Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001039 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 2.3e-154 548.9 282 100.0
Dinv39164 Davidia involucrata HOM05D004377 ORTHO05D005168 8.4e-149 530.4 280 95.0
Hma1.2p1_0316F.1_g122900 Hydrangea macrophylla HOM05D004377 ORTHO05D005168 2.1e-144 515.8 282 90.8
Dinv21652 Davidia involucrata HOM05D004377 ORTHO05D005168 5.3e-143 511.1 282 91.1
Cfa012684 Carpinus fangiana HOM05D004377 ORTHO05D005168 6.9e-143 510.8 282 90.1
Duzib205G1290 Durio zibethinus HOM05D004377 ORTHO05D005168 5.8e-142 507.7 282 89.4
Thecc.03G248500 Theobroma cacao HOM05D004377 ORTHO05D005168 2.9e-141 505.4 282 89.0
COL.COLO4_37134 Corchorus olitorius HOM05D004377 ORTHO05D005168 1.4e-140 503.1 282 88.3
Atru.chr9.1283 Acer truncatum HOM05D004377 ORTHO05D005168 2.4e-140 502.3 280 87.9
CiPaw.12G050900 Carya illinoinensis HOM05D004377 ORTHO05D005168 3.2e-140 501.9 282 87.6
CSS0042619 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 5.4e-140 501.1 269 92.9
Ciclev10021569m.g Citrus clementina HOM05D004377 ORTHO05D005168 9.3e-140 500.4 282 85.8
Manes.02G041200 Manihot esculenta HOM05D004377 ORTHO05D005168 9.3e-140 500.4 282 87.2
PGR031G0408 Punica granatum HOM05D004377 ORTHO05D005168 1.2e-139 500.0 282 86.5
Actinidia10840 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.6e-139 499.6 284 89.4
Actinidia02148 Actinidia chinensis HOM05D004377 ORTHO05D005168 3.5e-139 498.4 282 88.7
Eucgr.D02097 Eucalyptus grandis HOM05D004377 ORTHO05D005168 7.9e-139 497.3 282 86.5
CAN.G1227.21 Capsicum annuum HOM05D004377 ORTHO05D005168 1.0e-138 496.9 282 87.2
Gohir.D12G218200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.8e-138 496.1 282 86.2
Gorai.008G233800 Gossypium raimondii HOM05D004377 ORTHO05D005168 1.8e-138 496.1 282 86.2
Solyc08g007320.3 Solanum lycopersicum HOM05D004377 ORTHO05D005168 3.0e-138 495.4 282 86.9
RcHm_v2.0_Chr7g0203831 Rosa chinensis HOM05D004377 ORTHO05D005168 3.9e-138 495.0 282 85.8
FAN13G0320 Fragaria x ananassa HOM05D004377 ORTHO05D005168 5.1e-138 494.6 282 85.5
Gohir.A12G215600 Gossypium hirsutum HOM05D004377 ORTHO05D005168 6.7e-138 494.2 282 85.8
FAN18G3774 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.5e-137 493.0 282 85.5
TWI81G0568 Tripterygium wilfordii HOM05D004377 ORTHO05D005168 2.5e-137 492.3 282 85.1
Migut.A01127 Erythranthe guttata HOM05D004377 ORTHO05D005168 4.3e-137 491.5 282 86.9
FAN04G2360 Fragaria x ananassa HOM05D004377 ORTHO05D005168 7.4e-137 490.7 282 85.1
Glyma.17G143400 Glycine max HOM05D004377 ORTHO05D005168 2.8e-136 488.8 282 84.8
Peaxi162Scf00102g00106 Petunia axillaris HOM05D004377 ORTHO05D005168 2.8e-136 488.8 282 85.5
Cc08_g12200 Coffea canephora HOM05D004377 ORTHO05D005168 3.7e-136 488.4 282 84.0
Lalb_Chr16g0386801 Lupinus albus HOM05D004377 ORTHO05D005168 6.2e-136 487.6 282 84.0
CANSAT21G0788 Cannabis sativa HOM05D004377 ORTHO05D005168 1.1e-135 486.9 282 85.8
