Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001411 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 5.1e-20 100.1 51 100.0
CSS0010727 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 2.2e-15 84.7 80 63.8
Atru.chr7.1631 Acer truncatum HOM05D001027 ORTHO05D000844 3.2e-06 54.3 27 92.6
Actinidia39707 Actinidia chinensis HOM05D001027 ORTHO05D000844 3.2e-06 54.3 27 92.6
CSS0030254 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 3.2e-06 54.3 27 92.6
Cfa003055 Carpinus fangiana HOM05D001027 ORTHO05D000844 3.2e-06 54.3 36 72.2
Haze_25941 Corylus avellana HOM05D001027 ORTHO05D000844 3.2e-06 54.3 36 72.2
Dinv42342 Davidia involucrata HOM05D001027 ORTHO05D000844 3.2e-06 54.3 27 92.6
Hma1.2p1_0672F.1_g200980 Hydrangea macrophylla HOM05D001027 ORTHO05D000844 3.2e-06 54.3 27 92.6
Potri.006G147400 Populus trichocarpa HOM05D001027 ORTHO05D000844 3.2e-06 54.3 27 92.6
QL02p062075 Quercus lobata HOM05D001027 ORTHO05D000844 3.2e-06 54.3 36 72.2
Sabra18G0058800 Salix brachista HOM05D001027 ORTHO05D000844 3.2e-06 54.3 27 92.6
SabraUnG0005200 Salix brachista HOM05D001027 ORTHO05D000844 3.2e-06 54.3 27 92.6
TAR624G1250 Trochodendron aralioides HOM05D001027 ORTHO05D000844 3.2e-06 54.3 27 92.6
GSVIVG01015170001 Vitis vinifera HOM05D001027 ORTHO05D000844 3.2e-06 54.3 27 92.6
CiPaw.04G147800 Carya illinoinensis HOM05D001027 ORTHO05D000844 4.2e-06 53.9 36 72.2
Ciclev10009173m.g Citrus clementina HOM05D001027 ORTHO05D000844 4.2e-06 53.9 27 92.6
DCAR_010506 Daucus carota HOM05D001027 ORTHO05D000844 4.2e-06 53.9 27 92.6
ECA234G4183 Erigeron canadensis HOM05D001027 ORTHO05D000844 4.2e-06 53.9 27 92.6
HanXRQChr10g0319501 Helianthus annuus HOM05D001027 ORTHO05D000844 4.2e-06 53.9 27 92.6
Lsat_1_v5_gn_5_143181 Lactuca sativa HOM05D001027 ORTHO05D000844 4.2e-06 53.9 27 92.6
Lj4A291T50 Lonicera japonica HOM05D001027 ORTHO05D000844 4.2e-06 53.9 27 92.6
PGR142G1838 Punica granatum HOM05D001027 ORTHO05D000844 4.2e-06 53.9 36 72.2
Rhsim05G0016500 Rhododendron simsii HOM05D001027 ORTHO05D000844 4.2e-06 53.9 27 92.6
vmacro17140 Vaccinium macrocarpon HOM05D001027 ORTHO05D000844 4.2e-06 53.9 27 92.6
MSTRG.22565 Avicennia marina HOM05D001027 ORTHO05D000844 5.4e-06 53.5 36 72.2
Eucgr.C00865 Eucalyptus grandis HOM05D001027 ORTHO05D000844 5.4e-06 53.5 36 72.2
Actinidia26042 Actinidia chinensis HOM05D001027 ORTHO05D000844 7.1e-06 53.1 27 88.9
Actinidia39094 Actinidia chinensis HOM05D001027 ORTHO05D000844 7.1e-06 53.1 27 88.9
Manes.16G099700 Manihot esculenta HOM05D001027 ORTHO05D000844 7.1e-06 53.1 27 88.9
Oeu055350.2 Olea europaea HOM05D001027 ORTHO05D000844 7.1e-06 53.1 27 88.9
FvH4_1g07940 Fragaria vesca HOM05D001027 ORTHO05D000844 9.3e-06 52.8 36 69.4
FAN19G0620 Fragaria x ananassa HOM05D001027 ORTHO05D000844 9.3e-06 52.8 36 69.4
FAN23G0537 Fragaria x ananassa HOM05D001027 ORTHO05D000844 9.3e-06 52.8 36 69.4
FAN26G1071 Fragaria x ananassa HOM05D001027 ORTHO05D000844 9.3e-06 52.8 36 69.4
FAN26G3240 Fragaria x ananassa HOM05D001027 ORTHO05D000844 9.3e-06 52.8 36 69.4
FAN28G1607 Fragaria x ananassa HOM05D000250 ORTHO05D000625 9.3e-06 52.8 36 69.4
Prupe.7G205700 Prunus persica HOM05D001027 ORTHO05D000844 9.3e-06 52.8 36 69.4
RcHm_v2.0_Chr2g0093821 Rosa chinensis HOM05D001027 ORTHO05D000844 9.3e-06 52.8 36 69.4
SGA_v2.0_scaffold21G09416 Striga asiatica HOM05D001027 ORTHO05D000844 9.3e-06 52.8 49 55.1
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 9.3e-06 52.8 49 55.1
TWI34G0703 Tripterygium wilfordii HOM05D001027 ORTHO05D000844 9.3e-06 52.8 27 92.6


User provided reference genes

Program Settings