Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000321 Camellia sinensis var. sinensis HOM05D003133 ORTHO05D003642 6.2e-90 334.0 152 100.0
CSS0043939 Camellia sinensis var. sinensis HOM05D003133 ORTHO05D003642 5.3e-49 198.0 114 81.6
CSS0049388 Camellia sinensis var. sinensis HOM05D003133 ORTHO05D003642 5.3e-49 198.0 114 81.6
Rhsim02G0230000 Rhododendron simsii HOM05D003133 ORTHO05D003642 5.3e-49 198.0 114 81.6
Lj8A228T23 Lonicera japonica HOM05D003133 ORTHO05D003642 3.4e-48 195.3 114 79.8
Lj8A232T62 Lonicera japonica HOM05D003133 ORTHO05D003642 3.4e-48 195.3 114 79.8
Solyc08g081010.3 Solanum lycopersicum HOM05D003133 ORTHO05D003642 3.4e-48 195.3 114 79.8
Sopen08g029330 Solanum pennellii HOM05D003133 ORTHO05D003642 3.4e-48 195.3 114 79.8
TAR636G2389 Trochodendron aralioides HOM05D003133 ORTHO05D003642 5.9e-48 194.5 114 78.9
ATR0810G035 Amborella trichopoda HOM05D003133 ORTHO05D003642 7.7e-48 194.1 114 78.9
Hma1.2p1_2966F.1_g330980 Hydrangea macrophylla HOM05D003133 ORTHO05D003642 7.7e-48 194.1 114 78.9
Nitab4.5_0003441g0130 Nicotiana tabacum HOM05D003133 ORTHO05D003642 7.7e-48 194.1 114 78.9
Peaxi162Scf00119g00083 Petunia axillaris HOM05D003133 ORTHO05D003642 7.7e-48 194.1 114 79.8
PGSC0003DMG400012210 Solanum tuberosum HOM05D003133 ORTHO05D003642 1.0e-47 193.7 114 78.9
CiPaw.11G135600 Carya illinoinensis HOM05D003133 ORTHO05D003642 1.3e-47 193.4 114 79.8
Dinv37643 Davidia involucrata HOM05D003133 ORTHO05D003642 1.3e-47 193.4 114 79.8
Eucgr.D01848 Eucalyptus grandis HOM05D003133 ORTHO05D003642 1.3e-47 193.4 114 79.8
Nitab4.5_0010612g0020 Nicotiana tabacum HOM05D003133 ORTHO05D003642 1.3e-47 193.4 114 78.9
Potri.001G104500 Populus trichocarpa HOM05D003133 ORTHO05D003642 1.3e-47 193.4 114 79.8
Prupe.5G099700 Prunus persica HOM05D003133 ORTHO05D003642 1.7e-47 193.0 114 78.9
HanXRQChr06g0165551 Helianthus annuus HOM05D003133 ORTHO05D003642 2.9e-47 192.2 114 78.1
Lj2A192G38 Lonicera japonica HOM05D003133 ORTHO05D003642 2.9e-47 192.2 114 78.1
MBI18_g34593_MAGBIO Magnolia biondii HOM05D003133 ORTHO05D003642 2.9e-47 192.2 114 78.9
Manes.02G022200 Manihot esculenta HOM05D003133 ORTHO05D003642 2.9e-47 192.2 114 78.1
QL12p033200 Quercus lobata HOM05D003133 ORTHO05D003642 2.9e-47 192.2 114 78.9
Sabra03G0090000 Salix brachista HOM05D003133 ORTHO05D003642 2.9e-47 192.2 114 78.9
TAR629G0119 Trochodendron aralioides HOM05D003133 ORTHO05D003642 2.9e-47 192.2 114 78.1
MD14G1104000 Malus domestica HOM05D003133 ORTHO05D003642 3.8e-47 191.8 114 78.9
TWI15G0789 Tripterygium wilfordii HOM05D003133 ORTHO05D003642 5.0e-47 191.4 114 78.1
