Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001056 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.4e-44 182.6 89 100.0
CSS0048441 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.4e-44 182.6 89 100.0
EL10Ac8g19311 Beta vulgaris HOM05D006866 ORTHO05D008689 7.2e-30 133.7 74 78.4
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 4.7e-29 131.0 76 76.3
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 6.1e-29 130.6 77 74.0
MD05G1251100 Malus domestica HOM05D006866 ORTHO05D008689 1.8e-28 129.0 87 71.3
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 1.2e-27 126.3 81 67.9
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 5.7e-27 124.0 80 70.0
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 1.1e-25 119.8 80 63.8
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 1.1e-22 109.8 65 78.5
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 3.2e-22 108.2 58 82.8
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 2.1e-21 105.5 77 70.1
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 4.0e-20 101.3 82 57.3
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 4.4e-19 97.8 54 81.5
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 4.1e-17 91.3 48 87.5
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 7.0e-17 90.5 52 80.8
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 3.5e-16 88.2 46 87.0
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 2.3e-15 85.5 46 84.8
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 5.0e-15 84.3 46 82.6
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 6.6e-15 84.0 47 78.7
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 1.1e-14 83.2 47 80.9
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 1.5e-14 82.8 47 80.9
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 1.5e-14 82.8 41 92.7
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 1.5e-14 82.8 41 92.7
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 1.5e-14 82.8 41 92.7
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 1.9e-14 82.4 42 88.1
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 2.5e-14 82.0 46 82.6
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 5.5e-14 80.9 41 87.8
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 5.5e-14 80.9 41 87.8
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 5.5e-14 80.9 77 42.9
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 7.2e-14 80.5 42 88.1
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 1.2e-13 79.7 43 86.0
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 2.8e-13 78.6 46 76.1
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 2.8e-13 78.6 46 73.9
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 2.8e-13 78.6 46 71.7
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 3.6e-13 78.2 43 79.1
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 3.6e-13 78.2 45 73.3
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 4.7e-13 77.8 46 73.9
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 1.0e-12 76.6 45 77.8
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 1.0e-12 76.6 40 87.5
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 1.4e-12 76.3 41 87.8
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.3e-12 75.5 38 100.0
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 4.0e-12 74.7 43 76.7
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 2.0e-11 72.4 41 80.5
Haze_06062 Corylus avellana HOM05D006866 ORTHO05D008689 5.7e-11 70.9 40 75.0
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 2.2e-10 68.9 38 81.6
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 3.7e-10 68.2 37 78.4
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 3.7e-10 68.2 39 74.4
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 8.3e-10 67.0 41 70.7
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 8.3e-10 67.0 38 86.8
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 1.4e-09 66.2 37 83.8
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 1.8e-09 65.9 39 74.4
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 1.8e-09 65.9 38 84.2
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 2.4e-09 65.5 36 83.3
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 2.4e-09 65.5 38 81.6
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 2.4e-09 65.5 36 83.3
Lj5g0020884 Lotus japonicus HOM05D000132 ORTHO05D000058 3.1e-09 65.1 38 78.9
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 3.1e-09 65.1 36 83.3
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 4.1e-09 64.7 39 71.8
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 4.1e-09 64.7 39 71.8
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 7.0e-09 63.9 36 80.6
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 1.2e-08 63.2 38 76.3
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 2.7e-08 62.0 37 73.0
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 2.7e-08 62.0 35 85.7
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 1.0e-07 60.1 35 77.1
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 1.3e-07 59.7 35 77.1
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 1.7e-07 59.3 35 74.3
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 1.7e-07 59.3 35 74.3
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 1.7e-07 59.3 36 75.0
COL.COLO4_18568 Corchorus olitorius HOM05D000001 ORTHO05D013582 3.9e-07 58.2 80 38.8
AagrBONN_evm.TU.Sc2ySwM_344.1011 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.6e-07 57.0 69 39.1
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 8.6e-07 57.0 30 80.0
TWI75G0181 Tripterygium wilfordii HOM05D000001 ORTHO05D009961 8.6e-07 57.0 56 37.5
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 1.1e-06 56.6 36 72.2
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 1.1e-06 56.6 32 78.1
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 1.1e-06 56.6 30 90.0
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 1.9e-06 55.8 34 73.5
AagrBONN_evm.TU.Sc2ySwM_344.531 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.9e-06 55.8 65 41.5
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 1.9e-06 55.8 34 73.5
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 1.9e-06 55.8 30 80.0
Nn6g34129 Nelumbo nucifera HOM05D000001 ORTHO05D000003 1.9e-06 55.8 76 38.2
AagrBONN_evm.TU.Sc2ySwM_228.5559 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.5e-06 55.5 68 36.8
Duzib168G0340 Durio zibethinus HOM05D000001 ORTHO05D013582 3.3e-06 55.1 80 37.5
Gohir.A09G022400 Gossypium hirsutum HOM05D000001 ORTHO05D000003 3.3e-06 55.1 62 45.2
Gorai.006G025600 Gossypium raimondii HOM05D000001 ORTHO05D000003 3.3e-06 55.1 62 45.2
Phvul.007G081500 Phaseolus vulgaris HOM05D000001 ORTHO05D009961 3.3e-06 55.1 76 32.9
Gohir.D05G094000 Gossypium hirsutum HOM05D000001 ORTHO05D013582 4.3e-06 54.7 84 36.9
Gorai.009G097000 Gossypium raimondii HOM05D000001 ORTHO05D013582 4.3e-06 54.7 84 36.9
Lj2g0024822 Lotus japonicus HOM05D000001 ORTHO05D010008 4.3e-06 54.7 66 39.4
Phvul.009G001901 Phaseolus vulgaris HOM05D000001 ORTHO05D009961 4.3e-06 54.7 76 32.9
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 5.6e-06 54.3 49 36.7
Lalb_Chr10g0098021 Lupinus albus HOM05D000001 ORTHO05D010008 5.6e-06 54.3 66 36.4
Oeu023978.1 Olea europaea HOM05D000001 ORTHO05D009488 5.6e-06 54.3 69 36.2
Potri.014G087100 Populus trichocarpa HOM05D000001 ORTHO05D000003 5.6e-06 54.3 51 49.0
RcHm_v2.0_Chr6g0268571 Rosa chinensis HOM05D000001 ORTHO05D009961 5.6e-06 54.3 73 38.4
AagrBONN_evm.TU.Sc2ySwM_368.3181 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.3e-06 53.9 68 33.8
Ca_15327_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009961 7.3e-06 53.9 73 31.5
Gohir.D09G021600 Gossypium hirsutum HOM05D000001 ORTHO05D000003 7.3e-06 53.9 62 45.2
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 7.3e-06 53.9 30 83.3
AagrBONN_evm.TU.Sc2ySwM_344.2113 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.5e-06 53.5 57 35.1
CAN.G623.71 Capsicum annuum HOM05D000001 ORTHO05D011563 9.5e-06 53.5 57 43.9
CAN.G905.17 Capsicum annuum HOM05D000001 ORTHO05D000003 9.5e-06 53.5 82 35.4
Migut.G00366 Erythranthe guttata HOM05D000001 ORTHO05D000003 9.5e-06 53.5 76 36.8
Lalb_Chr11g0061281 Lupinus albus HOM05D000001 ORTHO05D009961 9.5e-06 53.5 73 30.1
Oeu002959.1 Olea europaea HOM05D000001 ORTHO05D009961 9.5e-06 53.5 56 41.1


User provided reference genes

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