Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003432 Camellia sinensis var. sinensis HOM05D003754 ORTHO05D004530 3.5e-55 218.0 106 100.0
Dinv05184 Davidia involucrata HOM05D003754 ORTHO05D004530 1.3e-25 119.8 89 69.7
vmacro18661 Vaccinium macrocarpon HOM05D003754 ORTHO05D004530 3.7e-25 118.2 91 70.3
Actinidia06664 Actinidia chinensis HOM05D003754 ORTHO05D004530 3.2e-24 115.2 90 66.7
Actinidia09819 Actinidia chinensis HOM05D003754 ORTHO05D004530 9.2e-24 113.6 85 70.6
Lj4A856T33 Lonicera japonica HOM05D003754 ORTHO05D004530 1.0e-22 110.2 87 71.3
DCAR_014347 Daucus carota HOM05D003754 ORTHO05D004530 1.3e-22 109.8 92 60.9
Hma1.2p1_1882F.1_g306410 Hydrangea macrophylla HOM05D003754 ORTHO05D004530 1.1e-21 106.7 91 63.7
VMungo1309G1400 Vigna mungo HOM05D003754 ORTHO05D004530 5.6e-21 104.4 94 60.6
Phvul.009G147600 Phaseolus vulgaris HOM05D003754 ORTHO05D004530 9.5e-21 103.6 93 60.2
Hma1.2p1_0252F.1_g102755 Hydrangea macrophylla HOM05D003754 ORTHO05D004530 1.2e-20 103.2 92 65.2
Hma1.2p1_0975F.1_g243110 Hydrangea macrophylla HOM05D003754 ORTHO05D004530 1.2e-20 103.2 92 65.2
Peaxi162Scf00025g02016 Petunia axillaris HOM05D003754 ORTHO05D004530 1.6e-20 102.8 72 72.2
Duzib264G0672 Durio zibethinus HOM05D003754 ORTHO05D004530 4.7e-20 101.3 93 62.4
MBI07_g22390_MAGBIO Magnolia biondii HOM05D003754 ORTHO05D004530 4.7e-20 101.3 89 59.6
COL.COLO4_22427 Corchorus olitorius HOM05D003754 ORTHO05D004530 6.2e-20 100.9 93 62.4
Duzib187G1293 Durio zibethinus HOM05D003754 ORTHO05D004530 8.1e-20 100.5 93 61.3
Cfa002865 Carpinus fangiana HOM05D003754 ORTHO05D004530 1.4e-19 99.8 96 63.5
Gohir.A11G227533 Gossypium hirsutum HOM05D003754 ORTHO05D004530 1.4e-19 99.8 93 60.2
Gorai.003G069700 Gossypium raimondii HOM05D003754 ORTHO05D004530 1.4e-19 99.8 93 60.2
Atru.chr4.2901 Acer truncatum HOM05D003754 ORTHO05D004530 1.8e-19 99.4 93 60.2
Sed0005502 Sechium edule HOM05D003754 ORTHO05D004530 1.8e-19 99.4 95 60.0
Sed0026112 Sechium edule HOM05D003754 ORTHO05D004530 1.8e-19 99.4 95 60.0
CiPaw.03G124200 Carya illinoinensis HOM05D003754 ORTHO05D004530 2.3e-19 99.0 94 62.8
Medtr4g103830 Medicago truncatula HOM05D003754 ORTHO05D004530 3.1e-19 98.6 92 63.0
Nitab4.5_0000540g0290 Nicotiana tabacum HOM05D003754 ORTHO05D004530 3.1e-19 98.6 93 62.4
Gohir.D11G231200 Gossypium hirsutum HOM05D003754 ORTHO05D004530 4.0e-19 98.2 93 59.1
PGR142G4345 Punica granatum HOM05D003754 ORTHO05D004530 4.0e-19 98.2 88 59.1
Haze_25183 Corylus avellana HOM05D003754 ORTHO05D004530 5.2e-19 97.8 96 61.5
QL06p051895 Quercus lobata HOM05D003754 ORTHO05D004530 5.2e-19 97.8 95 58.9
ECA246G0381 Erigeron canadensis HOM05D003754 ORTHO05D004530 8.9e-19 97.1 88 61.4
