Gene: AT3G07780
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G07780
- Transcript Identifier AT3G07780.3
- Gene Type Coding gene
- Location Chr3 : 2485104-2486876 : positive
Gene Family Information
- ID HOM05D000222
- #Genes/#Species 1857/100
- Phylogenetic origin
- ID ORTHO05D003997
- #Genes/#Species 195/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G07780.3
- symbol OBE1
- full_name OBERON1
- uniprot Q9S736
Descriptions
- Description potyvirus VPg interacting protein (DUF1423)
- Computational description OBERON1 (OBE1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Zinc finger, PHD-type (InterPro:IPR001965); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1423) (TAIR:AT5G48160.2); Has 8996 Blast hits to 6188 proteins in 768 species: Archae - 88; Bacteria - 1159; Metazoa - 3345; Fungi - 619; Plants - 512; Viruses - 79; Other Eukaryotes - 3194 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010468 | IGI | Gene Ontology | regulation of gene expression | 1 |
| GO:0006457 | ISO | PLAZA Homology (enrichment) | protein folding | HOM05D000222 |
| GO:0031347 | IMP | Gene Ontology | regulation of defense response | 2 |
| GO:0080022 | IGI | Gene Ontology | primary root development | 1 |
| GO:0010492 | IGI | Gene Ontology | maintenance of shoot apical meristem identity | 3 |
| GO:0010078 | IGI | Gene Ontology | maintenance of root meristem identity | 3 |
| GO:0010071 | IGI | Gene Ontology | root meristem specification | 3 |
| GO:0009793 | IGI | Gene Ontology | embryo development ending in seed dormancy | 3 |
| GO:0046740 | IMP | Gene Ontology | transport of virus in host, cell to cell | 4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051082 | ISO | PLAZA Homology (enrichment) | unfolded protein binding | HOM05D000222 |
| GO:0005524 | ISO | PLAZA Homology (enrichment) | ATP binding | HOM05D000222 |
| GO:0016887 | ISO | PLAZA Homology (enrichment) | ATP hydrolysis activity | HOM05D000222 |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0042802 | IPI | Gene Ontology | identical protein binding | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0046982 | TAS | Gene Ontology | protein heterodimerization activity | 3 |
| GO:0042803 | TAS | Gene Ontology | protein homodimerization activity | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009536 | IDA | GOA Database | plastid | |
| GO:0009536 | HDA | Gene Ontology | plastid | 5 |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA | Gene Ontology | nucleus | 3 |
| GO:0005654 | IDA | Gene Ontology | nucleoplasm | |
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |