Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003503 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 5.6e-234 813.9 418 100.0
CSS0044023 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 1.3e-225 786.2 418 96.4
CSS0032867 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 3.9e-211 738.0 426 90.4
Rhsim08G0029000 Rhododendron simsii HOM05D013671 ORTHO05D012833 3.2e-27 127.1 348 32.8
Lju1319C1T3 Lonicera japonica HOM05D028833 ORTHO05D012833 5.2e-22 109.8 407 26.8
Lj2P186T15 Lonicera japonica HOM05D021051 ORTHO05D012833 4.9e-20 103.2 373 27.9
Lj2C2T10 Lonicera japonica HOM05D021051 ORTHO05D012833 1.1e-19 102.1 355 27.9
Lj2P199T12 Lonicera japonica HOM05D021051 ORTHO05D012833 2.4e-19 100.9 177 33.3
vmacro05204 Vaccinium macrocarpon HOM05D013671 ORTHO05D012833 7.1e-19 99.4 162 38.9
Rhsim10G0034900 Rhododendron simsii HOM05D013671 ORTHO05D012833 9.2e-19 99.0 178 39.9
Dinv40328 Davidia involucrata HOM05D013671 ORTHO05D012833 1.7e-17 94.7 331 29.0
Lju1319C0T4 Lonicera japonica HOM05D028833 ORTHO05D012833 9.0e-14 82.4 262 27.5
Dinv30645 Davidia involucrata HOM05D013671 ORTHO05D012833 3.4e-13 80.5 272 28.7
Dinv06305 Davidia involucrata HOM05D013671 ORTHO05D012833 3.5e-10 70.5 110 35.5
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 5.1e-09 66.6 99 40.4
Rhsim06G0096900 Rhododendron simsii HOM05D013671 ORTHO05D012833 8.7e-09 65.9 213 32.9
Lj2P186T14 Lonicera japonica HOM05D021051 ORTHO05D012833 4.3e-08 63.5 75 42.7
Prupe.5G157900 Prunus persica HOM05D013255 ORTHO05D011422 9.6e-08 62.4 189 26.5
Aqoxy2G03550 Aquilegia oxysepala HOM05D013671 ORTHO05D010877 2.1e-07 61.2 110 35.5
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 2.8e-07 60.8 132 25.8
QL11p018809 Quercus lobata HOM05D041046 ORTHO05D021181 2.8e-07 60.8 275 25.8
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 2.8e-07 60.8 163 31.3
Peaxi162Scf00359g00005 Petunia axillaris HOM05D000249 ORTHO05D000206 4.8e-07 60.1 116 33.6
Actinidia16043 Actinidia chinensis HOM05D000249 ORTHO05D000206 6.2e-07 59.7 114 33.3
AT5G39560 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 6.2e-07 59.7 155 26.5
CAN.G767.7 Capsicum annuum HOM05D000249 ORTHO05D000206 6.2e-07 59.7 98 35.7
Ah.09g227600 Amaranthus hybridus HOM05D037678 ORTHO05D012136 1.1e-06 58.9 187 25.7
PGSC0003DMG400016578 Solanum tuberosum HOM05D000249 ORTHO05D000206 1.1e-06 58.9 127 29.9
Cc07_g16260 Coffea canephora HOM05D000249 ORTHO05D000206 1.4e-06 58.5 98 32.7
Hma1.2p1_0375F.1_g138740 Hydrangea macrophylla HOM05D000249 ORTHO05D000206 1.4e-06 58.5 98 31.6
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 1.4e-06 58.5 122 32.0
Rhsim10G0150200 Rhododendron simsii HOM05D000249 ORTHO05D000206 1.4e-06 58.5 115 32.2
CAN.G65.201 Capsicum annuum HOM05D000249 ORTHO05D000206 2.4e-06 57.8 98 34.7
Dinv19486 Davidia involucrata HOM05D000249 ORTHO05D000206 2.4e-06 57.8 113 31.0
Dinv24217 Davidia involucrata HOM05D003963 ORTHO05D004558 3.1e-06 57.4 162 26.5
Nn1g05186 Nelumbo nucifera HOM05D000249 ORTHO05D000206 4.0e-06 57.0 98 33.7
PGR044G2517 Punica granatum HOM05D023452 ORTHO05D019051 4.0e-06 57.0 114 34.2
Cc07_g16240 Coffea canephora HOM05D000249 ORTHO05D000206 5.3e-06 56.6 98 31.6


User provided reference genes

Program Settings