MD03G1020600 Malus domestica HOM05D003754 ORTHO05D004530 8.9e-19 97.1 93 59.1
Glyma.06G150000 Glycine max HOM05D003754 ORTHO05D004530 1.5e-18 96.3 93 59.1
SGA_v2.0_scaffold47G17755 Striga asiatica HOM05D003754 ORTHO05D004530 1.5e-18 96.3 98 57.1
TPR.G18713 Trifolium pratense HOM05D003754 ORTHO05D004530 2.0e-18 95.9 92 60.9
Solyc03g115630.3 Solanum lycopersicum HOM05D003754 ORTHO05D004530 2.6e-18 95.5 87 60.9
Atru.chr4.649 Acer truncatum HOM05D003754 ORTHO05D004530 3.4e-18 95.1 93 59.1
Ciclev10025660m.g Citrus clementina HOM05D003754 ORTHO05D004530 3.4e-18 95.1 94 57.4
Sed0000423 Sechium edule HOM05D003754 ORTHO05D004530 3.4e-18 95.1 94 57.4
Thecc.01G121700 Theobroma cacao HOM05D003754 ORTHO05D004530 3.4e-18 95.1 89 58.4
MELO3C011808.2 Cucumis melo HOM05D003754 ORTHO05D004530 4.4e-18 94.7 95 57.9
CsaV3_5G029640 Cucumis sativus L. HOM05D003754 ORTHO05D004530 4.4e-18 94.7 95 58.9
Nn7g38167 Nelumbo nucifera HOM05D003754 ORTHO05D004530 4.4e-18 94.7 65 73.8
TPR.G3506 Trifolium pratense HOM05D003754 ORTHO05D004530 4.4e-18 94.7 92 59.8
arahy.Tifrunner.gnm1.ann1.RLN2F0 Arachis hypogaea HOM05D003754 ORTHO05D004530 5.8e-18 94.4 99 54.5
ClCG11G013120 Citrullus lanatus HOM05D003754 ORTHO05D004530 5.8e-18 94.4 95 55.8
Nitab4.5_0008523g0020 Nicotiana tabacum HOM05D003754 ORTHO05D004530 5.8e-18 94.4 69 72.5
Sopen03g034620 Solanum pennellii HOM05D003754 ORTHO05D004530 5.8e-18 94.4 87 60.9
arahy.Tifrunner.gnm1.ann1.2GFV1T Arachis hypogaea HOM05D003754 ORTHO05D004530 7.5e-18 94.0 92 58.7
TAR625G1071 Trochodendron aralioides HOM05D003754 ORTHO05D004530 7.5e-18 94.0 94 59.6
Gohir.A11G054600 Gossypium hirsutum HOM05D003754 ORTHO05D004530 9.8e-18 93.6 95 58.9
Lsat_1_v5_gn_2_115701 Lactuca sativa HOM05D003754 ORTHO05D004530 9.8e-18 93.6 92 60.9
Glyma.04G216000 Glycine max HOM05D003754 ORTHO05D004530 1.3e-17 93.2 93 58.1
MD11G1021800 Malus domestica HOM05D003754 ORTHO05D004530 1.3e-17 93.2 89 58.4
RcHm_v2.0_Chr2g0150151 Rosa chinensis HOM05D003754 ORTHO05D004530 1.3e-17 93.2 82 61.0
RcHm_v2.0_Chr5g0078331 Rosa chinensis HOM05D003754 ORTHO05D004530 1.3e-17 93.2 81 60.5
Hund00470 Selenicereus undatus HOM05D003754 ORTHO05D004530 1.3e-17 93.2 89 59.6
GSVIVG01026584001 Vitis vinifera HOM05D003754 ORTHO05D004530 1.3e-17 93.2 88 58.0
AUR62017270 Chenopodium quinoa HOM05D003754 ORTHO05D004530 1.7e-17 92.8 90 58.9
Cc07_g17390 Coffea canephora HOM05D003754 ORTHO05D004530 1.7e-17 92.8 64 73.4
FvH4_3g43670 Fragaria vesca HOM05D003754 ORTHO05D004530 1.7e-17 92.8 65 70.8
FAN11G0854 Fragaria x ananassa HOM05D003754 ORTHO05D004530 1.7e-17 92.8 65 70.8
FAN21G2117 Fragaria x ananassa HOM05D003754 ORTHO05D004530 1.7e-17 92.8 65 70.8
