Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002108 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 6.0e-279 963.8 567 100.0
CSS0007027 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 3.9e-262 907.9 567 94.9
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 1.0e-68 265.4 432 46.3
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 2.2e-63 247.7 455 43.5
vmacro06681 Vaccinium macrocarpon HOM05D004189 ORTHO05D004092 5.9e-61 239.6 464 41.6
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 5.4e-54 216.5 345 45.8
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 2.5e-51 207.6 566 35.9
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 1.6e-50 204.9 596 37.1
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 5.2e-49 199.9 351 41.3
Dinv28441 Davidia involucrata HOM05D004189 ORTHO05D004092 6.8e-49 199.5 585 39.0
QL09p014192 Quercus lobata HOM05D004189 ORTHO05D004092 1.2e-48 198.7 338 45.0
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 1.2e-48 198.7 354 40.4
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 3.4e-48 197.2 479 37.6
Duzib205G0656 Durio zibethinus HOM05D004189 ORTHO05D004092 5.8e-48 196.4 494 34.4
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 1.3e-47 195.3 368 41.8
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 2.9e-47 194.1 479 36.5
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 3.7e-47 193.7 361 40.2
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 4.9e-47 193.4 375 38.9
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 6.4e-47 193.0 479 36.3
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 1.9e-46 191.4 432 37.5
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 3.2e-46 190.7 402 37.3
CAN.G490.32 Capsicum annuum HOM05D004189 ORTHO05D004092 4.6e-45 186.8 357 39.8
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 8.6e-44 182.6 556 33.8
QL09p014207 Quercus lobata HOM05D004189 ORTHO05D004092 2.5e-43 181.0 338 43.2
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 6.8e-41 172.9 510 33.9
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 1.5e-40 171.8 369 37.4
Thecc.03G176700 Theobroma cacao HOM05D004189 ORTHO05D004092 3.4e-40 170.6 322 39.8
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 5.4e-38 163.3 466 33.7
Lj8A24G36 Lonicera japonica HOM05D004189 ORTHO05D004092 3.9e-36 157.1 338 38.8
DCAR_018199 Daucus carota HOM05D004189 ORTHO05D004092 3.3e-35 154.1 662 35.0
Rhsim03G0180900 Rhododendron simsii HOM05D004189 ORTHO05D004092 5.6e-35 153.3 335 38.5
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 7.3e-35 152.9 369 37.7
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 9.6e-35 152.5 368 37.2
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 1.2e-34 152.1 387 35.7
ECA238G1803 Erigeron canadensis HOM05D004189 ORTHO05D004092 2.8e-34 151.0 458 33.2
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 4.7e-34 150.2 533 32.3
FAN03G0716 Fragaria x ananassa HOM05D013146 ORTHO05D004092 6.8e-33 146.4 366 36.6
RcHm_v2.0_Chr1g0377331 Rosa chinensis HOM05D013146 ORTHO05D004092 2.0e-32 144.8 405 36.3
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 4.9e-31 140.2 307 38.8
