Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000330 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 6.4e-137 490.7 245 100.0
CSS0028406 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 5.8e-122 441.0 222 99.1
Actinidia31089 Actinidia chinensis HOM05D005759 ORTHO05D007172 1.1e-83 313.9 222 73.0
Actinidia34708 Actinidia chinensis HOM05D005759 ORTHO05D007172 1.1e-83 313.9 222 73.0
Dinv31290 Davidia involucrata HOM05D005759 ORTHO05D007172 6.5e-81 304.7 223 69.5
Rhsim09G0144200 Rhododendron simsii HOM05D005759 ORTHO05D007172 8.2e-68 261.2 230 62.6
vmacro10276 Vaccinium macrocarpon HOM05D005759 ORTHO05D007172 3.1e-67 259.2 225 63.1
RhsimUnG0061600 Rhododendron simsii HOM05D005759 ORTHO05D007172 7.0e-67 258.1 230 61.7
Hma1.2p1_0352F.1_g133040 Hydrangea macrophylla HOM05D005759 ORTHO05D007172 8.8e-62 241.1 231 57.6
Duzib114G0077 Durio zibethinus HOM05D005759 ORTHO05D007172 8.6e-57 224.6 230 52.6
Cfa011218 Carpinus fangiana HOM05D005759 ORTHO05D007172 3.2e-56 222.6 222 54.1
Thecc.10G099000 Theobroma cacao HOM05D005759 ORTHO05D007172 5.5e-56 221.9 226 51.8
Haze_02624 Corylus avellana HOM05D005759 ORTHO05D007172 6.1e-55 218.4 222 54.1
GSVIVG01034722001 Vitis vinifera HOM05D005759 ORTHO05D007172 8.0e-55 218.0 226 54.4
COL.COLO4_35597 Corchorus olitorius HOM05D005759 ORTHO05D007172 1.8e-54 216.9 223 52.5
Prupe.2G090100 Prunus persica HOM05D005759 ORTHO05D007172 5.2e-54 215.3 235 51.5
CiPaw.13G035800 Carya illinoinensis HOM05D005759 ORTHO05D007172 9.8e-53 211.1 222 53.6
QL04p040912 Quercus lobata HOM05D005759 ORTHO05D007172 9.8e-53 211.1 225 52.9
Ciclev10031564m.g Citrus clementina HOM05D005759 ORTHO05D007172 2.8e-52 209.5 225 52.4
TAR623G0127 Trochodendron aralioides HOM05D005759 ORTHO05D007172 3.7e-52 209.1 223 52.9
MD07G1072000 Malus domestica HOM05D005759 ORTHO05D007172 4.9e-52 208.8 222 51.8
DCAR_030749 Daucus carota HOM05D005759 ORTHO05D007172 4.1e-51 205.7 222 50.9
Gorai.011G232200 Gossypium raimondii HOM05D005759 ORTHO05D007172 5.4e-51 205.3 227 50.7
Gohir.D10G206700 Gossypium hirsutum HOM05D005759 ORTHO05D007172 2.0e-50 203.4 227 50.7
Oeu059850.1 Olea europaea HOM05D005759 ORTHO05D007172 3.5e-50 202.6 237 51.9
RcHm_v2.0_Chr1g0334181 Rosa chinensis HOM05D005759 ORTHO05D007172 1.3e-49 200.7 224 50.4
Nn2g13981 Nelumbo nucifera HOM05D005759 ORTHO05D007172 2.9e-49 199.5 226 49.1
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 5.0e-49 198.7 222 52.3
MD02G1244900 Malus domestica HOM05D005759 ORTHO05D007172 5.0e-49 198.7 223 49.8
Cc02_g10290 Coffea canephora HOM05D005759 ORTHO05D007172 1.5e-48 197.2 222 46.4
MBI17_g30596_MAGBIO Magnolia biondii HOM05D005759 ORTHO05D007172 1.5e-48 197.2 226 49.6
Atru.chr12.959 Acer truncatum HOM05D005759 ORTHO05D007172 3.3e-48 196.1 222 50.0
Manes.07G091866 Manihot esculenta HOM05D005759 ORTHO05D007172 5.6e-48 195.3 225 51.6
TWI38G0593 Tripterygium wilfordii HOM05D005759 ORTHO05D007172 2.8e-47 193.0 229 52.0
Sc06g0002190 Simmondsia chinensis HOM05D005759 ORTHO05D007172 1.0e-46 191.0 223 48.0
FAN03G0647 Fragaria x ananassa HOM05D005759 ORTHO05D007172 2.4e-43 179.9 235 46.0
PGR142G1839 Punica granatum HOM05D005759 ORTHO05D007172 3.2e-43 179.5 226 48.2
MSTRG.409 Avicennia marina HOM05D005759 ORTHO05D007172 7.0e-43 178.3 226 44.7