Aqoxy7G00341 Aquilegia oxysepala HOM05D003133 ORTHO05D003642 6.5e-47 191.0 114 78.9
CAN.G774.27 Capsicum annuum HOM05D003133 ORTHO05D003642 8.5e-47 190.7 114 76.3
Ciclev10019696m.g Citrus clementina HOM05D003133 ORTHO05D003642 8.5e-47 190.7 114 78.1
MELO3C005674.2 Cucumis melo HOM05D003133 ORTHO05D003642 1.1e-46 190.3 114 76.3
CsaV3_5G002830 Cucumis sativus L. HOM05D003133 ORTHO05D003642 1.1e-46 190.3 114 76.3
Nn6g33441 Nelumbo nucifera HOM05D003133 ORTHO05D003642 1.1e-46 190.3 114 78.1
Nn6g33461 Nelumbo nucifera HOM05D003133 ORTHO05D003642 1.1e-46 190.3 114 78.1
Potri.003G126900 Populus trichocarpa HOM05D003133 ORTHO05D003642 1.1e-46 190.3 114 78.1
PGR031G1439 Punica granatum HOM05D003133 ORTHO05D003642 1.1e-46 190.3 114 77.2
RcHm_v2.0_Chr7g0197771 Rosa chinensis HOM05D003133 ORTHO05D003642 1.1e-46 190.3 114 78.1
CiPaw.12G093500 Carya illinoinensis HOM05D003133 ORTHO05D003642 1.4e-46 189.9 114 78.1
CDE09G0774 Ceratophyllum demersum HOM05D003133 ORTHO05D003642 1.9e-46 189.5 114 78.1
CDE11G0240 Ceratophyllum demersum HOM05D003133 ORTHO05D003642 1.9e-46 189.5 114 78.1
Ca_17536_v3 Cicer arietinum L. HOM05D003133 ORTHO05D003642 1.9e-46 189.5 113 78.8
vmacro11331 Vaccinium macrocarpon HOM05D003133 ORTHO05D003642 1.9e-46 189.5 114 78.1
Zm00001eb264980 Zea mays HOM05D003133 ORTHO05D003642 1.9e-46 189.5 114 78.1
CANSAT21G0409 Cannabis sativa HOM05D003133 ORTHO05D003642 2.5e-46 189.1 114 77.2
COL.COLO4_34458 Corchorus olitorius HOM05D003133 ORTHO05D003642 2.5e-46 189.1 113 78.8
FAN04G0830 Fragaria x ananassa HOM05D003133 ORTHO05D003642 2.5e-46 189.1 114 77.2
FAN08G3005 Fragaria x ananassa HOM05D003133 ORTHO05D003642 2.5e-46 189.1 114 77.2
FAN13G1971 Fragaria x ananassa HOM05D003133 ORTHO05D003642 2.5e-46 189.1 114 77.2
Lsat_1_v5_gn_1_34361 Lactuca sativa HOM05D003133 ORTHO05D003642 2.5e-46 189.1 114 77.2
MD06G1082500 Malus domestica HOM05D003133 ORTHO05D003642 2.5e-46 189.1 114 78.1
Os07g0462000 Oryza sativa ssp. japonica HOM05D003133 ORTHO05D003642 2.5e-46 189.1 114 78.9
PSO017G2538 Papaver somniferum HOM05D003133 ORTHO05D003642 2.5e-46 189.1 114 77.2
PSO063G0727 Papaver somniferum HOM05D003133 ORTHO05D003642 2.5e-46 189.1 114 77.2
MSTRG.13837 Avicennia marina HOM05D003133 ORTHO05D003642 3.2e-46 188.7 114 77.2
Cfa012177 Carpinus fangiana HOM05D003133 ORTHO05D003642 3.2e-46 188.7 114 77.2
Haze_08845 Corylus avellana HOM05D003133 ORTHO05D003642 3.2e-46 188.7 114 77.2
FvH4_5g02350 Fragaria vesca HOM05D003133 ORTHO05D003642 3.2e-46 188.7 114 77.2
