Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 0.0e+00 1210.3 683 100.0
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 5.0e-232 808.1 632 70.7
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 1.9e-226 789.6 650 67.1
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 6.2e-222 774.6 643 69.2
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 2.4e-218 762.7 631 69.1
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 9.2e-218 760.8 607 67.9
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 2.5e-215 752.7 651 63.1
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 4.7e-214 748.4 625 66.4
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 2.0e-212 743.0 634 65.5
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 2.0e-212 743.0 642 64.5
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 2.6e-212 742.7 642 67.3
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 2.2e-211 739.6 638 64.3
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 9.3e-210 734.2 603 69.7
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 3.5e-209 732.3 653 64.5
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 1.0e-208 730.7 654 61.2
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.5e-207 726.9 609 68.5
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 1.3e-206 723.8 631 66.7
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 4.8e-206 721.8 637 66.4
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 9.0e-205 717.6 654 62.4
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 2.0e-204 716.5 615 64.9
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 1.7e-203 713.4 649 65.0
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 2.2e-203 713.0 597 68.7
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 2.2e-203 713.0 647 65.4
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 3.8e-203 712.2 660 59.2
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 6.4e-203 711.4 614 65.1
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 1.4e-202 710.3 584 67.1
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 1.4e-202 710.3 569 71.4
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 1.9e-202 709.9 646 64.4
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 1.9e-202 709.9 655 64.4
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 9.3e-202 707.6 580 67.9
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 2.7e-201 706.1 601 65.1
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 5.1e-200 701.8 646 63.9
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 1.1e-199 700.7 622 66.2
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 3.3e-199 699.1 654 59.9
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 3.3e-199 699.1 579 66.0
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 1.6e-198 696.8 613 63.1
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 2.8e-198 696.0 645 60.0
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 3.7e-198 695.7 591 64.6
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.8e-197 693.3 619 66.1
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 2.4e-197 693.0 595 63.0
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 3.4e-196 689.1 611 62.4
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 4.5e-196 688.7 612 62.7
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 5.8e-196 688.3 657 61.0
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 9.9e-196 687.6 621 64.6
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 2.9e-195 686.0 654 61.6
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 4.2e-194 682.2 660 59.5
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 2.1e-193 679.9 639 60.7
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 2.7e-193 679.5 444 83.8
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 7.9e-193 677.9 604 61.3
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 1.1e-191 674.1 624 61.9
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 3.3e-191 672.5 634 61.7
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 3.3e-191 672.5 652 60.7
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 3.3e-191 672.5 643 58.5
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 5.6e-191 671.8 646 58.8
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 1.3e-190 670.6 632 62.2
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 6.2e-190 668.3 608 63.3
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 1.4e-189 667.2 637 59.7
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 2.4e-189 666.4 626 60.9
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 9.0e-189 664.5 642 58.7
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 1.5e-188 663.7 510 74.9
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 2.6e-188 662.9 625 61.4
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 4.5e-188 662.1 601 61.1
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 4.5e-188 662.1 577 61.0
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 4.5e-188 662.1 631 62.8
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 7.6e-188 661.4 660 58.8
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 1.0e-187 661.0 642 62.3
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 1.0e-187 661.0 642 62.1
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 1.3e-187 660.6 588 63.3
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 1.3e-187 660.6 626 63.1
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 1.1e-186 657.5 675 57.6
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 1.4e-186 657.1 621 60.4
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 1.9e-186 656.8 632 58.2
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 2.5e-186 656.4 589 62.5
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 3.2e-186 656.0 578 60.2
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 5.5e-186 655.2 615 60.7
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 9.3e-186 654.4 604 60.1
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 4.6e-185 652.1 608 63.3
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 5.7e-183 645.2 583 61.1
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 5.7e-183 645.2 594 63.8
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 1.8e-181 640.2 648 55.9
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 4.1e-181 639.0 534 69.1
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 6.9e-181 638.3 606 61.6
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 2.6e-180 636.3 608 61.2
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 6.5e-179 631.7 588 64.6
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 1.1e-178 630.9 619 60.4
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 2.1e-177 626.7 469 68.0
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 2.3e-176 623.2 527 65.5
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 2.5e-175 619.8 552 62.9
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 5.7e-175 618.6 588 61.1
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 1.2e-172 610.9 583 59.0
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 1.8e-165 587.0 603 57.0
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 5.7e-159 565.5 546 57.3
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 1.7e-155 553.9 578 56.2
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 9.4e-154 548.1 619 50.7
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 9.4e-154 548.1 543 58.6
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 2.8e-150 536.6 555 55.9
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 1.5e-143 514.2 591 49.7
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 3.5e-124 449.9 613 46.7
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 9.6e-98 362.1 280 63.9
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 1.2e-71 275.4 639 33.5
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 1.2e-71 275.4 639 33.5
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 1.5e-71 275.0 445 43.6
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 9.1e-56 222.6 418 34.2
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 5.2e-27 127.1 189 40.7
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 6.8e-27 126.7 139 50.4
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 3.7e-25 120.9 153 47.7
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 1.4e-16 92.4 207 33.8
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 5.9e-15 87.0 127 41.7
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.9e-13 82.0 314 28.3
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 2.0e-10 72.0 123 35.0
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 4.4e-10 70.9 132 38.6
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 7.5e-10 70.1 106 33.0
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.2e-09 68.6 99 46.5
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 8.3e-09 66.6 50 54.0
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.9e-08 65.5 85 36.5


User provided reference genes

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