Potri.010G234000 Populus trichocarpa HOM05D005759 ORTHO05D007172 7.0e-43 178.3 222 45.5
FvH4_7g06330 Fragaria vesca HOM05D005759 ORTHO05D007172 3.5e-42 176.0 235 45.5
FAN06G0090 Fragaria x ananassa HOM05D005759 ORTHO05D007172 3.5e-42 176.0 222 46.8
Peaxi162Scf00244g00007 Petunia axillaris HOM05D005759 ORTHO05D007172 3.5e-42 176.0 222 49.1
THA.LOC104826349 Tarenaya hassleriana HOM05D005759 ORTHO05D007172 4.6e-42 175.6 222 45.0
Nitab4.5_0002259g0090 Nicotiana tabacum HOM05D005759 ORTHO05D007172 1.3e-41 174.1 223 48.0
Nitab4.5_0010486g0020 Nicotiana tabacum HOM05D005759 ORTHO05D007172 1.7e-41 173.7 224 48.2
EL10Ac4g08636 Beta vulgaris HOM05D005759 ORTHO05D007172 2.3e-41 173.3 222 42.3
AUR62041544 Chenopodium quinoa HOM05D005759 ORTHO05D007172 3.0e-41 172.9 222 45.0
AUR62041532 Chenopodium quinoa HOM05D005759 ORTHO05D007172 1.5e-40 170.6 222 44.1
Hund06749 Selenicereus undatus HOM05D005759 ORTHO05D007172 1.9e-40 170.2 222 43.2
Sed0025588 Sechium edule HOM05D005759 ORTHO05D007172 5.6e-40 168.7 223 45.3
Phvul.007G245100 Phaseolus vulgaris HOM05D005759 ORTHO05D007172 9.5e-40 167.9 230 44.8
Migut.F01660 Erythranthe guttata HOM05D005759 ORTHO05D007172 3.6e-39 166.0 224 42.9
Glyma.02G165400 Glycine max HOM05D005759 ORTHO05D007172 1.1e-38 164.5 223 43.5
Lsat_1_v5_gn_2_102781 Lactuca sativa HOM05D005759 ORTHO05D007172 3.1e-38 162.9 226 42.9
SalBow6G0601 Salvia bowleyana HOM05D005759 ORTHO05D007172 3.1e-38 162.9 223 42.2
Ah.04g163640 Amaranthus hybridus HOM05D005759 ORTHO05D007172 4.0e-38 162.5 222 40.1
CAN.G135.64 Capsicum annuum HOM05D005759 ORTHO05D007172 6.8e-38 161.8 224 46.0
CANSAT56G0546 Cannabis sativa HOM05D005759 ORTHO05D007172 2.0e-37 160.2 223 44.8
Duzib128G1757 Durio zibethinus HOM05D005759 ORTHO05D007172 2.6e-37 159.8 138 58.7
PGSC0003DMG400027344 Solanum tuberosum HOM05D005759 ORTHO05D007172 4.4e-37 159.1 225 42.7
HanXRQChr16g0513241 Helianthus annuus HOM05D005759 ORTHO05D007172 1.7e-36 157.1 222 43.7
MELO3C019880.2 Cucumis melo HOM05D005759 ORTHO05D007172 3.7e-36 156.0 225 43.6
Solyc11g007610.2 Solanum lycopersicum HOM05D005759 ORTHO05D007172 3.7e-36 156.0 225 41.8
SGA_v2.0_scaffold13G06508 Striga asiatica HOM05D005759 ORTHO05D007172 3.7e-36 156.0 223 40.4
CsaV3_2G032950 Cucumis sativus L. HOM05D005759 ORTHO05D007172 6.4e-36 155.2 226 44.2
Psat6g094520 Pisum sativum HOM05D005759 ORTHO05D007172 8.3e-36 154.8 225 39.1
Sabra10G0181400 Salix brachista HOM05D005759 ORTHO05D007172 8.3e-36 154.8 222 42.3
Lj5g0004167 Lotus japonicus HOM05D005759 ORTHO05D007172 1.1e-35 154.5 223 40.4
Eucgr.G02717 Eucalyptus grandis HOM05D005759 ORTHO05D007172 4.1e-35 152.5 221 43.4
HanXRQChr14g0456321 Helianthus annuus HOM05D005759 ORTHO05D007172 4.1e-35 152.5 226 41.6
Sopen11g003460 Solanum pennellii HOM05D005759 ORTHO05D007172 5.4e-35 152.1 225 40.9
Lalb_Chr03g0036351 Lupinus albus HOM05D005759 ORTHO05D007172 9.2e-35 151.4 230 40.9
CDE04G0943 Ceratophyllum demersum HOM05D005759 ORTHO05D007172 1.2e-34 151.0 225 40.4
ClCG08G008080 Citrullus lanatus HOM05D005759 ORTHO05D007172 2.0e-34 150.2 222 43.7
Ca_06884_v3 Cicer arietinum L. HOM05D005759 ORTHO05D007172 6.0e-34 148.7 225 37.3