FAN18G2670 Fragaria x ananassa HOM05D003133 ORTHO05D003642 3.2e-46 188.7 114 77.2
Medtr8g098350 Medicago truncatula HOM05D003133 ORTHO05D003642 3.2e-46 188.7 113 78.8
Gohir.A09G192401 Gossypium hirsutum HOM05D003133 ORTHO05D003642 4.2e-46 188.3 113 78.8
Lalb_Chr05g0224791 Lupinus albus HOM05D003133 ORTHO05D003642 4.2e-46 188.3 114 76.3
Sabra01G0079200 Salix brachista HOM05D003133 ORTHO05D003642 4.2e-46 188.3 114 77.2
Thecc.03G278200 Theobroma cacao HOM05D003133 ORTHO05D003642 5.5e-46 188.0 113 77.9
ECA246G1277 Erigeron canadensis HOM05D003133 ORTHO05D003642 7.2e-46 187.6 114 75.4
HanXRQChr17g0533681 Helianthus annuus HOM05D003133 ORTHO05D003642 7.2e-46 187.6 114 77.2
SalBow7G4504 Salvia bowleyana HOM05D003133 ORTHO05D003642 7.2e-46 187.6 114 76.3
SGA_v2.0_scaffold173G39193 Striga asiatica HOM05D003133 ORTHO05D003642 7.2e-46 187.6 114 77.2
TPR.G12862 Trifolium pratense HOM05D003133 ORTHO05D003642 7.2e-46 187.6 113 77.9
Os05g0129000 Oryza sativa ssp. japonica HOM05D003133 ORTHO05D003642 9.4e-46 187.2 114 77.2
Zm00001eb354890 Zea mays HOM05D003133 ORTHO05D003642 9.4e-46 187.2 114 77.2
Gohir.D09G186600 Gossypium hirsutum HOM05D003133 ORTHO05D003642 1.2e-45 186.8 113 77.9
Gorai.006G209400 Gossypium raimondii HOM05D003133 ORTHO05D003642 1.2e-45 186.8 113 77.9
GSVIVG01019757001 Vitis vinifera HOM05D003133 ORTHO05D003642 1.2e-45 186.8 114 76.3
Hund14791 Selenicereus undatus HOM05D003133 ORTHO05D003642 1.6e-45 186.4 114 76.3
TWI81G1077 Tripterygium wilfordii HOM05D003133 ORTHO05D003642 1.6e-45 186.4 114 77.2
Psat7g033480 Pisum sativum HOM05D003133 ORTHO05D003642 2.7e-45 185.7 113 76.1
Sed0025899 Sechium edule HOM05D003133 ORTHO05D003642 2.7e-45 185.7 114 74.6
Ah.12g056970 Amaranthus hybridus HOM05D003133 ORTHO05D003642 3.6e-45 185.3 113 75.2
Nn1g01499 Nelumbo nucifera HOM05D003133 ORTHO05D003642 3.6e-45 185.3 113 77.9
Oeu009160.2 Olea europaea HOM05D003133 ORTHO05D003642 3.6e-45 185.3 114 76.3
Hund11475 Selenicereus undatus HOM05D003133 ORTHO05D003642 3.6e-45 185.3 113 77.0
Lj4g0013021 Lotus japonicus HOM05D003133 ORTHO05D003642 4.7e-45 184.9 113 77.0
Cc08_g14690 Coffea canephora HOM05D003133 ORTHO05D003642 6.1e-45 184.5 114 74.6
Duzib084G0978 Durio zibethinus HOM05D003133 ORTHO05D003642 6.1e-45 184.5 113 77.0
arahy.Tifrunner.gnm1.ann1.W25JQA Arachis hypogaea HOM05D003133 ORTHO05D003642 7.9e-45 184.1 113 75.2
AUR62003405 Chenopodium quinoa HOM05D003133 ORTHO05D003642 7.9e-45 184.1 114 74.6
AUR62017210 Chenopodium quinoa HOM05D003133 ORTHO05D003642 7.9e-45 184.1 114 74.6
