTHO05D003997 1.4e-50 203.8 212 58.5
Nn1g07460 Nelumbo nucifera HOM05D000222 ORTHO05D003997 1.5e-49 200.3 209 54.5
Nn1g03230 Nelumbo nucifera HOM05D000222 ORTHO05D003997 2.2e-48 196.4 210 56.2
Lj2A259T35 Lonicera japonica HOM05D000222 ORTHO05D003997 1.8e-47 193.4 217 55.8
Oeu030106.1 Olea europaea HOM05D000222 ORTHO05D003997 6.9e-47 191.4 208 55.8
Oeu057039.1 Olea europaea HOM05D000222 ORTHO05D003997 2.6e-46 189.5 197 57.4
MBI19_g25587_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D003997 5.9e-46 188.3 211 52.6
MBI16_g26374_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D003997 2.9e-45 186.0 204 53.9
DCAR_002231 Daucus carota HOM05D000222 ORTHO05D003997 1.2e-43 180.6 190 58.9
HanXRQChr01g0004781 Helianthus annuus HOM05D000222 ORTHO05D003997 4.7e-43 178.7 209 53.1
ECA248G0145 Erigeron canadensis HOM05D000222 ORTHO05D003997 3.0e-42 176.0 211 53.1
Peaxi162Scf00576g00210 Petunia axillaris HOM05D000222 ORTHO05D003997 6.7e-42 174.9 188 56.4
Dinv21274 Davidia involucrata HOM05D000222 ORTHO05D003997 8.8e-42 174.5 191 53.9
Migut.H01619 Erythranthe guttata HOM05D000222 ORTHO05D003997 1.1e-41 174.1 209 53.1
Aqoxy4G02226 Aquilegia oxysepala HOM05D000222 ORTHO05D003997 1.5e-41 173.7 197 52.3
Nitab4.5_0002478g0010 Nicotiana tabacum HOM05D000222 ORTHO05D003997 2.6e-41 172.9 188 56.4
Nitab4.5_0008857g0010 Nicotiana tabacum HOM05D000222 ORTHO05D003997 3.3e-41 172.6 187 56.7
CiPaw.03G278700 Carya illinoinensis HOM05D000222 ORTHO05D003997 2.2e-40 169.9 210 51.9
Lj1A1243G52 Lonicera japonica HOM05D000222 ORTHO05D003997 2.2e-40 169.9 189 56.1
CiPaw.04G196200 Carya illinoinensis HOM05D000222 ORTHO05D003997 3.7e-40 169.1 203 51.7
QL08p028660 Quercus lobata HOM05D000222 ORTHO05D003997 6.3e-40 168.3 203 70.9
Migut.M01425 Erythranthe guttata HOM05D000222 ORTHO05D003997 8.2e-40 167.9 184 56.0
Potri.002G221500 Populus trichocarpa HOM05D000222 ORTHO05D003997 1.8e-39 166.8 210 51.4
Haze_12689 Corylus avellana HOM05D000222 ORTHO05D003997 2.4e-39 166.4 210 67.1
Cfa014242 Carpinus fangiana HOM05D000222 ORTHO05D003997 3.1e-39 166.0 210 66.7
Duzib138G0220 Durio zibethinus HOM05D000222 ORTHO05D003997 3.1e-39 166.0 210 64.3
Cpa.g.sc136.23 Carica papaya HOM05D000222 ORTHO05D003997 4.1e-39 165.6 204 50.5
Duzib211G0478 Durio zibethinus HOM05D000222 ORTHO05D003997 4.1e-39 165.6 210 49.0
Prupe.3G201500 Prunus persica HOM05D000222 ORTHO05D003997 1.2e-38 164.1 205 51.7
Thecc.01G190800 Theobroma cacao HOM05D000222 ORTHO05D003997 2.0e-38 163.3 210 65.7
Cc09_g00630 Coffea canephora HOM05D000222 ORTHO05D003997 2.6e-38 162.9 188 55.9
Potri.014G164800 Populus trichocarpa HOM05D000222 ORTHO05D003997 3.5e-38 162.5 210 50.5
Dinv05353 Davidia involucrata HOM05D000222 ORTHO05D000329 4.5e-38 162.2 202 50.5
Gohir.A07G190500 Gossypium hirsutum HOM05D000222 ORTHO05D003997 4.5e-38 162.2 210 54.3
FvH4_6g41110 Fragaria vesca HOM05D000222 ORTHO05D003997 5.9e-38 161.8 203 72.4