arahy.Tifrunner.gnm1.ann1.Y61W31 Arachis hypogaea HOM05D005759 ORTHO05D007172 1.3e-33 147.5 223 41.7
arahy.Tifrunner.gnm1.ann1.0Q505S Arachis hypogaea HOM05D005759 ORTHO05D007172 1.7e-33 147.1 222 39.6
Aqoxy1G00957 Aquilegia oxysepala HOM05D005759 ORTHO05D007172 3.0e-33 146.4 228 39.9
ECA238G2526 Erigeron canadensis HOM05D005759 ORTHO05D007172 1.9e-32 143.7 227 40.1
Medtr1g050730 Medicago truncatula HOM05D005759 ORTHO05D007172 1.4e-30 137.5 225 36.9
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 2.3e-30 136.7 242 38.0
Sp4g11420 Schrenkiella parvula HOM05D005759 ORTHO05D007172 4.0e-30 136.0 227 38.8
Thhalv10016555m.g Eutrema salsugineum HOM05D005759 ORTHO05D007172 1.5e-29 134.0 227 39.2
SalBow4G3335 Salvia bowleyana HOM05D005759 ORTHO05D007172 1.5e-29 134.0 162 44.4
TPR.G7613 Trifolium pratense HOM05D005759 ORTHO05D007172 4.4e-29 132.5 226 35.4
AT2G28600 Arabidopsis thaliana HOM05D005759 ORTHO05D007172 7.5e-29 131.7 229 38.9
Migut.F00917 Erythranthe guttata HOM05D005759 ORTHO05D007172 2.2e-28 130.2 232 35.8
HPP92_024384 Vanilla planifolia HOM05D005759 ORTHO05D007172 2.2e-28 130.2 225 36.0
VMungo0720G2821 Vigna mungo HOM05D005759 ORTHO05D007172 4.9e-28 129.0 222 36.9
A08p00720 Brassica napus HOM05D005759 ORTHO05D007172 8.3e-28 128.3 224 38.4
BraA08t32129Z Brassica rapa HOM05D005759 ORTHO05D007172 8.3e-28 128.3 224 38.4
Carub.0004s0956 Capsella rubella HOM05D005759 ORTHO05D007172 3.2e-27 126.3 227 36.1
AL4G23090 Arabidopsis lyrata HOM05D005759 ORTHO05D007172 5.4e-27 125.6 230 37.0
BcaC01g01514 Brassica carinata HOM05D005759 ORTHO05D007172 4.6e-26 122.5 224 35.7
SGA_v2.0_scaffold62G21347 Striga asiatica HOM05D005759 ORTHO05D007172 6.0e-26 122.1 158 44.3
C03p92620 Brassica napus HOM05D005759 ORTHO05D007172 1.3e-25 120.9 224 35.3
PSO339G3253 Papaver somniferum HOM05D005759 ORTHO05D007172 1.3e-25 120.9 223 37.2
unitig_736.g22320 Utricularia gibba HOM05D005759 ORTHO05D007172 1.3e-25 120.9 243 32.1
Nn6g35073 Nelumbo nucifera HOM05D005759 ORTHO05D007172 1.7e-25 120.6 237 37.1
BolC3t21576H Brassica oleracea HOM05D005759 ORTHO05D007172 2.3e-25 120.2 224 35.3
PSO063G1818 Papaver somniferum HOM05D005759 ORTHO05D007172 8.6e-25 118.2 119 48.7
CARHR121620 Cardamine hirsuta HOM05D005759 ORTHO05D007172 5.6e-24 115.5 226 35.0
BcaB04g16965 Brassica carinata HOM05D005759 ORTHO05D007172 7.3e-24 115.2 223 34.1
PSO384G4559 Papaver somniferum HOM05D005759 ORTHO05D007172 2.1e-23 113.6 99 56.6
ATR0820G119 Amborella trichopoda HOM05D005759 ORTHO05D007172 1.4e-22 110.9 222 35.1
unitig_899.g14480 Utricularia gibba HOM05D005759 ORTHO05D007172 1.8e-22 110.5 214 35.0
Zm00001eb164020 Zea mays HOM05D005759 ORTHO05D007172 4.4e-21 105.9 230 35.2
Zm00001eb086490 Zea mays HOM05D005759 ORTHO05D007172 6.0e-18 95.5 102 45.1
Os12g0147500 Oryza sativa ssp. japonica HOM05D005759 ORTHO05D007172 1.7e-17 94.0 104 46.2
Cpa.g.sc720.1 Carica papaya HOM05D005759 ORTHO05D007172 3.3e-16 89.7 158 38.0
SEGI_00328 Sequoiadendron giganteum HOM05D005759 ORTHO05D000001 1.7e-12 77.4 234 27.8
Zm00001eb201540 Zea mays HOM05D005759 ORTHO05D007172 7.1e-11 72.0 67 47.8
PSO170G6466 Papaver somniferum HOM05D005759 ORTHO05D007172 2.3e-09 67.0 60 53.3


User provided reference genes

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