Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003289 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 1.2e-115 419.9 209 100.0
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 5.5e-89 331.3 202 81.2
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 1.8e-87 326.2 202 79.7
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 4.0e-87 325.1 202 79.7
vmacro17378 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 4.4e-86 321.6 188 84.0
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 2.2e-85 319.3 201 77.1
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 5.9e-83 311.2 202 74.3
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 7.7e-83 310.8 202 73.3
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 3.3e-81 305.4 201 73.6
Haze_02194 Corylus avellana HOM05D004110 ORTHO05D004810 7.2e-81 304.3 212 71.2
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 6.1e-80 301.2 201 71.6
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 8.0e-80 300.8 201 71.1
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 8.0e-80 300.8 201 71.1
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 8.0e-80 300.8 202 72.3
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 1.4e-79 300.1 201 72.1
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.8e-79 299.7 201 70.6
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 1.8e-79 299.7 209 70.3
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 4.0e-79 298.5 201 72.6
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 5.2e-79 298.1 207 71.5
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 2.6e-78 295.8 204 73.0
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 7.5e-78 294.3 201 70.1
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 9.8e-78 293.9 187 74.9
MD10G1119400 Malus domestica HOM05D004110 ORTHO05D004810 1.7e-77 293.1 201 71.1
Nitab4.5_0006590g0020 Nicotiana tabacum HOM05D004110 ORTHO05D004810 2.8e-77 292.4 193 71.0
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 3.7e-77 292.0 201 69.2
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 6.3e-77 291.2 202 68.8
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 1.1e-76 290.4 207 68.1
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 1.1e-76 290.4 202 70.3
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 1.4e-76 290.0 201 70.1
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 1.4e-76 290.0 201 71.6
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 3.1e-76 288.9 193 69.9
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 3.1e-76 288.9 193 69.9
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 4.1e-76 288.5 200 70.0
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 4.1e-76 288.5 202 69.8
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 4.1e-76 288.5 202 69.8
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 4.1e-76 288.5 206 71.4
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 5.4e-76 288.1 193 72.0
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 9.2e-76 287.3 200 69.0
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 2.0e-75 286.2 188 71.8
Cpa.g.sc37.188 Carica papaya HOM05D004110 ORTHO05D004810 2.3e-74 282.7 187 74.3
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 2.9e-74 282.3 207 67.1
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 3.9e-74 282.0 207 66.7
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 3.9e-74 282.0 202 67.8
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 6.6e-74 281.2 209 67.5
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 6.6e-74 281.2 201 68.2
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 8.6e-74 280.8 200 67.5
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 1.9e-73 279.6 203 68.0
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 3.3e-73 278.9 207 65.2
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 4.3e-73 278.5 202 67.3
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 5.6e-73 278.1 207 65.2
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 7.3e-73 277.7 207 64.3
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 2.1e-72 276.2 202 66.3
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 2.8e-72 275.8 201 66.7
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 2.8e-72 275.8 206 68.9
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 3.6e-72 275.4 219 62.6
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 6.1e-72 274.6 207 64.7
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 6.1e-72 274.6 207 64.7
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 6.1e-72 274.6 207 64.3
CAN.G603.2 Capsicum annuum HOM05D004110 ORTHO05D004810 8.0e-72 274.2 220 62.3
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 1.8e-71 273.1 206 65.5
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 3.1e-71 272.3 202 65.3
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 5.8e-70 268.1 201 64.2
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 7.5e-70 267.7 201 64.7
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 9.8e-70 267.3 201 65.2
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 9.8e-70 267.3 202 64.4
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 9.8e-70 267.3 202 63.4
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 1.3e-69 266.9 187 66.8
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 1.7e-69 266.5 201 64.2
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 1.7e-69 266.5 203 61.6
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 3.7e-69 265.4 202 63.9
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 3.7e-69 265.4 197 65.0
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 4.9e-69 265.0 201 64.7
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 1.4e-68 263.5 193 67.4
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 1.9e-68 263.1 201 63.2
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 1.9e-68 263.1 201 63.2
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 9.2e-68 260.8 199 63.3
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 9.2e-68 260.8 202 61.9
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 1.2e-67 260.4 201 62.7
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 1.2e-67 260.4 201 62.7
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 1.2e-67 260.4 187 70.1
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 2.0e-67 259.6 202 62.9
Glyma.11G098551 Glycine max HOM05D004110 ORTHO05D004810 1.0e-66 257.3 188 64.9
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 2.6e-62 242.7 201 58.7
CDE05G0764 Ceratophyllum demersum HOM05D004110 ORTHO05D004810 6.0e-59 231.5 188 58.0
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 7.8e-59 231.1 188 58.5
SHI05691 Sapria himalayana HOM05D004110 ORTHO05D004810 6.2e-56 221.5 192 59.4
HPP92_005008 Vanilla planifolia HOM05D004110 ORTHO05D004810 8.1e-56 221.1 195 54.9
Duzib248G1214 Durio zibethinus HOM05D004110 ORTHO05D004810 3.9e-50 202.2 135 71.9
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 4.3e-49 198.7 188 51.1
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 2.1e-48 196.4 208 49.5
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 2.1e-43 179.9 195 42.1
ClCG02G011580 Citrullus lanatus HOM05D004110 ORTHO05D004810 1.9e-41 173.3 120 68.3
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 1.9e-41 173.3 199 41.7
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 8.4e-37 157.9 238 34.9
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 1.1e-28 131.0 133 51.1
ClCG02G011590 Citrullus lanatus HOM05D004110 ORTHO05D004810 3.4e-22 109.4 92 56.5
Psat1g093160 Pisum sativum HOM05D004110 ORTHO05D004810 2.5e-17 93.2 71 60.6
BolC8t52466H Brassica oleracea HOM05D004110 ORTHO05D004810 8.4e-13 78.2 46 67.4
VMungo0464G1786 Vigna mungo HOM05D004110 ORTHO05D004810 2.3e-10 70.1 58 53.4


User provided reference genes

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