Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 4.3e-181 637.9 323 100.0
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 3.5e-167 591.7 315 93.0
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 3.5e-167 591.7 315 92.1
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.0e-166 590.1 315 93.7
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 1.0e-166 590.1 315 92.4
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 2.3e-166 589.0 315 92.7
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 3.9e-166 588.2 315 93.0
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 8.6e-166 587.0 314 92.4
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 1.1e-165 586.6 313 93.0
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 1.1e-165 586.6 315 92.4
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 1.5e-165 586.3 315 92.1
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 1.9e-165 585.9 315 92.4
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 1.9e-165 585.9 315 92.1
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 1.9e-165 585.9 315 92.7
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 2.5e-165 585.5 315 91.7
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 3.3e-165 585.1 315 91.7
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 4.3e-165 584.7 315 92.4
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 5.6e-165 584.3 315 91.7
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 7.3e-165 583.9 315 91.7
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 7.3e-165 583.9 315 92.4
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 1.6e-164 582.8 315 91.4
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 1.6e-164 582.8 315 91.4
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 2.1e-164 582.4 338 87.0
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 2.8e-164 582.0 315 90.8
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 2.8e-164 582.0 315 91.7
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 3.6e-164 581.6 315 91.4
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 4.7e-164 581.3 315 92.1
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 6.2e-164 580.9 311 92.0
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 6.2e-164 580.9 315 91.7
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 8.1e-164 580.5 315 91.7
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 1.1e-163 580.1 315 91.1
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 1.4e-163 579.7 315 91.4
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 1.4e-163 579.7 315 91.4
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 1.4e-163 579.7 315 91.4
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 1.4e-163 579.7 316 91.1
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.8e-163 579.3 315 91.1
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 2.4e-163 578.9 315 90.8
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 2.4e-163 578.9 315 91.1
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 3.1e-163 578.6 315 91.7
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 5.2e-163 577.8 315 91.4
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 5.2e-163 577.8 315 90.8
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 5.2e-163 577.8 314 92.0
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 5.2e-163 577.8 315 91.4
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 6.9e-163 577.4 315 91.1
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 6.9e-163 577.4 315 91.1
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 8.9e-163 577.0 315 91.4
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 8.9e-163 577.0 315 90.5
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 1.5e-162 576.2 315 91.1
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 2.0e-162 575.9 315 91.1
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 2.0e-162 575.9 315 90.8
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 2.0e-162 575.9 314 89.8
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 7.6e-162 573.9 315 90.5
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 9.9e-162 573.5 315 90.5
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 1.3e-161 573.2 315 89.2
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 1.3e-161 573.2 315 90.5
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 1.7e-161 572.8 315 90.5
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 1.7e-161 572.8 315 89.8
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 1.7e-161 572.8 315 89.8
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 2.2e-161 572.4 315 89.5
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 2.9e-161 572.0 315 89.8
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 3.8e-161 571.6 315 89.5
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 6.4e-161 570.9 315 89.5
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 8.4e-161 570.5 315 89.8
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.1e-160 570.1 315 90.5
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.1e-160 570.1 315 90.5
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 1.1e-160 570.1 315 89.8
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 1.4e-160 569.7 315 89.2
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 1.4e-160 569.7 315 89.5
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 1.4e-160 569.7 315 88.6
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 1.9e-160 569.3 315 89.2
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 3.2e-160 568.5 315 89.2
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 4.2e-160 568.2 315 89.5
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 5.4e-160 567.8 315 90.2
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 1.2e-159 566.6 314 89.2
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 1.0e-158 563.5 315 88.9
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 1.3e-158 563.1 310 90.6
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 1.7e-158 562.8 312 87.8
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 1.7e-158 562.8 304 92.1
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 5.1e-158 561.2 315 87.6
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 5.1e-158 561.2 315 87.3
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 3.3e-157 558.5 352 81.2
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 4.3e-157 558.1 315 86.7
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 7.3e-157 557.4 312 87.5
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 7.3e-157 557.4 315 87.6