MSTRG.12119 Avicennia marina HOM05D004377 ORTHO05D005168 5.3e-135 484.6 282 84.0
Glyma.05G061700 Glycine max HOM05D004377 ORTHO05D005168 5.3e-135 484.6 282 83.3
Phvul.003G222200 Phaseolus vulgaris HOM05D004377 ORTHO05D005168 1.2e-134 483.4 282 83.0
CsaV3_5G004410 Cucumis sativus L. HOM05D004377 ORTHO05D005168 1.5e-134 483.0 282 82.3
Gohir.A11G027200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.5e-134 483.0 282 84.8
VMungo0251G2239 Vigna mungo HOM05D004377 ORTHO05D005168 1.5e-134 483.0 281 83.3
arahy.Tifrunner.gnm1.ann1.XFA1VC Arachis hypogaea HOM05D004377 ORTHO05D005168 2.6e-134 482.3 281 83.6
MELO3C005517.2 Cucumis melo HOM05D004377 ORTHO05D005168 3.4e-134 481.9 282 81.9
Nn4g26339 Nelumbo nucifera HOM05D004377 ORTHO05D005168 7.6e-134 480.7 282 84.4
Nn1g02340 Nelumbo nucifera HOM05D004377 ORTHO05D005168 1.0e-133 480.3 282 84.0
Prupe.5G065700 Prunus persica HOM05D004377 ORTHO05D005168 2.9e-133 478.8 282 81.9
Sed0026125 Sechium edule HOM05D004377 ORTHO05D005168 2.9e-133 478.8 282 81.9
Lj4g0001332 Lotus japonicus HOM05D004377 ORTHO05D005168 1.4e-132 476.5 282 81.6
MD06G1053000 Malus domestica HOM05D004377 ORTHO05D005168 1.4e-132 476.5 282 81.9
Psat4g072760 Pisum sativum HOM05D004377 ORTHO05D005168 1.9e-132 476.1 282 81.9
Rhsim07G0110500 Rhododendron simsii HOM05D004377 ORTHO05D005168 3.2e-132 475.3 290 83.8
vmacro00002 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 5.5e-132 474.6 316 77.8
Lalb_Chr05g0221171 Lupinus albus HOM05D004377 ORTHO05D005168 7.1e-132 474.2 282 81.6
Sed0028099 Sechium edule HOM05D004377 ORTHO05D005168 7.1e-132 474.2 282 81.6
Lsat_1_v5_gn_6_92481 Lactuca sativa HOM05D004377 ORTHO05D005168 9.3e-132 473.8 282 83.7
GSVIVG01006273001 Vitis vinifera HOM05D004377 ORTHO05D005168 9.3e-132 473.8 266 89.1
MD04G1059900 Malus domestica HOM05D004377 ORTHO05D005168 1.6e-131 473.0 282 81.6
DCAR_008505 Daucus carota HOM05D004377 ORTHO05D005168 2.1e-131 472.6 282 84.0
HanXRQChr03g0088831 Helianthus annuus HOM05D004377 ORTHO05D005168 2.1e-131 472.6 282 83.7
Medtr4g100740 Medicago truncatula HOM05D004377 ORTHO05D005168 2.1e-131 472.6 282 81.9
TAR375G0521 Trochodendron aralioides HOM05D004377 ORTHO05D005168 2.7e-131 472.2 286 82.5
ClCG01G004220 Citrullus lanatus HOM05D004377 ORTHO05D005168 3.5e-131 471.9 293 78.5
Aqoxy5G00459 Aquilegia oxysepala HOM05D004377 ORTHO05D005168 6.0e-131 471.1 282 82.3
Potri.001G155900 Populus trichocarpa HOM05D004377 ORTHO05D005168 7.9e-131 470.7 282 82.6
Lj4g0011374 Lotus japonicus HOM05D004377 ORTHO05D005168 1.0e-130 470.3 282 81.2
Ca_21977_v3 Cicer arietinum L. HOM05D004377 ORTHO05D005168 1.3e-130 469.9 282 80.5
TPR.G37661 Trifolium pratense HOM05D004377 ORTHO05D005168 1.3e-130 469.9 282 81.2
Nitab4.5_0002225g0040 Nicotiana tabacum HOM05D004377 ORTHO05D005168 1.8e-130 469.5 288 81.9
ECA240G2341 Erigeron canadensis HOM05D004377 ORTHO05D005168 5.1e-130 468.0 282 83.0
Potri.003G078900 Populus trichocarpa HOM05D004377 ORTHO05D005168 8.7e-130 467.2 282 82.6
FAN08G2251 Fragaria x ananassa HOM05D004377 ORTHO05D005168 7.4e-129 464.2 277 81.9
Lj8A268T28 Lonicera japonica HOM05D004377 ORTHO05D005168 2.8e-128 462.2 266 85.3
Ah.12g054290 Amaranthus hybridus HOM05D004377 ORTHO05D005168 8.2e-128 460.7 278 80.6
PSO832G1836 Papaver somniferum HOM05D004377 ORTHO05D005168 1.8e-127 459.5 282 79.8
AUR62007109 Chenopodium quinoa HOM05D004377 ORTHO05D005168 4.0e-127 458.4 283 80.9
THA.LOC104798366 Tarenaya hassleriana HOM05D004377 ORTHO05D005168 1.5e-126 456.4 283 79.9
PSO210G5659 Papaver somniferum HOM05D004377 ORTHO05D005168 2.0e-126 456.1 282 79.1
arahy.Tifrunner.gnm1.ann1.E2A47G Arachis hypogaea HOM05D004377 ORTHO05D005168 4.5e-126 454.9 341 68.3
HanXRQChr17g0549351 Helianthus annuus HOM05D004377 ORTHO05D005168 1.0e-125 453.8 282 80.1
ATR0697G021 Amborella trichopoda HOM05D004377 ORTHO05D005168 1.3e-125 453.4 282 79.4
arahy.Tifrunner.gnm1.ann1.ID9RWP Arachis hypogaea HOM05D004377 ORTHO05D005168 2.2e-125 452.6 282 79.4
vmacro14068 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 2.2e-125 452.6 267 85.4
Haze_07947 Corylus avellana HOM05D004377 ORTHO05D005168 5.0e-125 451.4 285 81.4
Nitab4.5_0000712g0120 Nicotiana tabacum HOM05D004377 ORTHO05D005168 1.1e-124 450.3 279 80.3
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.4e-124 449.9 283 78.4
Sc07g0009230 Simmondsia chinensis HOM05D004377 ORTHO05D005168 1.4e-124 449.9 266 82.7
Sp2g12120 Schrenkiella parvula HOM05D004377 ORTHO05D005168 4.2e-124 448.4 283 78.1
SGA_v2.0_scaffold199G41183 Striga asiatica HOM05D004377 ORTHO05D005168 9.3e-124 447.2 313 74.8
Thhalv10000986m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 2.1e-123 446.0 283 77.4
BraA02t08132Z Brassica rapa HOM05D004377 ORTHO05D005168 2.7e-123 445.7 281 77.9
CARHR173960 Cardamine hirsuta HOM05D004377 ORTHO05D005168 3.5e-123 445.3 283 77.0
Gohir.D11G026400 Gossypium hirsutum HOM05D004377 ORTHO05D005168 7.9e-123 444.1 282 79.8
Carub.0008s0037 Capsella rubella HOM05D004377 ORTHO05D005168 1.3e-122 443.4 283 78.1
CARHR224020 Cardamine hirsuta HOM05D004377 ORTHO05D005168 2.3e-122 442.6 286 77.3
AT4G17420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 5.1e-122 441.4 286 77.6
Carub.0007s2400 Capsella rubella HOM05D004377 ORTHO05D005168 1.5e-121 439.9 286 77.3
Lalb_Chr04g0253671 Lupinus albus HOM05D004377 ORTHO05D005168 2.5e-121 439.1 282 77.7
AL8G10630 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 3.3e-121 438.7 283 76.3
Duzib068G0502 Durio zibethinus HOM05D004377 ORTHO05D005168 3.3e-121 438.7 282 79.8
AL7G37300 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 5.7e-121 438.0 286 77.3
AT5G47420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 5.7e-121 438.0 283 76.7
DCAR_006841 Daucus carota HOM05D004377 ORTHO05D005168 5.7e-121 438.0 266 82.3
TAR629G1293 Trochodendron aralioides HOM05D004377 ORTHO05D005168 5.7e-121 438.0 282 79.8
CDE02G4267 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 1.6e-120 436.4 286 76.9
Thhalv10025916m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 2.2e-120 436.0 286 76.2
A01p19930 Brassica napus HOM05D004377 ORTHO05D005168 8.2e-120 434.1 286 76.9
Sp7g16770 Schrenkiella parvula HOM05D004377 ORTHO05D005168 1.4e-119 433.3 286 75.5
BcaNung00095 Brassica carinata HOM05D004377 ORTHO05D005168 1.8e-119 433.0 286 76.6
A01p19950 Brassica napus HOM05D004377 ORTHO05D005168 1.8e-119 433.0 286 76.9
BraA01t01921Z Brassica rapa HOM05D004377 ORTHO05D005168 1.8e-119 433.0 286 76.6
BcaC09g50474 Brassica carinata HOM05D004377 ORTHO05D005168 3.1e-119 432.2 286 76.6
Sabra03G0049000 Salix brachista HOM05D004377 ORTHO05D005168 5.3e-119 431.4 264 80.7
C01p25030 Brassica napus HOM05D004377 ORTHO05D005168 1.2e-118 430.3 286 76.6
Sabra01G0125600 Salix brachista HOM05D004377 ORTHO05D005168 1.3e-117 426.8 295 73.9
BolC2t10957H Brassica oleracea HOM05D004377 ORTHO05D005168 1.7e-117 426.4 281 75.4
AUR62019971 Chenopodium quinoa HOM05D004377 ORTHO05D005168 2.2e-117 426.0 283 76.3
A02p31280 Brassica napus HOM05D004377 ORTHO05D005168 5.0e-117 424.9 325 67.1
RcHm_v2.0_Chr7g0203871 Rosa chinensis HOM05D004377 ORTHO05D005168 6.5e-117 424.5 282 76.6
BolC1t02447H Brassica oleracea HOM05D004377 ORTHO05D005168 5.5e-116 421.4 276 76.8
CDE05G2427 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 1.6e-115 419.9 286 74.5
HPP92_007932 Vanilla planifolia HOM05D004377 ORTHO05D005168 7.9e-115 417.5 282 71.6
HPP92_007952 Vanilla planifolia HOM05D004377 ORTHO05D005168 7.9e-115 417.5 282 71.6
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 1.8e-114 416.4 272 76.8
Cpa.g.sc29.192 Carica papaya HOM05D004377 ORTHO05D005168 2.3e-114 416.0 240 83.3
MBI09_g26154_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 5.1e-114 414.8 306 70.3
unitig_736.g22277 Utricularia gibba HOM05D004377 ORTHO05D005168 6.7e-114 414.5 247 82.2
SEGI_38141 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 2.0e-113 412.9 281 73.0
BcaC03g16958 Brassica carinata HOM05D004377 ORTHO05D005168 2.4e-111 406.0 282 74.1
C02p48650 Brassica napus HOM05D004377 ORTHO05D005168 2.4e-111 406.0 282 74.1
Lsat_1_v5_gn_3_1221 Lactuca sativa HOM05D004377 ORTHO05D005168 1.5e-110 403.3 287 72.8
Sopen08g003260 Solanum pennellii HOM05D004377 ORTHO05D005168 7.7e-110 401.0 231 85.3
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 2.9e-109 399.1 272 74.6
Gorai.007G028700 Gossypium raimondii HOM05D004377 ORTHO05D005168 3.2e-108 395.6 282 74.1
BcaC06g34254 Brassica carinata HOM05D003894 ORTHO05D004584 1.2e-107 393.7 250 77.6
EL10Ac5g12360 Beta vulgaris HOM05D004377 ORTHO05D005168 3.6e-107 392.1 283 71.7
MBI08_g41738_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 3.0e-106 389.0 266 72.2
Actinidia14411 Actinidia chinensis HOM05D004377 ORTHO05D005168 8.8e-106 387.5 258 80.6
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.3e-104 383.6 276 72.5
Os03g0747300 Oryza sativa ssp. japonica HOM05D004377 ORTHO05D005168 2.4e-103 379.4 283 65.4
SGA_v2.0_scaffold199G41214 Striga asiatica HOM05D004377 ORTHO05D005168 7.0e-103 377.9 213 87.3
arahy.Tifrunner.gnm1.ann1.CS1SDE Arachis hypogaea HOM05D004377 ORTHO05D005168 1.2e-102 377.1 341 60.4
FvH4_5g19370 Fragaria vesca HOM05D004377 ORTHO05D005168 4.5e-102 375.2 213 84.5
Nitab4.5_0000618g0130 Nicotiana tabacum HOM05D004377 ORTHO05D005168 4.5e-102 375.2 279 69.2
RcHm_v2.0_Chr2g0120481 Rosa chinensis HOM05D004377 ORTHO05D005168 8.0e-99 364.4 223 78.9
SHI09598 Sapria himalayana HOM05D004377 ORTHO05D005168 7.5e-89 331.3 267 61.8
BcaC06g34256 Brassica carinata HOM05D004377 ORTHO05D005168 3.7e-88 328.9 249 70.3
Oeu027011.1 Olea europaea HOM05D004377 ORTHO05D005168 3.4e-81 305.8 239 67.8
BcaC06g31391 Brassica carinata HOM05D004377 ORTHO05D005168 5.7e-81 305.1 281 61.2
SMO356G0134 Selaginella moellendorffii HOM05D004377 ORTHO05D005168 1.7e-80 303.5 284 57.0
Zm00001eb057110 Zea mays HOM05D004377 ORTHO05D005168 3.0e-74 282.7 213 62.4
FAN15G2264 Fragaria x ananassa HOM05D004377 ORTHO05D005168 7.5e-57 224.9 280 51.4
Hund14575 Selenicereus undatus HOM05D004377 ORTHO05D005168 1.9e-55 220.3 172 67.4
Actinidia31514 Actinidia chinensis HOM05D004377 ORTHO05D005168 5.4e-55 218.8 211 63.5
AagrBONN_evm.TU.Sc2ySwM_362.367 Anthoceros agrestis HOM05D004377 ORTHO05D005168 7.1e-55 218.4 173 60.7
Mapoly0006s0223 Marchantia polymorpha HOM05D004377 ORTHO05D005168 7.1e-55 218.4 173 63.0
FAN27G2545 Fragaria x ananassa HOM05D004377 ORTHO05D005168 9.2e-55 218.0 329 45.3
Oeu012199.1 Olea europaea HOM05D004377 ORTHO05D005168 2.8e-51 206.5 120 80.8
Aa31LG6G160 Aethionema arabicum HOM05D004377 ORTHO05D005168 1.9e-47 193.7 269 43.5
TAR374G0316 Trochodendron aralioides HOM05D004377 ORTHO05D005168 6.0e-46 188.7 122 75.4
MBI09_g24445_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 2.8e-43 179.9 180 57.2
GSVIVG01015047001 Vitis vinifera HOM05D004377 ORTHO05D005168 5.4e-31 139.0 85 75.3
FAN24G1967 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.2e-30 137.9 304 38.8
FvH4_2g20120 Fragaria vesca HOM05D004377 ORTHO05D005168 8.7e-29 131.7 280 38.2
SEGI_12924 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 1.4e-26 124.4 120 55.0
MCO15G334 Micromonas commoda HOM05D004377 ORTHO05D005168 5.3e-26 122.5 220 35.0
MBI09_g42042_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 9.9e-25 118.2 175 43.4
Nitab4.5_0002372g0030 Nicotiana tabacum HOM05D004377 ORTHO05D005168 1.2e-22 111.3 66 83.3
SEGI_18353 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 2.3e-21 107.1 94 57.4
Nitab4.5_0001410g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 1.5e-20 104.4 118 50.0
Actinidia31513 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.0e-16 91.7 74 68.9
Nitab4.5_0002881g0130 Nicotiana tabacum HOM05D004152 ORTHO05D004878 1.8e-13 80.9 47 85.1
SEGI_16571 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 1.1e-07 61.6 49 63.3


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