arahy.Tifrunner.gnm1.ann1.WBB0SP Arachis hypogaea HOM05D003133 ORTHO05D003642 1.0e-44 183.7 112 75.9
THA.LOC104806388 Tarenaya hassleriana HOM05D003133 ORTHO05D003642 1.8e-44 183.0 113 76.1
ClCG01G002740 Citrullus lanatus HOM05D003133 ORTHO05D003642 3.0e-44 182.2 114 73.7
HPP92_015162 Vanilla planifolia HOM05D003133 ORTHO05D003642 3.0e-44 182.2 114 74.6
SalBow8G3631 Salvia bowleyana HOM05D003133 ORTHO05D003642 3.9e-44 181.8 109 76.1
EL10Ac5g13059 Beta vulgaris HOM05D003133 ORTHO05D003642 5.2e-44 181.4 113 73.5
Migut.A00769 Erythranthe guttata HOM05D003133 ORTHO05D003642 5.2e-44 181.4 114 74.6
Lalb_Chr09g0333371 Lupinus albus HOM05D003133 ORTHO05D003642 5.2e-44 181.4 113 74.3
Glyma.05G207600 Glycine max HOM05D003133 ORTHO05D003642 6.7e-44 181.0 113 74.3
Glyma.08G014300 Glycine max HOM05D003133 ORTHO05D003642 2.0e-43 179.5 113 73.5
Sc22g0005610 Simmondsia chinensis HOM05D003133 ORTHO05D003642 2.0e-43 179.5 114 73.7
DCAR_004635 Daucus carota HOM05D003133 ORTHO05D003642 2.6e-43 179.1 113 72.6
Aa31LG6G5160 Aethionema arabicum HOM05D003133 ORTHO05D003642 3.3e-43 178.7 113 72.6
BcaB03g11757 Brassica carinata HOM05D003133 ORTHO05D003642 3.3e-43 178.7 113 72.6
BcaNung03247 Brassica carinata HOM05D003133 ORTHO05D003642 3.3e-43 178.7 113 72.6
A03p54030 Brassica napus HOM05D003133 ORTHO05D003642 3.3e-43 178.7 113 72.6
C07p52450 Brassica napus HOM05D003133 ORTHO05D003642 3.3e-43 178.7 113 72.6
BraA03t14471Z Brassica rapa HOM05D003133 ORTHO05D003642 3.3e-43 178.7 113 72.6
CARHR230180 Cardamine hirsuta HOM05D003133 ORTHO05D003642 3.3e-43 178.7 113 72.6
Thhalv10024916m.g Eutrema salsugineum HOM05D003133 ORTHO05D003642 3.3e-43 178.7 113 72.6
Phvul.002G289200 Phaseolus vulgaris HOM05D003133 ORTHO05D003642 4.4e-43 178.3 113 73.5
THA.LOC104814473 Tarenaya hassleriana HOM05D003133 ORTHO05D003642 4.4e-43 178.3 113 73.5
BcaNung01474 Brassica carinata HOM05D003133 ORTHO05D003642 5.7e-43 177.9 113 72.6
BolC7t45742H Brassica oleracea HOM05D003133 ORTHO05D003642 5.7e-43 177.9 113 72.6
VMungo0251G3225 Vigna mungo HOM05D003133 ORTHO05D003642 5.7e-43 177.9 113 73.5
AL7G30380 Arabidopsis lyrata HOM05D003133 ORTHO05D003642 7.4e-43 177.6 113 72.6
AT4G23100 Arabidopsis thaliana HOM05D003133 ORTHO05D003642 7.4e-43 177.6 113 72.6
Sp7g21160 Schrenkiella parvula HOM05D003133 ORTHO05D003642 9.7e-43 177.2 113 71.7
BcaC09g51026 Brassica carinata HOM05D003133 ORTHO05D003642 2.2e-42 176.0 113 70.8
C01p17720 Brassica napus HOM05D003133 ORTHO05D003642 2.2e-42 176.0 113 70.8
BolC1t01707H Brassica oleracea HOM05D003133 ORTHO05D003642 2.2e-42 176.0 113 70.8