THA.LOC104811978 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 9.3e-30 136.0 476 30.7
arahy.Tifrunner.gnm1.ann1.E2ZRS1 Arachis hypogaea HOM05D004189 ORTHO05D004092 4.6e-29 133.7 593 27.8
FAN10G2986 Fragaria x ananassa HOM05D013146 ORTHO05D004092 7.8e-29 132.9 352 36.1
Lsat_1_v5_gn_8_8621 Lactuca sativa HOM05D004189 ORTHO05D004092 1.0e-28 132.5 397 32.5
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 3.9e-28 130.6 348 35.9
Migut.F01119 Erythranthe guttata HOM05D004189 ORTHO05D004092 6.6e-28 129.8 453 33.8
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 1.5e-27 128.6 386 31.1
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 4.3e-27 127.1 395 33.2
Potri.015G143950 Populus trichocarpa HOM05D004189 ORTHO05D004092 1.3e-26 125.6 553 30.2
arahy.Tifrunner.gnm1.ann1.EQ3RBX Arachis hypogaea HOM05D004189 ORTHO05D004092 1.6e-26 125.2 606 27.1
ECA233G5127 Erigeron canadensis HOM05D004189 ORTHO05D004092 3.6e-26 124.0 294 33.7
Migut.F00339 Erythranthe guttata HOM05D004189 ORTHO05D004092 3.6e-26 124.0 436 29.8
HanXRQChr07g0207021 Helianthus annuus HOM05D004189 ORTHO05D004092 4.8e-26 123.6 485 30.5
AUR62021191 Chenopodium quinoa HOM05D004189 ORTHO05D004092 8.1e-26 122.9 439 32.1
Sc19g0001510 Simmondsia chinensis HOM05D004189 ORTHO05D004092 3.1e-25 120.9 427 32.8
PGR042G0303 Punica granatum HOM05D004189 ORTHO05D004092 6.9e-25 119.8 556 27.3
EL10Ac3g05642 Beta vulgaris HOM05D004189 ORTHO05D004092 1.2e-24 119.0 410 32.7
AUR62015982 Chenopodium quinoa HOM05D004189 ORTHO05D004092 2.0e-24 118.2 453 31.1
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 2.6e-24 117.9 244 41.0
FAN06G2021 Fragaria x ananassa HOM05D013146 ORTHO05D004092 4.4e-24 117.1 347 32.0
FAN10G2376 Fragaria x ananassa HOM05D013146 ORTHO05D004092 4.4e-24 117.1 358 34.4
FAN06G1386 Fragaria x ananassa HOM05D013146 ORTHO05D004092 5.8e-24 116.7 504 29.2
Lsat_1_v5_gn_2_132020 Lactuca sativa HOM05D004189 ORTHO05D004092 7.6e-24 116.3 487 29.2
Glyma.20G158500 Glycine max HOM05D004189 ORTHO05D004092 1.3e-23 115.5 445 29.2
THA.LOC104800253 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 1.3e-23 115.5 342 33.9
Aqoxy7G00356 Aquilegia oxysepala HOM05D004189 ORTHO05D004092 4.9e-23 113.6 489 30.5
AL8G26690 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 2.4e-22 111.3 471 29.7
Hund11746 Selenicereus undatus HOM05D004189 ORTHO05D004092 7.1e-22 109.8 341 31.7
Glyma.16G193200 Glycine max HOM05D004189 ORTHO05D004092 9.3e-22 109.4 289 38.1
Nn1g01463 Nelumbo nucifera HOM05D004189 ORTHO05D004092 2.1e-21 108.2 305 36.4
BcaC03g14545 Brassica carinata HOM05D004189 ORTHO05D004092 3.5e-21 107.5 401 29.7
TPR.G10757 Trifolium pratense HOM05D004189 ORTHO05D004092 3.5e-21 107.5 222 44.6
BcaB05g21946 Brassica carinata HOM05D004189 ORTHO05D004092 4.6e-21 107.1 460 28.9
CiPaw.03G106300 Carya illinoinensis HOM05D004189 ORTHO05D004092 6.0e-21 106.7 272 36.8
PSO782G0005 Papaver somniferum HOM05D004189 ORTHO05D004092 1.3e-20 105.5 507 29.8
AT5G52300 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 3.9e-20 104.0 498 27.5
C02p19900 Brassica napus HOM05D004189 ORTHO05D004092 5.1e-20 103.6 403 29.5
BolC2t08123H Brassica oleracea HOM05D004189 ORTHO05D004092 5.1e-20 103.6 403 29.5