FAN05G0073 Fragaria x ananassa HOM05D000222 ORTHO05D003997 5.9e-38 161.8 203 72.4
FAN09G0595 Fragaria x ananassa HOM05D000222 ORTHO05D003997 7.7e-38 161.4 203 72.9
Gohir.D07G196800 Gossypium hirsutum HOM05D000222 ORTHO05D003997 7.7e-38 161.4 210 53.3
Sabra14G0125500 Salix brachista HOM05D000222 ORTHO05D003997 7.7e-38 161.4 210 50.0
TWI18G0788 Tripterygium wilfordii HOM05D000222 ORTHO05D003997 7.7e-38 161.4 210 49.5
Gorai.001G220500 Gossypium raimondii HOM05D000222 ORTHO05D003997 1.0e-37 161.0 210 53.3
TWI36G1024 Tripterygium wilfordii HOM05D000222 ORTHO05D003997 1.3e-37 160.6 210 49.5
PGR042G0083 Punica granatum HOM05D000222 ORTHO05D003997 1.7e-37 160.2 199 51.3
FAN14G3541 Fragaria x ananassa HOM05D000222 ORTHO05D003997 2.2e-37 159.8 203 72.4
Glyma.20G059100 Glycine max HOM05D000222 ORTHO05D003997 5.0e-37 158.7 210 49.5
Gohir.A07G087900 Gossypium hirsutum HOM05D000222 ORTHO05D003997 6.5e-37 158.3 210 53.3
Manes.13G063900 Manihot esculenta HOM05D000222 ORTHO05D003997 6.5e-37 158.3 210 51.0
CARHR184180 Cardamine hirsuta HOM05D000222 ORTHO05D003997 1.1e-36 157.5 211 46.9
Sabra02G0169300 Salix brachista HOM05D000222 ORTHO05D003997 1.5e-36 157.1 210 49.0
Gorai.001G099400 Gossypium raimondii HOM05D000222 ORTHO05D003997 3.2e-36 156.0 210 51.9
Manes.12G061500 Manihot esculenta HOM05D000222 ORTHO05D003997 3.2e-36 156.0 210 51.0
Thhalv10003897m.g Eutrema salsugineum HOM05D000222 ORTHO05D003997 4.2e-36 155.6 211 46.4
Glyma.13G025900 Glycine max HOM05D000222 ORTHO05D003997 4.2e-36 155.6 210 48.6
Gohir.D07G092800 Gossypium hirsutum HOM05D000222 ORTHO05D003997 5.5e-36 155.2 210 50.5
COL.COLO4_08497 Corchorus olitorius HOM05D000222 ORTHO05D003997 7.2e-36 154.8 207 65.7
PSO541G2057 Papaver somniferum HOM05D000222 ORTHO05D003997 2.1e-35 153.3 187 51.3
PSO675G9062 Papaver somniferum HOM05D000222 ORTHO05D003997 2.1e-35 153.3 187 51.3
LjContig00081g0010659 Lotus japonicus HOM05D000222 ORTHO05D003997 2.7e-35 152.9 203 68.0
Lalb_Chr10g0107621 Lupinus albus HOM05D000222 ORTHO05D003997 3.6e-35 152.5 203 65.0
PGSC0003DMG400008456 Solanum tuberosum HOM05D000222 ORTHO05D003997 4.7e-35 152.1 184 52.2
AL8G20820 Arabidopsis lyrata HOM05D000222 ORTHO05D003997 6.1e-35 151.8 211 51.7
MSTRG.13112 Avicennia marina HOM05D000222 ORTHO05D003997 8.0e-35 151.4 188 53.2
VMungo0540G0259 Vigna mungo HOM05D000222 ORTHO05D003997 8.0e-35 151.4 198 49.5
AT5G48160 Arabidopsis thaliana HOM05D000222 ORTHO05D003997 1.0e-34 151.0 211 58.8
MSTRG.7148 Avicennia marina HOM05D000222 ORTHO05D003997 1.0e-34 151.0 188 51.6
Lalb_Chr04g0247271 Lupinus albus HOM05D000222 ORTHO05D003997 1.0e-34 151.0 210 57.6
Ca_06458_v3 Cicer arietinum L. HOM05D000222 ORTHO05D003997 1.4e-34 150.6 210 62.4
SGA_v2.0_scaffold7G03719 Striga asiatica HOM05D000222 ORTHO05D003997 1.4e-34 150.6 194 47.9
Phvul.006G012000 Phaseolus vulgaris HOM05D000222 ORTHO05D003997 4.0e-34 149.1 201 49.3
Glyma.14G007300 Glycine max HOM05D000222 ORTHO05D003997 5.2e-34 148.7 210 62.4
