Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.8e-135 487.3 239 100.0
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.9e-105 387.5 193 96.9
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 5.7e-89 332.8 191 82.7
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 3.0e-82 310.5 192 78.1
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 3.3e-81 307.0 221 70.6
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 1.3e-80 305.1 168 87.5
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 1.4e-79 301.6 213 71.4
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 4.5e-78 296.6 192 74.5
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 1.2e-75 288.5 192 70.8
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 2.1e-75 287.7 191 72.8
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 2.7e-75 287.3 188 72.3
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 4.7e-75 286.6 196 69.4
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 4.7e-75 286.6 176 75.6
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 6.1e-75 286.2 192 71.4
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 6.1e-75 286.2 193 69.9
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 5.2e-74 283.1 193 70.5
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 1.1e-73 282.0 192 70.3
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 1.5e-73 281.6 191 69.6
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 1.5e-73 281.6 193 71.5
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 9.7e-73 278.9 207 65.7
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 1.3e-72 278.5 193 70.5
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 2.2e-72 277.7 193 67.4
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 2.2e-72 277.7 192 67.7
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 8.2e-72 275.8 192 69.3
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 8.2e-72 275.8 197 67.0
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.4e-71 275.0 199 70.4
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 1.4e-71 275.0 193 67.9
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 1.8e-71 274.6 200 67.5
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 4.1e-71 273.5 197 65.5
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 5.3e-71 273.1 194 68.6
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 9.1e-71 272.3 192 69.3
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 1.6e-70 271.6 218 60.6
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 1.6e-70 271.6 194 68.0
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 7.7e-70 269.2 196 68.4
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 7.7e-70 269.2 197 62.4
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 1.3e-69 268.5 200 64.0
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 1.1e-68 265.4 169 72.8
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 2.5e-68 264.2 191 64.4
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 2.5e-68 264.2 168 74.4
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 4.2e-68 263.5 196 64.8
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 7.2e-68 262.7 169 71.6
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 1.2e-67 261.9 187 66.3
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 1.2e-67 261.9 201 64.7
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 3.6e-67 260.4 192 66.7
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 1.4e-66 258.5 191 63.4
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 1.4e-66 258.5 225 60.4
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 1.8e-66 258.1 193 65.8
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 8.8e-66 255.8 188 62.2
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 1.2e-65 255.4 188 63.3
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 1.5e-65 255.0 187 64.7
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 2.6e-65 254.2 187 63.1
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 4.4e-65 253.4 192 64.1
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 5.7e-65 253.1 169 71.6
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 1.3e-64 251.9 195 60.5
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 6.3e-64 249.6 183 64.5
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 6.3e-64 249.6 212 57.5
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 1.1e-63 248.8 158 71.5
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 1.4e-63 248.4 182 64.3
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 2.4e-63 247.7 191 59.7
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 5.3e-63 246.5 183 60.1
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 2.7e-62 244.2 161 68.9
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 3.5e-62 243.8 187 63.1
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 1.7e-61 241.5 187 62.0
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 2.9e-61 240.7 230 54.3
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 3.8e-61 240.4 194 60.3
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 3.8e-61 240.4 217 53.9
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 6.5e-61 239.6 194 60.3
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 1.5e-60 238.4 205 57.1
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 1.9e-60 238.0 195 59.5
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 3.2e-60 237.3 193 60.1
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 4.2e-60 236.9 168 67.3
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 4.2e-60 236.9 161 66.5
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 5.5e-60 236.5 192 59.4
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 9.4e-60 235.7 192 59.9
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 1.2e-59 235.3 192 59.4
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 1.6e-59 235.0 130 83.1
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 1.6e-59 235.0 193 58.5
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 3.6e-59 233.8 188 60.1
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.4e-58 231.9 165 71.5
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 3.0e-58 230.7 192 59.9
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 7.5e-57 226.1 206 57.3
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 2.7e-54 217.6 183 59.0
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 3.5e-54 217.2 131 77.9
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 5.9e-54 216.5 192 57.8
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 6.5e-53 213.0 213 50.2
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.1e-52 212.2 137 70.8
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 1.5e-52 211.8 153 64.7
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 3.0e-50 204.1 187 54.5
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.5e-46 190.7 183 53.0
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 1.9e-44 184.9 138 65.2
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 2.0e-41 174.9 158 55.1
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 3.3e-36 157.5 178 50.6
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 2.4e-31 141.4 130 54.6
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 4.1e-31 140.6 111 58.6
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 1.6e-27 128.6 75 76.0
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.9e-24 117.9 54 96.3
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 2.7e-22 111.3 131 38.9
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 2.3e-21 108.2 128 37.5
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 1.1e-20 105.9 135 36.3
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 1.1e-18 99.4 54 81.5
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 2.4e-18 98.2 56 78.6
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 4.0e-18 97.4 140 35.7
CSS0030347 Camellia sinensis var. sinensis HOM05D002397 ORTHO05D002667 5.8e-17 93.6 49 98.0
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 7.6e-17 93.2 112 45.5
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 3.2e-15 87.8 165 33.3
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 2.1e-14 85.1 67 61.2
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 2.3e-13 81.6 113 46.0
CSS0001056 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.1e-11 75.1 38 100.0
CSS0048441 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.1e-11 75.1 38 100.0
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 8.1e-11 73.2 193 31.1
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 3.4e-09 67.8 38 76.3
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 9.9e-09 66.2 40 70.0
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 8.4e-08 63.2 42 64.3
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.4e-07 62.4 50 52.0
Haze_06062 Corylus avellana HOM05D006866 ORTHO05D008689 1.2e-06 59.3 35 74.3
Lj5g0020884 Lotus japonicus HOM05D000132 ORTHO05D000058 6.0e-06 57.0 35 77.1


User provided reference genes

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