FvH4_7g29491 Fragaria vesca HOM05D013146 ORTHO05D004092 5.1e-20 103.6 315 34.3
Carub.0007s1540 Capsella rubella HOM05D004189 ORTHO05D004092 8.7e-20 102.8 382 32.7
Thhalv10013021m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 8.7e-20 102.8 466 28.3
BcaC06g32799 Brassica carinata HOM05D004189 ORTHO05D004092 1.1e-19 102.4 372 31.5
C07p54440 Brassica napus HOM05D004189 ORTHO05D004092 1.1e-19 102.4 392 32.1
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 1.9e-19 101.7 330 34.5
GSVIVG01028976001 Vitis vinifera HOM05D004189 ORTHO05D004092 1.9e-19 101.7 194 40.2
BolC7t45929H Brassica oleracea HOM05D004189 ORTHO05D004092 3.3e-19 100.9 375 32.0
CANSAT21G0752 Cannabis sativa HOM05D004189 ORTHO05D004092 4.3e-19 100.5 405 29.4
CARHR265280 Cardamine hirsuta HOM05D004189 ORTHO05D004092 7.4e-19 99.8 348 29.9
Sp7g23610 Schrenkiella parvula HOM05D004189 ORTHO05D004092 1.6e-18 98.6 376 29.3
Aa31LG7G12260 Aethionema arabicum HOM05D004189 ORTHO05D004092 2.1e-18 98.2 472 26.7
MD07G1268800 Malus domestica HOM05D004189 ORTHO05D004092 2.1e-18 98.2 426 29.6
A02p11900 Brassica napus HOM05D004189 ORTHO05D004092 2.8e-18 97.8 425 29.4
A03p56110 Brassica napus HOM05D004189 ORTHO05D004092 2.8e-18 97.8 382 30.6
CANSAT21G0725 Cannabis sativa HOM05D004189 ORTHO05D004092 2.8e-18 97.8 405 29.1
ClCG09G012920 Citrullus lanatus HOM05D004189 ORTHO05D004092 4.8e-18 97.1 411 28.0
BraA03t14684Z Brassica rapa HOM05D004189 ORTHO05D004092 8.1e-18 96.3 390 29.2
CARHR233000 Cardamine hirsuta HOM05D004189 ORTHO05D004092 8.1e-18 96.3 343 30.3
Glyma.16G189900 Glycine max HOM05D004189 ORTHO05D004092 8.1e-18 96.3 237 37.6
AT4G25580 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 1.8e-17 95.1 427 29.3
PSO478G0985 Papaver somniferum HOM05D004189 ORTHO05D004092 1.8e-17 95.1 546 26.7
Lj5g0019959 Lotus japonicus HOM05D004189 ORTHO05D004092 2.4e-17 94.7 361 31.3
MBI18_g30543_MAGBIO Magnolia biondii HOM05D004189 ORTHO05D004092 2.4e-17 94.7 406 30.8
HanXRQChr06g0183811 Helianthus annuus HOM05D004189 ORTHO05D004092 3.1e-17 94.4 293 31.4
Phvul.007G069800 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 6.9e-17 93.2 385 29.6
Medtr1g100627 Medicago truncatula HOM05D004189 ORTHO05D004092 9.0e-17 92.8 423 27.9
CDE08G1026 Ceratophyllum demersum HOM05D004189 ORTHO05D004092 1.2e-16 92.4 318 28.9
Carub.0008s1240 Capsella rubella HOM05D004189 ORTHO05D004092 1.5e-16 92.0 564 25.4
MELO3C003321.2 Cucumis melo HOM05D004189 ORTHO05D004092 3.4e-16 90.9 413 28.3
Glyma.10G236000 Glycine max HOM05D004189 ORTHO05D004092 3.4e-16 90.9 439 27.8
Oeu056256.2 Olea europaea HOM05D004189 ORTHO05D004092 3.4e-16 90.9 254 34.3
Sp6g14560 Schrenkiella parvula HOM05D004189 ORTHO05D004092 3.4e-16 90.9 229 36.2
Thhalv10024860m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 7.6e-16 89.7 369 29.8
Glyma.09G139600 Glycine max HOM05D004189 ORTHO05D004092 2.2e-15 88.2 235 35.3
Ca_10770_v3 Cicer arietinum L. HOM05D004189 ORTHO05D004092 2.9e-15 87.8 390 27.4
TPR.G14322 Trifolium pratense HOM05D004189 ORTHO05D004092 3.8e-15 87.4 311 30.9
Ca_25745_v3 Cicer arietinum L. HOM05D004189 ORTHO05D004092 1.1e-14 85.9 264 35.6
BcaC01g06182 Brassica carinata HOM05D004189 ORTHO05D004092 1.4e-14 85.5 483 26.7