Sopen05g032660 Solanum pennellii HOM05D000222 ORTHO05D003997 5.2e-34 148.7 184 51.6
Eucgr.A01043 Eucalyptus grandis HOM05D000222 ORTHO05D003997 8.8e-34 147.9 203 47.3
Sp2g18560 Schrenkiella parvula HOM05D000222 ORTHO05D003997 8.8e-34 147.9 211 45.0
CDE10G0307 Ceratophyllum demersum HOM05D000222 ORTHO05D003997 1.1e-33 147.5 210 44.8
Lsat_1_v5_gn_0_32421 Lactuca sativa HOM05D000222 ORTHO05D003997 1.5e-33 147.1 216 45.8
Medtr5g097360 Medicago truncatula HOM05D000222 ORTHO05D003997 1.5e-33 147.1 210 63.3
Solyc05g054180.3 Solanum lycopersicum HOM05D000222 ORTHO05D003997 2.0e-33 146.7 184 50.5
TWI75G1713 Tripterygium wilfordii HOM05D000222 ORTHO05D003997 2.0e-33 146.7 210 45.7
Glyma.02G305700 Glycine max HOM05D000222 ORTHO05D003997 4.4e-33 145.6 210 61.0
MD17G1113100 Malus domestica HOM05D000222 ORTHO05D003997 5.7e-33 145.2 188 54.3
BcaB04g19554 Brassica carinata HOM05D000222 ORTHO05D003997 9.7e-33 144.4 211 45.0
Lj6g0017172 Lotus japonicus HOM05D000222 ORTHO05D003997 9.7e-33 144.4 215 45.1
MD09G1122100 Malus domestica HOM05D000222 ORTHO05D003997 9.7e-33 144.4 188 68.6
Zm00001eb115250 Zea mays HOM05D000222 ORTHO05D003997 1.3e-32 144.1 211 51.7
TPR.G1263 Trifolium pratense HOM05D000222 ORTHO05D003997 2.8e-32 142.9 210 65.2
Zm00001eb248700 Zea mays HOM05D000222 ORTHO05D003997 3.7e-32 142.5 202 58.9
THA.LOC104819039 Tarenaya hassleriana HOM05D000222 ORTHO05D003997 4.8e-32 142.1 203 63.5
DCAR_019236 Daucus carota HOM05D000222 ORTHO05D003997 6.3e-32 141.7 201 44.8
Os12g0514400 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D003997 8.2e-32 141.4 198 44.9
Sc21g0000720 Simmondsia chinensis HOM05D000222 ORTHO05D003997 4.1e-31 139.0 201 44.8
A09p04330 Brassica napus HOM05D000222 ORTHO05D003997 7.0e-31 138.3 212 43.9
unitig_748.g7914 Utricularia gibba HOM05D000222 ORTHO05D003997 4.5e-30 135.6 190 45.8
SHI10138 Sapria himalayana HOM05D000222 ORTHO05D003997 7.7e-30 134.8 211 44.1
Hund12532 Selenicereus undatus HOM05D000222 ORTHO05D003997 1.0e-29 134.4 204 42.6
EL10Ac9g22704 Beta vulgaris HOM05D000222 ORTHO05D003997 1.7e-29 133.7 204 43.1
MELO3C024207.2 Cucumis melo HOM05D000222 ORTHO05D003997 1.7e-29 133.7 188 66.0
CsaV3_7G002650 Cucumis sativus L. HOM05D000222 ORTHO05D003997 1.7e-29 133.7 188 51.6
Sed0005998 Sechium edule HOM05D000222 ORTHO05D003997 2.2e-29 133.3 187 66.3
GSVIVG01030057001 Vitis vinifera HOM05D000222 ORTHO05D003997 2.2e-29 133.3 199 45.7
unitig_32.g11054 Utricularia gibba HOM05D000222 ORTHO05D003997 2.9e-29 132.9 190 46.8
ClCG02G002720 Citrullus lanatus HOM05D000222 ORTHO05D003997 8.5e-29 131.3 185 63.8
Ciclev10014794m.g Citrus clementina HOM05D000222 ORTHO05D003997 2.5e-28 129.8 170 50.6
VMungo0647G0556 Vigna mungo HOM05D000222 ORTHO05D003997 2.5e-28 129.8 212 62.3
Carub.0002s0065 Capsella rubella HOM05D000222 ORTHO05D003997 3.2e-28 129.4 207 49.3
CAN.G449.25 Capsicum annuum HOM05D000222 ORTHO05D003997 3.2e-28 129.4 189 45.0
THA.LOC104826656 Tarenaya hassleriana HOM05D000222 ORTHO05D003997 3.2e-28 129.4 203 41.9