Glyma.05G188500 Glycine max HOM05D003754 ORTHO05D004530 1.7e-17 92.8 89 60.7
SalBow5G2472 Salvia bowleyana HOM05D003754 ORTHO05D004530 1.7e-17 92.8 80 61.2
SalBow5G4447 Salvia bowleyana HOM05D003754 ORTHO05D004530 1.7e-17 92.8 80 61.2
CAN.G1241.25 Capsicum annuum HOM05D003754 ORTHO05D004530 2.2e-17 92.4 69 69.6
Medtr3g095490 Medicago truncatula HOM05D003754 ORTHO05D004530 2.2e-17 92.4 93 58.1
Prupe.6G016000 Prunus persica HOM05D003754 ORTHO05D004530 2.2e-17 92.4 65 72.3
PGSC0003DMG401024557 Solanum tuberosum HOM05D003754 ORTHO05D004530 2.2e-17 92.4 92 57.6
Gorai.007G063500 Gossypium raimondii HOM05D003754 ORTHO05D004530 2.9e-17 92.0 95 57.9
Lalb_Chr13g0296421 Lupinus albus HOM05D003754 ORTHO05D004530 2.9e-17 92.0 92 57.6
Psat5g063800 Pisum sativum HOM05D003754 ORTHO05D004530 2.9e-17 92.0 92 57.6
ATR0787G147 Amborella trichopoda HOM05D003754 ORTHO05D004530 3.7e-17 91.7 88 55.7
EL10Ac4g10006 Beta vulgaris HOM05D003754 ORTHO05D004530 3.7e-17 91.7 89 57.3
FvH4_5g29030 Fragaria vesca HOM05D003754 ORTHO05D004530 3.7e-17 91.7 78 62.8
PGSC0003DMG400000337 Solanum tuberosum HOM05D003754 ORTHO05D004530 3.7e-17 91.7 83 59.0
TWI79G1638 Tripterygium wilfordii HOM05D003754 ORTHO05D004530 3.7e-17 91.7 91 59.3
MSTRG.2686 Avicennia marina HOM05D003754 ORTHO05D004530 4.9e-17 91.3 92 58.7
Gohir.D11G058200 Gossypium hirsutum HOM05D003754 ORTHO05D004530 6.4e-17 90.9 95 56.8
HanXRQChr05g0132711 Helianthus annuus HOM05D003754 ORTHO05D004530 6.4e-17 90.9 88 56.8
FAN16G1056 Fragaria x ananassa HOM05D003754 ORTHO05D004530 8.3e-17 90.5 65 69.2
Lalb_Chr12g0203311 Lupinus albus HOM05D003754 ORTHO05D004530 8.3e-17 90.5 92 56.5
EL10Ac7g16883 Beta vulgaris HOM05D003754 ORTHO05D004530 1.1e-16 90.1 71 64.8
FAN13G0594 Fragaria x ananassa HOM05D003754 ORTHO05D004530 1.1e-16 90.1 78 62.8
FAN25G1759 Fragaria x ananassa HOM05D003754 ORTHO05D004530 1.1e-16 90.1 65 69.2
Oeu037781.1 Olea europaea HOM05D003754 ORTHO05D004530 1.1e-16 90.1 78 62.8
Oeu047648.2 Olea europaea HOM05D003754 ORTHO05D004530 1.1e-16 90.1 93 54.8
CANSAT01G2639 Cannabis sativa HOM05D003754 ORTHO05D004530 1.4e-16 89.7 78 60.3
Sc25g0003300 Simmondsia chinensis HOM05D003754 ORTHO05D004530 1.4e-16 89.7 65 67.7
Migut.H01123 Erythranthe guttata HOM05D003754 ORTHO05D004530 2.4e-16 89.0 68 67.6
AUR62010627 Chenopodium quinoa HOM05D003754 ORTHO05D004530 3.2e-16 88.6 90 56.7
Eucgr.I00242 Eucalyptus grandis HOM05D003754 ORTHO05D004530 3.2e-16 88.6 71 66.2
CAN.G479.50 Capsicum annuum HOM05D003754 ORTHO05D004530 5.4e-16 87.8 90 55.6
Manes.13G086500 Manihot esculenta HOM05D003754 ORTHO05D004530 5.4e-16 87.8 75 58.7