VMungo0720G0841 Vigna mungo HOM05D004189 ORTHO05D004092 1.4e-14 85.5 439 26.7
A03p15730 Brassica napus HOM05D004189 ORTHO05D004092 1.9e-14 85.1 485 25.8
unitig_46.g18790 Utricularia gibba HOM05D004189 ORTHO05D004092 2.4e-14 84.7 313 28.8
BraA03t10863Z Brassica rapa HOM05D004189 ORTHO05D004092 4.2e-14 84.0 484 26.2
FAN06G3443 Fragaria x ananassa HOM05D013146 ORTHO05D004092 4.2e-14 84.0 159 42.1
PSO478G2886 Papaver somniferum HOM05D064671 ORTHO05D004092 4.2e-14 84.0 311 31.5
Lj2g0010006 Lotus japonicus HOM05D004189 ORTHO05D004092 7.1e-14 83.2 232 35.3
Aa31LG3G8720 Aethionema arabicum HOM05D004189 ORTHO05D004092 9.3e-14 82.8 160 42.5
FvH4_7g29480 Fragaria vesca HOM05D013146 ORTHO05D004092 1.6e-13 82.0 159 41.5
arahy.Tifrunner.gnm1.ann1.UM41MD Arachis hypogaea HOM05D004189 ORTHO05D004092 6.0e-13 80.1 192 35.9
BcaB01g04200 Brassica carinata HOM05D004189 ORTHO05D004092 6.0e-13 80.1 491 25.7
ATR0680G076 Amborella trichopoda HOM05D004189 ORTHO05D004092 1.3e-12 79.0 408 26.2
arahy.Tifrunner.gnm1.ann1.06RI6S Arachis hypogaea HOM05D004189 ORTHO05D004092 1.3e-12 79.0 410 25.4
Ah.07g207200 Amaranthus hybridus HOM05D032681 ORTHO05D004092 1.8e-12 78.6 389 28.8
PSO782G3516 Papaver somniferum HOM05D064671 ORTHO05D004092 3.0e-12 77.8 310 30.6
AL7G27520 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 8.7e-12 76.3 259 30.9
arahy.Tifrunner.gnm1.ann1.4R9DEN Arachis hypogaea HOM05D001888 ORTHO05D001842 1.9e-11 75.1 300 28.7
PSO782G3290 Papaver somniferum HOM05D057890 ORTHO05D004092 1.9e-11 75.1 249 34.1
C03p18370 Brassica napus HOM05D004189 ORTHO05D004092 1.6e-10 72.0 459 26.4
SGA_v2.0_scaffold10G05341 Striga asiatica HOM05D026728 ORTHO05D004092 3.7e-10 70.9 161 34.2
Sed0019460 Sechium edule HOM05D004189 ORTHO05D004092 6.2e-10 70.1 412 26.7
PSO478G0660 Papaver somniferum HOM05D057890 ORTHO05D004092 2.4e-09 68.2 242 33.9
CsaV3_3G049950 Cucumis sativus L. HOM05D004189 ORTHO05D004092 3.1e-09 67.8 203 33.5
Psat0s2227g0040 Pisum sativum HOM05D004189 ORTHO05D004092 3.1e-09 67.8 136 38.2
BolC3t14234H Brassica oleracea HOM05D004189 ORTHO05D004092 9.0e-09 66.2 476 25.0
Medtr6g045273 Medicago truncatula HOM05D004189 ORTHO05D004092 9.0e-09 66.2 195 34.9
Peaxi162Scf00234g00811 Petunia axillaris HOM05D004189 ORTHO05D004092 1.2e-08 65.9 132 39.4
Psat6g199400 Pisum sativum HOM05D004189 ORTHO05D004092 1.7e-07 62.0 341 25.5
Glyma.16G192000 Glycine max HOM05D004189 ORTHO05D004092 2.2e-07 61.6 122 39.3
Nitab4.5_0003242g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 2.2e-07 61.6 110 42.7
Phvul.004G117100 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 3.8e-07 60.8 175 31.4
Glyma.16G183700 Glycine max HOM05D004189 ORTHO05D004092 6.5e-07 60.1 132 37.9
Glyma.16G192200 Glycine max HOM05D004189 ORTHO05D004092 1.9e-06 58.5 122 38.5
Glyma.16G192732 Glycine max HOM05D004189 ORTHO05D004092 1.9e-06 58.5 132 37.1
ECA238G1893 Erigeron canadensis HOM05D004189 ORTHO05D004092 2.5e-06 58.2 167 29.3
Sp6g14580 Schrenkiella parvula HOM05D004189 ORTHO05D004092 3.2e-06 57.8 180 31.7
Hund04742 Selenicereus undatus HOM05D004189 ORTHO05D004092 7.1e-06 56.6 172 33.7
AL271U10030 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 9.3e-06 56.2 225 32.0


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