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 7.3e-157 557.4 315 87.6
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 2.8e-156 555.4 304 89.5
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 4.8e-156 554.7 315 87.0
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 1.8e-155 552.7 315 87.0
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 2.4e-155 552.4 315 86.3
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 9.0e-155 550.4 315 86.0
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 9.0e-155 550.4 315 86.7
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 1.2e-154 550.1 315 86.0
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 2.0e-154 549.3 315 86.7
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 2.6e-154 548.9 346 80.9
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 7.6e-154 547.4 315 86.3
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 7.6e-154 547.4 315 85.1
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 1.7e-153 546.2 315 85.4
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 3.8e-153 545.0 304 88.5
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 6.4e-153 544.3 346 80.3
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 9.3e-152 540.4 315 85.7
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 2.7e-151 538.9 315 83.8
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 1.8e-150 536.2 304 86.5
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 5.1e-150 534.6 315 82.5
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 2.5e-149 532.3 315 81.3
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 7.4e-149 530.8 370 75.1
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 1.2e-146 523.5 315 80.6
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 1.3e-142 510.0 315 79.4
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 3.0e-142 508.8 315 83.8
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 1.1e-141 506.9 315 78.1
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 2.8e-140 502.3 315 78.1
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 3.1e-139 498.8 313 77.0
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 1.2e-138 496.9 315 75.6
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 1.7e-137 493.0 315 76.5
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 2.5e-136 489.2 319 74.3
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 5.1e-134 481.5 319 74.9
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 1.5e-130 469.9 315 72.4
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 4.5e-130 468.4 312 72.8
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 1.2e-119 433.7 317 66.2
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 1.8e-115 419.9 315 72.1
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 4.5e-114 415.2 315 68.3
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 1.7e-113 413.3 249 82.7
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 5.0e-113 411.8 239 84.5
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 4.7e-111 405.2 245 84.1
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 6.7e-110 401.4 228 86.8
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 7.4e-109 397.9 228 86.0
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 2.2e-105 386.3 286 69.6
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 3.2e-104 382.5 208 91.3
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 1.7e-97 360.1 199 88.4
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 3.8e-97 359.0 207 85.0
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 1.1e-96 357.5 195 90.3
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 2.0e-93 346.7 325 55.7
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 4.8e-92 342.0 194 86.6
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 4.2e-88 328.9 192 82.3
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 2.0e-85 320.1 320 54.1
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 4.1e-83 312.4 169 89.9
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 8.9e-78 294.7 242 62.0
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.1e-75 287.7 171 84.2
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 2.3e-73 280.0 195 67.7
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 3.3e-64 249.6 135 91.9
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 4.0e-54 216.1 121 88.4
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 2.1e-50 203.8 155 64.5
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 1.7e-49 200.7 121 78.5
CDE02G4314 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 1.1e-46 191.4 148 70.3
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea HOM05D004324 ORTHO05D004840 3.3e-40 169.9 87 94.3
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 9.3e-35 151.8 96 78.1
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 3.0e-33 146.7 74 94.6
Duzib177G0443 Durio zibethinus HOM05D004324 ORTHO05D004840 3.9e-33 146.4 101 78.2
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 1.9e-32 144.1 87 82.8
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 3.7e-31 139.8 78 85.9
CAN.G23.23 Capsicum annuum HOM05D004324 ORTHO05D004840 3.1e-30 136.7 78 83.3
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 4.5e-29 132.9 80 80.0
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 8.7e-25 118.6 127 56.7
Prupe.7G087800 Prunus persica HOM05D004324 ORTHO05D004840 2.0e-21 107.5 124 56.5
Cfa025533 Carpinus fangiana HOM05D000146 ORTHO05D004840 6.0e-18 95.9 320 26.6
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 1.3e-17 94.7 74 62.2
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 2.3e-17 94.0 285 28.8
Pp3s30_709 Physcomitrium patens HOM05D004324 ORTHO05D004840 1.1e-16 91.7 236 29.7
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 4.3e-16 89.7 68 66.2
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 4.8e-15 86.3 84 57.1
Ca_28979_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 1.4e-14 84.7 281 28.8
Cfa023222 Carpinus fangiana HOM05D004324 ORTHO05D004840 2.0e-13 80.9 268 29.9
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 3.4e-13 80.1 53 75.5
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.3e-12 78.2 103 48.5
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 1.6e-10 71.2 54 68.5
Cfa024978 Carpinus fangiana HOM05D004324 ORTHO05D034102 4.3e-08 63.2 192 28.1
Aa31sc49G50 Aethionema arabicum HOM05D004324 ORTHO05D004840 5.7e-08 62.8 50 66.0
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 2.8e-07 60.5 42 64.3


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