RcHm_v2.0_Chr2g0156671 Rosa chinensis HOM05D000222 ORTHO05D003997 4.2e-28 129.0 203 66.0
Hund11440 Selenicereus undatus HOM05D000222 ORTHO05D003997 9.4e-28 127.9 204 42.6
AUR62029084 Chenopodium quinoa HOM05D000222 ORTHO05D003997 1.2e-27 127.5 204 41.7
AUR62015028 Chenopodium quinoa HOM05D000222 ORTHO05D003997 2.1e-27 126.7 200 42.0
CsaV3_7G023700 Cucumis sativus L. HOM05D000222 ORTHO05D003997 2.1e-27 126.7 187 58.3
HanXRQChr16g0516801 Helianthus annuus HOM05D000222 ORTHO05D003997 2.1e-27 126.7 177 48.0
Phvul.008G285600 Phaseolus vulgaris HOM05D000222 ORTHO05D003997 3.6e-27 125.9 205 62.4
C09p04640 Brassica napus HOM05D000222 ORTHO05D003997 2.3e-26 123.2 213 40.4
Atru.chr6.3358 Acer truncatum HOM05D000222 ORTHO05D003997 5.2e-26 122.1 169 71.0
BcaC09g47946 Brassica carinata HOM05D000222 ORTHO05D003997 6.8e-26 121.7 211 55.9
BolC1t05533H Brassica oleracea HOM05D000222 ORTHO05D003997 6.8e-26 121.7 211 55.9
HPP92_021282 Vanilla planifolia HOM05D000222 ORTHO05D003997 6.8e-26 121.7 178 66.3
CSS0026317 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D003997 1.2e-25 120.9 163 49.1
CDE10G0248 Ceratophyllum demersum HOM05D000222 ORTHO05D003997 1.2e-25 120.9 197 50.3
MELO3C024108.2 Cucumis melo HOM05D000222 ORTHO05D003997 1.2e-25 120.9 188 46.8
Ah.01g013870 Amaranthus hybridus HOM05D000222 ORTHO05D003997 1.5e-25 120.6 190 42.6
BraA01t04363Z Brassica rapa HOM05D000222 ORTHO05D003997 2.0e-25 120.2 211 55.9
CAN.G1397.1 Capsicum annuum HOM05D000222 ORTHO05D003997 3.4e-25 119.4 189 43.9
Peaxi162Scf00776g00115 Petunia axillaris HOM05D000222 ORTHO05D003997 4.4e-25 119.0 188 41.0
Nitab4.5_0001774g0010 Nicotiana tabacum HOM05D000222 ORTHO05D003997 9.8e-25 117.9 189 42.9
PGSC0003DMG400006146 Solanum tuberosum HOM05D000222 ORTHO05D003997 2.2e-24 116.7 189 44.4
Aa31LG5G18350 Aethionema arabicum HOM05D000222 ORTHO05D003997 2.8e-24 116.3 211 57.3
Solyc07g047780.3 Solanum lycopersicum HOM05D000222 ORTHO05D003997 4.8e-24 115.5 189 42.3
Nitab4.5_0010353g0020 Nicotiana tabacum HOM05D000222 ORTHO05D003997 8.3e-24 114.8 189 57.7
Actinidia02297 Actinidia chinensis HOM05D000222 ORTHO05D003997 1.4e-23 114.0 67 89.6
Sopen07g024220 Solanum pennellii HOM05D000222 ORTHO05D003997 1.4e-23 114.0 189 43.4
Hma1.2p1_1267F.1_g271520 Hydrangea macrophylla HOM05D000222 ORTHO05D003997 5.4e-23 112.1 161 48.4
Nitab4.5_0001741g0010 Nicotiana tabacum HOM05D000222 ORTHO05D003997 1.2e-22 110.9 188 39.9
Carub.0003s0736 Capsella rubella HOM05D000222 ORTHO05D003997 1.6e-22 110.5 193 60.1
ClCG02G009370 Citrullus lanatus HOM05D000222 ORTHO05D003997 2.0e-22 110.2 172 67.4
MELO3C025977.2 Cucumis melo HOM05D000222 ORTHO05D003997 2.0e-22 110.2 172 66.9
Thhalv10020400m.g Eutrema salsugineum HOM05D000222 ORTHO05D003997 3.5e-22 109.4 193 58.5
CsaV3_6G009470 Cucumis sativus L. HOM05D000222 ORTHO05D003997 4.5e-22 109.0 172 66.3
Hma1.2p1_2614F.1_g325420 Hydrangea macrophylla HOM05D000222 ORTHO05D003997 4.5e-22 109.0 161 47.2
