Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 2.7e-89 332.0 173 100.0
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 6.0e-81 304.3 173 90.2
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 3.3e-79 298.5 175 90.3
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 2.4e-77 292.4 173 85.5
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 3.1e-77 292.0 176 87.5
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 1.2e-76 290.0 173 86.1
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 7.6e-76 287.3 174 83.9
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 7.6e-76 287.3 173 85.5
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 9.9e-76 287.0 173 85.5
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 2.9e-75 285.4 173 82.7
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 6.4e-75 284.3 173 82.7
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 6.4e-75 284.3 173 82.7
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 6.4e-75 284.3 173 82.7
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 1.4e-74 283.1 173 83.2
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 4.2e-74 281.6 178 83.7
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 5.4e-74 281.2 173 82.7
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 7.1e-74 280.8 173 80.9
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 2.7e-73 278.9 174 83.3
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 1.3e-72 276.6 174 83.3
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 2.3e-72 275.8 174 82.8
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 3.9e-72 275.0 173 81.5
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 6.6e-72 274.2 173 79.2
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 1.5e-71 273.1 175 81.7
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 1.5e-71 273.1 173 79.8
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 1.5e-71 273.1 173 79.2
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 3.3e-71 271.9 173 82.7
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 3.3e-71 271.9 172 82.6
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 5.6e-71 271.2 173 80.9
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 7.3e-71 270.8 174 81.6
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 9.6e-71 270.4 174 79.9
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 1.3e-70 270.0 174 81.0
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 1.6e-70 269.6 173 78.6
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 3.6e-70 268.5 174 81.6
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 1.1e-69 266.9 173 78.6
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 1.1e-69 266.9 175 83.4
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 3.1e-69 265.4 175 80.6
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 3.1e-69 265.4 174 80.5
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 4.0e-69 265.0 174 80.5
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 4.0e-69 265.0 174 80.5
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 4.0e-69 265.0 175 81.1
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 1.2e-68 263.5 166 83.7
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 1.2e-68 263.5 174 79.9
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 1.2e-68 263.5 175 80.6
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 2.0e-68 262.7 175 80.0
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.0e-68 262.7 174 79.9
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 3.4e-68 261.9 175 80.0
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 4.5e-68 261.5 174 78.7
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 2.9e-67 258.8 174 78.2
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 3.8e-67 258.5 173 78.6
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 4.9e-67 258.1 173 79.2
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.4e-66 256.5 173 76.9
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 5.4e-66 254.6 166 81.9
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 5.4e-66 254.6 175 78.3
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.6e-65 253.1 167 81.4
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 1.6e-65 253.1 173 75.1
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 1.6e-65 253.1 173 75.1
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 2.7e-65 252.3 174 75.9
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 7.9e-65 250.8 176 78.4
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 1.0e-64 250.4 176 76.1
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 2.3e-64 249.2 174 76.4
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 6.7e-64 247.7 173 74.0
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 8.7e-64 247.3 174 75.9
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.1e-63 246.9 173 75.7
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 7.4e-63 244.2 165 79.4
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 1.1e-61 240.4 175 76.0
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 9.0e-61 237.3 177 72.3
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 4.9e-59 231.5 153 79.7
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 1.1e-58 230.3 175 70.9
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 1.9e-58 229.6 175 70.9
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 1.9e-58 229.6 175 70.9
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 1.9e-58 229.6 175 70.9
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 1.9e-58 229.6 176 71.6
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 3.2e-58 228.8 169 75.1
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 3.2e-58 228.8 175 70.9
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 3.2e-58 228.8 175 70.3
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 4.2e-58 228.4 175 70.3
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 4.2e-58 228.4 174 70.7
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 9.3e-58 227.3 175 69.1
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 1.2e-57 226.9 175 69.7
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 1.6e-57 226.5 138 81.9
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 2.7e-57 225.7 174 67.8
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 3.5e-57 225.3 175 69.1
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 3.5e-57 225.3 175 69.1
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 3.5e-57 225.3 175 69.1
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 4.6e-57 224.9 176 67.0
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 6.0e-57 224.6 175 69.1
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 3.9e-56 221.9 151 80.8
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 3.9e-56 221.9 175 69.1
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 2.1e-54 216.1 173 64.2
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 1.1e-53 213.8 173 67.6
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 1.1e-53 213.8 153 77.1
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 6.5e-51 204.5 140 71.4
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 2.1e-49 199.5 178 59.0
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 2.1e-49 199.5 175 61.1
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 2.7e-49 199.1 153 69.3
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 2.3e-48 196.1 151 69.5
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 7.4e-47 191.0 138 79.7
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 5.9e-44 181.4 138 77.5
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 1.7e-43 179.9 173 59.0
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 5.0e-43 178.3 137 72.3
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.9e-42 176.4 137 71.5
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 1.6e-41 173.3 164 62.2
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 2.1e-41 172.9 178 55.6
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 2.3e-40 169.5 117 78.6
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 5.7e-39 164.9 114 79.8
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 1.2e-36 157.1 108 80.6
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 5.9e-36 154.8 106 82.1
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 5.0e-35 151.8 162 57.4
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 6.1e-33 144.8 112 73.2
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 2.6e-28 129.4 173 44.5
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 3.3e-23 112.5 106 63.2
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 2.2e-22 109.8 105 62.9
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 4.8e-22 108.6 165 40.6
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 1.1e-18 97.4 98 58.2
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 1.5e-18 97.1 69 73.9
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 1.2e-17 94.0 80 66.2
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 6.1e-17 91.7 98 56.1
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 8.3e-14 81.3 77 57.1
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 1.1e-13 80.9 121 49.6
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 1.4e-13 80.5 97 53.6
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 4.1e-13 79.0 59 69.5
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 5.4e-13 78.6 59 69.5
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 5.4e-13 78.6 107 49.5
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 9.1e-13 77.8 59 69.5
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 1.2e-12 77.4 59 67.8
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 4.5e-12 75.5 59 67.8
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 1.0e-11 74.3 60 68.3
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 2.2e-11 73.2 95 49.5
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 5.0e-11 72.0 59 67.8
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 8.5e-11 71.2 66 63.6
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 4.2e-10 68.9 71 57.7
Sabra04G0079400 Salix brachista HOM05D005631 ORTHO05D006765 2.7e-09 66.2 80 51.2
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 2.3e-08 63.2 50 78.0
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 4.0e-08 62.4 44 77.3
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 6.8e-08 61.6 44 77.3
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 1.5e-07 60.5 44 75.0
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 3.4e-07 59.3 101 45.5
Sabra15G0067400 Salix brachista HOM05D003748 ORTHO05D004108 4.4e-07 58.9 81 46.9
BcaC02g08205 Brassica carinata HOM05D005631 ORTHO05D006765 1.3e-06 57.4 46 63.0
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 2.2e-06 56.6 137 32.8
Sabra10G0082900 Salix brachista HOM05D005631 ORTHO05D006765 4.9e-06 55.5 60 53.3


User provided reference genes

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