Ah.15g092910 Amaranthus hybridus HOM05D003754 ORTHO05D004530 7.1e-16 87.4 61 70.5
Aqoxy1G00632 Aquilegia oxysepala HOM05D003754 ORTHO05D004530 1.2e-15 86.7 71 66.2
Pp3c7_8810 Physcomitrium patens HOM05D003754 ORTHO05D004530 2.1e-15 85.9 65 61.5
Potri.001G153400 Populus trichocarpa HOM05D003754 ORTHO05D004530 2.1e-15 85.9 69 60.9
Lj1g0021659 Lotus japonicus HOM05D003754 ORTHO05D004530 2.7e-15 85.5 93 54.8
PSO017G1739 Papaver somniferum HOM05D003754 ORTHO05D004530 2.7e-15 85.5 71 62.0
Potri.003G080900 Populus trichocarpa HOM05D003754 ORTHO05D004530 2.7e-15 85.5 69 60.9
Ca_16915_v3 Cicer arietinum L. HOM05D003754 ORTHO05D004530 3.5e-15 85.1 93 55.9
FAN18G2098 Fragaria x ananassa HOM05D003754 ORTHO05D004530 3.5e-15 85.1 95 51.6
PSO675G1326 Papaver somniferum HOM05D003754 ORTHO05D004530 3.5e-15 85.1 71 62.0
Prupe.6G163300 Prunus persica HOM05D003754 ORTHO05D004530 6.0e-15 84.3 65 66.2
arahy.Tifrunner.gnm1.ann1.IAY1GN Arachis hypogaea HOM05D003754 ORTHO05D004530 7.8e-15 84.0 90 55.6
Peaxi162Scf00498g00315 Petunia axillaris HOM05D003754 ORTHO05D004530 7.8e-15 84.0 42 92.9
vmacro21315 Vaccinium macrocarpon HOM05D003754 ORTHO05D004530 7.8e-15 84.0 49 81.6
VMungo0251G2586 Vigna mungo HOM05D003754 ORTHO05D004530 7.8e-15 84.0 89 56.2
Cpa.g.sc42.92 Carica papaya HOM05D003754 ORTHO05D004530 1.3e-14 83.2 89 49.4
CDE02G3666 Ceratophyllum demersum HOM05D003754 ORTHO05D004530 2.3e-14 82.4 73 64.4
PSO063G2422 Papaver somniferum HOM05D003754 ORTHO05D004530 2.3e-14 82.4 100 51.0
HPP92_024507 Vanilla planifolia HOM05D003754 ORTHO05D004530 3.0e-14 82.0 42 88.1
HPP92_024510 Vanilla planifolia HOM05D003754 ORTHO05D004530 3.0e-14 82.0 44 86.4
arahy.Tifrunner.gnm1.ann1.H83BDD Arachis hypogaea HOM05D003754 ORTHO05D004530 3.9e-14 81.6 90 54.4
Sabra01G0123200 Salix brachista HOM05D003754 ORTHO05D004530 3.9e-14 81.6 69 59.4
Dinv09929 Davidia involucrata HOM05D003754 ORTHO05D004530 5.1e-14 81.3 44 84.1
Sabra03G0052100 Salix brachista HOM05D003754 ORTHO05D004530 5.1e-14 81.3 69 58.0
Zm00001eb188530 Zea mays HOM05D003754 ORTHO05D004530 5.1e-14 81.3 42 85.7
MD15G1342500 Malus domestica HOM05D003754 ORTHO05D004530 6.6e-14 80.9 65 64.6
SEGI_39075 Sequoiadendron giganteum HOM05D003754 ORTHO05D004530 8.6e-14 80.5 75 54.7
Zm00001eb252240 Zea mays HOM05D003754 ORTHO05D004530 8.6e-14 80.5 70 57.1
Os02g0708100 Oryza sativa ssp. japonica HOM05D003754 ORTHO05D004530 1.1e-13 80.1 42 83.3
Pp3c11_11760 Physcomitrium patens HOM05D003754 ORTHO05D004530 1.1e-13 80.1 80 51.2
A07p35920 Brassica napus HOM05D003754 ORTHO05D004530 1.5e-13 79.7 92 50.0
PSO170G5654 Papaver somniferum HOM05D003754 ORTHO05D004530 1.5e-13 79.7 100 50.0
Aqoxy5G02121 Aquilegia oxysepala HOM05D003754 ORTHO05D004530 1.9e-13 79.3 71 60.6