AL3G19150 Arabidopsis lyrata HOM05D000222 ORTHO05D003997 5.9e-22 108.6 202 56.4
AT3G07780 Arabidopsis thaliana HOM05D000222 ORTHO05D003997 7.7e-22 108.2 193 59.1
CARHR082490 Cardamine hirsuta HOM05D000222 ORTHO05D003997 2.2e-21 106.7 210 53.8
CDE10G0723 Ceratophyllum demersum HOM05D000222 ORTHO05D003997 5.0e-21 105.5 166 50.0
Sed0000297 Sechium edule HOM05D000222 ORTHO05D003997 8.5e-21 104.8 172 64.0
CANSAT64G1315 Cannabis sativa HOM05D000222 ORTHO05D003997 4.2e-20 102.4 203 56.2
PGSC0003DMG400018835 Solanum tuberosum HOM05D000222 ORTHO05D017589 2.7e-19 99.8 163 41.7
BcaB04g21269 Brassica carinata HOM05D000222 ORTHO05D003997 8.0e-19 98.2 159 63.5
Sed0001256 Sechium edule HOM05D000222 ORTHO05D003997 2.3e-18 96.7 175 42.3
SMO337G0014 Selaginella moellendorffii HOM05D000222 ORTHO05D003997 2.3e-18 96.7 183 37.7
CSS0045294 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D003997 2.0e-17 93.6 156 41.7
Lsat_1_v5_gn_6_61640 Lactuca sativa HOM05D000222 ORTHO05D003997 1.3e-16 90.9 202 36.1
Sopen05g019450 Solanum pennellii HOM05D000222 ORTHO05D003997 2.8e-16 89.7 157 63.7
RcHm_v2.0_Chr7g0215721 Rosa chinensis HOM05D000222 ORTHO05D017589 3.7e-16 89.4 195 40.0
Ca_02717_v3 Cicer arietinum L. HOM05D000068 ORTHO05D011548 3.5e-14 82.8 69 63.8
BolC5t34609H Brassica oleracea HOM05D000222 ORTHO05D003997 7.7e-14 81.6 159 39.0
BraA05t22777Z Brassica rapa HOM05D000222 ORTHO05D003997 7.7e-14 81.6 159 59.7
A05p40440 Brassica napus HOM05D000222 ORTHO05D003997 1.0e-13 81.3 159 54.7
C05p59540 Brassica napus HOM05D000222 ORTHO05D003997 2.3e-13 80.1 196 35.7
Ca_11540_v3 Cicer arietinum L. HOM05D000222 ORTHO05D003997 8.6e-13 78.2 69 59.4
Ca_30994_v3 Cicer arietinum L. HOM05D000222 ORTHO05D003997 8.6e-13 78.2 69 59.4
BcaC04g23791 Brassica carinata HOM05D000222 ORTHO05D003997 4.3e-12 75.9 69 59.4
Sp3g06710 Schrenkiella parvula HOM05D000222 ORTHO05D003997 5.6e-12 75.5 145 61.4
Ca_09071_v3 Cicer arietinum L. HOM05D000222 ORTHO05D003461 2.8e-11 73.2 57 66.7
ATR0624G031 Amborella trichopoda HOM05D000222 ORTHO05D003997 3.6e-11 72.8 210 47.6
GSVIVG01002881001 Vitis vinifera HOM05D000222 ORTHO05D003997 1.0e-10 71.2 69 56.5
COL.COLO4_09801 Corchorus olitorius HOM05D000222 ORTHO05D003997 1.4e-10 70.9 65 53.8
Pp3c20_20250 Physcomitrium patens HOM05D000222 ORTHO05D003997 1.2e-09 67.8 214 27.1
Pp3c10_23730 Physcomitrium patens HOM05D000222 ORTHO05D003997 1.3e-08 64.3 191 27.7
AagrBONN_evm.TU.Sc2ySwM_344.1667 Anthoceros agrestis HOM05D000222 ORTHO05D003997 1.7e-08 63.9 67 55.2
FAN08G1811 Fragaria x ananassa HOM05D000222 ORTHO05D017589 8.3e-08 61.6 128 37.5
FAN13G3251 Fragaria x ananassa HOM05D000222 ORTHO05D017589 8.3e-08 61.6 128 37.5
BcaB04g19559 Brassica carinata HOM05D000222 ORTHO05D003997 5.4e-07 58.9 76 51.3
FAN18G1398 Fragaria x ananassa HOM05D000222 ORTHO05D017589 1.2e-06 57.8 144 35.4


User provided reference genes

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