Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 1.0e-232 809.7 402 100.0
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 3.9e-232 807.7 402 99.8
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 4.3e-199 698.0 403 86.1
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 1.6e-190 669.5 411 78.8
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 4.5e-180 634.8 413 76.5
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 5.9e-180 634.4 413 76.5
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 7.7e-180 634.0 413 76.5
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 3.2e-178 628.6 411 75.2
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 3.0e-176 622.1 410 74.6
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 3.9e-176 621.7 410 74.6
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 2.6e-175 619.0 412 76.0
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.9e-171 605.5 416 74.8
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 5.0e-171 604.7 410 72.7
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 6.5e-171 604.4 410 72.4
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 8.5e-171 604.0 417 74.8
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.5e-170 603.2 414 74.9
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 1.5e-170 603.2 412 74.0
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 4.2e-170 601.7 410 74.6
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 7.2e-170 600.9 417 70.7
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.1e-169 599.4 416 74.3
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 3.6e-169 598.6 413 74.1
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 8.0e-169 597.4 417 72.7
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 1.8e-168 596.3 417 72.2
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 6.7e-168 594.3 422 73.7
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.5e-167 593.2 440 71.1
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 3.3e-167 592.0 419 72.3
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 5.7e-167 591.3 405 73.1
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 5.7e-167 591.3 422 74.2
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 1.7e-166 589.7 418 71.8
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 3.7e-166 588.6 422 73.0
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 3.7e-166 588.6 417 72.4
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 8.2e-166 587.4 398 75.9
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 2.4e-165 585.9 422 72.5
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 9.1e-165 583.9 422 72.7
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 9.1e-165 583.9 422 72.5
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 3.5e-164 582.0 410 72.4
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 1.3e-163 580.1 429 68.1
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 6.5e-163 577.8 413 70.9
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 1.9e-162 576.2 407 72.5
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 1.9e-162 576.2 404 70.0
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 2.7e-161 572.4 405 71.6
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 3.6e-161 572.0 418 69.6
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 4.7e-161 571.6 405 70.4
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 1.8e-160 569.7 406 70.7
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 2.3e-160 569.3 402 71.9
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 5.2e-160 568.2 410 72.0
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 1.5e-159 566.6 410 71.5
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 6.3e-158 561.2 405 69.4
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.1e-157 560.5 405 72.3
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 1.4e-157 560.1 415 68.9
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 3.1e-157 558.9 401 71.3
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 4.1e-157 558.5 405 68.4
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 9.1e-157 557.4 416 67.8
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.2e-156 557.0 415 67.7
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 1.6e-156 556.6 406 68.5
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 2.5e-154 549.3 405 69.1
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 2.3e-152 542.7 407 67.6
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 5.2e-152 541.6 402 68.4
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 1.5e-151 540.0 415 68.4
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 3.4e-151 538.9 405 67.7
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 1.3e-150 537.0 402 69.2
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 1.3e-150 537.0 402 69.2
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 6.3e-150 534.6 402 68.9
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 1.1e-149 533.9 415 66.7
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 1.1e-149 533.9 403 68.0
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 5.4e-149 531.6 404 68.6
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 2.0e-148 529.6 372 70.2
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 5.9e-148 528.1 415 64.8
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 1.3e-147 526.9 416 65.1
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 1.3e-147 526.9 416 65.4
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 1.3e-147 526.9 414 65.5
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 1.7e-147 526.6 415 65.1
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 2.3e-147 526.2 415 65.3
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 2.5e-146 522.7 415 65.1
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 4.3e-146 521.9 397 69.0
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 1.6e-145 520.0 400 69.0
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 8.0e-145 517.7 400 67.5
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 1.8e-144 516.5 403 67.5
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 2.3e-144 516.2 416 64.7
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 3.0e-144 515.8 415 64.8
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 3.0e-144 515.8 415 64.8
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 3.0e-144 515.8 415 64.8
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 3.0e-144 515.8 416 64.7
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 8.9e-144 514.2 414 64.3
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 1.2e-143 513.8 415 64.3
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 4.4e-143 511.9 414 64.7
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 5.7e-143 511.5 410 65.4
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 2.2e-142 509.6 414 64.0
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 7.0e-141 504.6 404 66.8
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 3.0e-139 499.2 476 58.8
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 1.1e-138 497.3 399 64.9
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 2.6e-135 486.1 402 63.9
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 5.8e-135 485.0 360 69.4
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 1.3e-134 483.8 399 64.7
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 3.9e-123 445.7 402 60.0
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 5.2e-120 435.3 461 50.5
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 1.9e-117 426.8 269 79.2
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 4.1e-117 425.6 255 82.4
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 2.2e-110 403.3 254 80.7
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 4.6e-108 395.6 291 72.9
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 5.3e-104 382.1 244 78.7
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 9.0e-104 381.3 464 46.6
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 7.9e-100 368.2 245 77.6
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 3.0e-99 366.3 413 49.6
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 4.9e-94 349.0 461 44.7
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 1.9e-93 347.1 410 49.0
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 3.4e-87 326.2 310 58.1
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 5.0e-78 295.8 435 41.4
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 3.1e-72 276.6 182 75.8
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 7.7e-47 192.2 172 54.1
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 3.8e-38 163.3 192 50.0
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 3.6e-36 156.8 492 25.6
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 3.6e-36 156.8 168 51.8
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 1.4e-35 154.8 473 27.7
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 2.8e-33 147.1 151 53.0
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 1.6e-31 141.4 438 28.8
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 1.3e-22 111.7 70 80.0
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 3.9e-22 110.2 108 50.9
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 5.0e-22 109.8 98 61.2
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 6.4e-17 92.8 125 45.6


User provided reference genes

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