A01p14400 Brassica napus HOM05D003133 ORTHO05D003642 2.8e-42 175.6 114 71.9
BraA01t01385Z Brassica rapa HOM05D003133 ORTHO05D003642 2.8e-42 175.6 114 71.9
Carub.0007s1815 Capsella rubella HOM05D003133 ORTHO05D003642 2.8e-42 175.6 113 70.8
AagrBONN_evm.TU.Sc2ySwM_228.1870 Anthoceros agrestis HOM05D003133 ORTHO05D003642 3.7e-42 175.3 113 71.7
BcaNung00995 Brassica carinata HOM05D003133 ORTHO05D003642 3.7e-42 175.3 113 70.8
Mapoly0043s0124 Marchantia polymorpha HOM05D003133 ORTHO05D003642 4.8e-42 174.9 113 72.6
SMO353G0160 Selaginella moellendorffii HOM05D003133 ORTHO05D003642 1.1e-41 173.7 113 69.9
Pp3c1_34800 Physcomitrium patens HOM05D003133 ORTHO05D003642 1.8e-41 172.9 114 69.3
Pp3c2_1270 Physcomitrium patens HOM05D003133 ORTHO05D003642 7.0e-41 171.0 113 69.9
Hma1.2p1_0792F.1_g218580 Hydrangea macrophylla HOM05D003133 ORTHO05D003642 2.6e-40 169.1 98 78.6
Oeu011047.1 Olea europaea HOM05D003133 ORTHO05D003642 2.2e-39 166.0 161 55.3
LjContig00312_ERROPOS870357g0003358 Lotus japonicus HOM05D003133 ORTHO05D003642 2.9e-39 165.6 112 68.8
Glyma.01G219900 Glycine max HOM05D003133 ORTHO05D003642 6.5e-39 164.5 113 69.0
Lalb_Chr09g0320991 Lupinus albus HOM05D003133 ORTHO05D003642 6.5e-39 164.5 111 69.4
Prupe.5G099600 Prunus persica HOM05D003133 ORTHO05D003642 6.5e-39 164.5 113 67.3
Cpa.g.sc74.44 Carica papaya HOM05D003133 ORTHO05D003642 1.9e-38 162.9 100 76.0
SEGI_21135 Sequoiadendron giganteum HOM05D003133 ORTHO05D003642 3.2e-38 162.2 100 74.0
Cfa012179 Carpinus fangiana HOM05D003133 ORTHO05D003642 7.2e-38 161.0 113 65.5
QL07p017350 Quercus lobata HOM05D003133 ORTHO05D003642 7.2e-38 161.0 112 67.9
Medtr5g010250 Medicago truncatula HOM05D003133 ORTHO05D003642 2.1e-37 159.5 112 67.0
Cfa012180 Carpinus fangiana HOM05D003133 ORTHO05D003642 2.7e-37 159.1 113 67.3
TPR.G6641 Trifolium pratense HOM05D003133 ORTHO05D003642 2.7e-37 159.1 112 67.9
Phvul.002G157600 Phaseolus vulgaris HOM05D003133 ORTHO05D003642 1.0e-36 157.1 113 65.5
VMungo1215G2488 Vigna mungo HOM05D003133 ORTHO05D003642 1.0e-36 157.1 113 65.5
SHI07126 Sapria himalayana HOM05D003133 ORTHO05D003642 6.7e-36 154.5 114 67.5
CBR_g17908 Chara braunii HOM05D003133 ORTHO05D003642 1.2e-35 153.7 114 62.3
SMO143G0252 Selaginella moellendorffii HOM05D003133 ORTHO05D003642 2.6e-35 152.5 113 61.9
PRCOL_00004592 Prasinoderma coloniale HOM05D003133 ORTHO05D003642 9.7e-35 150.6 113 59.3
AL7G30390 Arabidopsis lyrata HOM05D003133 ORTHO05D003642 1.8e-33 146.4 112 60.7
Actinidia14558 Actinidia chinensis HOM05D003133 ORTHO05D003642 3.1e-33 145.6 114 64.0