BraA07t31175Z Brassica rapa HOM05D003754 ORTHO05D004530 1.9e-13 79.3 92 50.0
BolC6t39404H Brassica oleracea HOM05D003754 ORTHO05D004530 3.3e-13 78.6 92 51.1
CDE09G1207 Ceratophyllum demersum HOM05D003754 ORTHO05D004530 3.3e-13 78.6 41 87.8
BcaC08g46397 Brassica carinata HOM05D003754 ORTHO05D004530 4.3e-13 78.2 92 50.0
C06p43290 Brassica napus HOM05D003754 ORTHO05D004530 4.3e-13 78.2 92 50.0
HanXRQChr16g0507191 Helianthus annuus HOM05D003754 ORTHO05D004530 4.3e-13 78.2 40 87.5
Sp5g24680 Schrenkiella parvula HOM05D003754 ORTHO05D004530 4.3e-13 78.2 78 53.8
AL5G17190 Arabidopsis lyrata HOM05D003754 ORTHO05D004530 5.6e-13 77.8 96 49.0
AT3G27740 Arabidopsis thaliana HOM05D003754 ORTHO05D004530 5.6e-13 77.8 96 49.0
arahy.Tifrunner.gnm1.ann1.KN16SD Arachis hypogaea HOM05D003754 ORTHO05D004530 9.5e-13 77.0 43 81.4
CARHR038270 Cardamine hirsuta HOM05D003754 ORTHO05D004530 9.5e-13 77.0 85 54.1
SMO164G0151 Selaginella moellendorffii HOM05D003754 ORTHO05D004530 9.5e-13 77.0 42 78.6
SMO292G0005 Selaginella moellendorffii HOM05D003754 ORTHO05D004530 9.5e-13 77.0 42 78.6
THA.LOC104820363 Tarenaya hassleriana HOM05D003754 ORTHO05D004530 1.6e-12 76.3 61 65.6
BcaB03g14725 Brassica carinata HOM05D003754 ORTHO05D004530 2.1e-12 75.9 79 53.2
Thhalv10018601m.g Eutrema salsugineum HOM05D003754 ORTHO05D004530 2.1e-12 75.9 78 52.6
BcaB05g24461 Brassica carinata HOM05D003754 ORTHO05D004530 2.8e-12 75.5 60 61.7
CBR_g8394 Chara braunii HOM05D003754 ORTHO05D004530 2.8e-12 75.5 55 65.5
Carub.0005s0630 Capsella rubella HOM05D003754 ORTHO05D004530 3.6e-12 75.1 93 45.2
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 4.7e-12 74.7 80 51.2
Mapoly0008s0155 Marchantia polymorpha HOM05D003754 ORTHO05D004530 4.7e-12 74.7 86 48.8
C02p26550 Brassica napus HOM05D003754 ORTHO05D004530 8.1e-12 73.9 76 51.3
BcaC03g15094 Brassica carinata HOM05D003754 ORTHO05D004530 1.1e-11 73.6 76 51.3
A02p15970 Brassica napus HOM05D003754 ORTHO05D004530 1.4e-11 73.2 76 51.3
BolC2t08726H Brassica oleracea HOM05D003754 ORTHO05D004530 4.0e-11 71.6 82 48.8
BraA02t06656Z Brassica rapa HOM05D003754 ORTHO05D004530 4.0e-11 71.6 82 48.8
AagrBONN_evm.TU.Sc2ySwM_117.1845 Anthoceros agrestis HOM05D003754 ORTHO05D004530 6.8e-11 70.9 60 60.0
MCO05G701 Micromonas commoda HOM05D003754 ORTHO05D004530 1.2e-10 70.1 42 71.4
Nn5g28719 Nelumbo nucifera HOM05D003754 ORTHO05D004530 1.2e-10 70.1 92 50.0
unitig_699.g19714 Utricularia gibba HOM05D003754 ORTHO05D004530 7.6e-10 67.4 62 58.1
Cre06.g308500 Chlamydomonas reinhardtii HOM05D003754 ORTHO05D004530 1.4e-08 63.2 46 60.9


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