A03p54020 Brassica napus HOM05D003133 ORTHO05D003642 3.1e-33 145.6 113 60.2
BraA03t14470Z Brassica rapa HOM05D003133 ORTHO05D003642 3.1e-33 145.6 113 60.2
Cre02.g077100 Chlamydomonas reinhardtii HOM05D003133 ORTHO05D003642 5.3e-33 144.8 115 60.0
BcaNung01476 Brassica carinata HOM05D003133 ORTHO05D003642 1.2e-32 143.7 113 59.3
C07p52420 Brassica napus HOM05D003133 ORTHO05D003642 1.2e-32 143.7 113 59.3
BolC7t45737H Brassica oleracea HOM05D003133 ORTHO05D003642 1.2e-32 143.7 113 59.3
AL5G13020 Arabidopsis lyrata HOM05D003133 ORTHO05D003642 2.0e-32 142.9 113 58.4
BcaNung03246 Brassica carinata HOM05D003133 ORTHO05D003642 2.0e-32 142.9 112 58.9
C03p84590 Brassica napus HOM05D003133 ORTHO05D003642 5.9e-32 141.4 113 60.2
BolC3t20748H Brassica oleracea HOM05D003133 ORTHO05D003642 5.9e-32 141.4 113 60.2
Carub.0007s2982 Capsella rubella HOM05D003133 ORTHO05D003642 5.9e-32 141.4 112 57.1
unitig_88.g27613 Utricularia gibba HOM05D003133 ORTHO05D003642 1.3e-31 140.2 114 60.5
MD07G1036400 Malus domestica HOM05D003133 ORTHO05D003642 2.2e-31 139.4 119 56.3
MCO14G076 Micromonas commoda HOM05D003133 ORTHO05D003642 2.5e-30 136.0 113 57.5
Duzib068G0542 Durio zibethinus HOM05D003133 ORTHO05D003642 3.6e-29 132.1 131 54.2
DCAR_004633 Daucus carota HOM05D003133 ORTHO05D003642 8.0e-29 131.0 83 74.7
Manes.01G061500 Manihot esculenta HOM05D003133 ORTHO05D003642 4.0e-28 128.6 113 59.3
Rhsim02G0230100 Rhododendron simsii HOM05D003133 ORTHO05D003642 3.7e-26 122.1 58 89.7
Pp3c22_12540 Physcomitrium patens HOM05D003133 ORTHO05D003642 4.8e-26 121.7 123 52.0
Haze_08840 Corylus avellana HOM05D003133 ORTHO05D003642 5.4e-25 118.2 83 67.5
arahy.Tifrunner.gnm1.ann1.Y73929 Arachis hypogaea HOM05D003133 ORTHO05D003642 7.0e-25 117.9 84 67.9
Glyma.11G023566 Glycine max HOM05D003133 ORTHO05D003642 2.7e-24 115.9 76 68.4
Haze_08839 Corylus avellana HOM05D003133 ORTHO05D003642 3.8e-23 112.1 84 64.3
Ca_24552_v3 Cicer arietinum L. HOM05D003133 ORTHO05D003642 7.2e-22 107.8 108 50.0
ATR0680G192 Amborella trichopoda HOM05D003133 ORTHO05D003642 3.6e-21 105.5 82 59.8
BcaC01g00811 Brassica carinata HOM05D003133 ORTHO05D003642 8.0e-21 104.4 113 50.4
TPR.G421 Trifolium pratense HOM05D003133 ORTHO05D003642 1.6e-16 90.1 103 48.5
TPR.G30225 Trifolium pratense HOM05D003133 ORTHO05D003642 2.3e-15 86.3 106 47.2
Atru.chr9.2197 Acer truncatum HOM05D003133 ORTHO05D003642 1.9e-14 83.2 59 69.5
AUR62010673 Chenopodium quinoa HOM05D003133 ORTHO05D003642 1.6e-08 63.5 31 83.9


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