Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_37223 Corchorus olitorius HOM05D007062 ORTHO05D008941 8.6e-57 223.4 111 100.0
QL12p014002 Quercus lobata HOM05D007062 ORTHO05D008941 5.4e-51 204.1 110 88.2
Hma1.2p1_1691F.1_g297810 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 6.6e-49 197.2 105 89.5
Eucgr.D02028 Eucalyptus grandis HOM05D007062 ORTHO05D008941 7.3e-48 193.7 107 86.9
Sabra03G0078200 Salix brachista HOM05D007062 ORTHO05D008941 1.2e-45 186.4 111 83.8
FAN04G1528 Fragaria x ananassa HOM05D007062 ORTHO05D008941 4.9e-44 181.0 111 79.3
Peaxi162Scf00002g00075 Petunia axillaris HOM05D007062 ORTHO05D008941 8.4e-44 180.3 97 90.7
CAN.G1217.21 Capsicum annuum HOM05D007062 ORTHO05D008941 1.9e-43 179.1 95 90.5
Aa31LG1G2430 Aethionema arabicum HOM05D007062 ORTHO05D008941 2.4e-43 178.7 108 81.5
CsaV3_5G003940 Cucumis sativus L. HOM05D007062 ORTHO05D008941 4.2e-43 177.9 90 93.3
Migut.A00806 Erythranthe guttata HOM05D007062 ORTHO05D008941 4.2e-43 177.9 97 89.7
AUR62007471 Chenopodium quinoa HOM05D007062 ORTHO05D008941 5.4e-43 177.6 97 86.6
Potri.003G112900 Populus trichocarpa HOM05D007062 ORTHO05D008941 9.3e-43 176.8 90 94.4
ATR0568G204 Amborella trichopoda HOM05D007062 ORTHO05D008941 1.2e-42 176.4 94 90.4
FAN13G1422 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.2e-42 176.4 111 79.3
ClCG01G003790 Citrullus lanatus HOM05D007062 ORTHO05D008941 2.7e-42 175.3 90 92.2
MELO3C005562.2 Cucumis melo HOM05D007062 ORTHO05D008941 2.7e-42 175.3 90 92.2
Cpa.g.sc29.119 Carica papaya HOM05D007062 ORTHO05D008941 6.0e-42 174.1 90 92.2
CiPaw.12G106400 Carya illinoinensis HOM05D007062 ORTHO05D008941 1.0e-41 173.3 88 92.0
AUR62039929 Chenopodium quinoa HOM05D007062 ORTHO05D008941 1.0e-41 173.3 97 84.5
AUR62043761 Chenopodium quinoa HOM05D007062 ORTHO05D008941 1.0e-41 173.3 97 84.5
Duzib205G0297 Durio zibethinus HOM05D007062 ORTHO05D008941 1.0e-41 173.3 87 95.4
PGSC0003DMG400004788 Solanum tuberosum HOM05D007062 ORTHO05D008941 1.3e-41 172.9 94 88.3
ECA232G1654 Erigeron canadensis HOM05D007062 ORTHO05D008941 3.9e-41 171.4 94 87.2
Atru.chr9.1388 Acer truncatum HOM05D007062 ORTHO05D008941 8.7e-41 170.2 88 92.0
Lalb_Chr16g0379721 Lupinus albus HOM05D007062 ORTHO05D008941 8.7e-41 170.2 90 88.9
EL10Ac5g13006 Beta vulgaris HOM05D007062 ORTHO05D008941 1.5e-40 169.5 107 79.4
Gohir.D08G190800 Gossypium hirsutum HOM05D007062 ORTHO05D008941 1.5e-40 169.5 86 94.2
Thecc.03G257500 Theobroma cacao HOM05D007062 ORTHO05D008941 2.5e-40 168.7 84 96.4
CSS0025302 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 3.3e-40 168.3 88 89.8
CSS0040813 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 3.3e-40 168.3 88 89.8
Prupe.5G075900 Prunus persica HOM05D007062 ORTHO05D008941 4.3e-40 167.9 87 90.8
arahy.Tifrunner.gnm1.ann1.06MV4V Arachis hypogaea HOM05D007062 ORTHO05D008941 5.6e-40 167.5 88 88.6
arahy.Tifrunner.gnm1.ann1.FU46H2 Arachis hypogaea HOM05D007062 ORTHO05D008941 5.6e-40 167.5 88 88.6
Solyc08g079110.4 Solanum lycopersicum HOM05D007062 ORTHO05D008941 5.6e-40 167.5 90 88.9
Ciclev10021545m.g Citrus clementina HOM05D007062 ORTHO05D008941 7.3e-40 167.2 88 90.9
Glyma.11G030700 Glycine max HOM05D007062 ORTHO05D008941 7.3e-40 167.2 88 88.6
Manes.01G076100 Manihot esculenta HOM05D007062 ORTHO05D008941 7.3e-40 167.2 87 89.7
Sopen08g027570 Solanum pennellii HOM05D007062 ORTHO05D008941 7.3e-40 167.2 90 88.9
Gorai.004G200900 Gossypium raimondii HOM05D007062 ORTHO05D008941 9.6e-40 166.8 84 95.2
GSVIVG01001267001 Vitis vinifera HOM05D007062 ORTHO05D008941 1.3e-39 166.4 87 90.8
Nitab4.5_0000993g0090 Nicotiana tabacum HOM05D007062 ORTHO05D008941 1.6e-39 166.0 90 87.8
SalBow6G7097 Salvia bowleyana HOM05D007062 ORTHO05D008941 1.6e-39 166.0 88 89.8
TAR375G0275 Trochodendron aralioides HOM05D007062 ORTHO05D008941 1.6e-39 166.0 88 89.8
Gohir.A08G172400 Gossypium hirsutum HOM05D007062 ORTHO05D008941 2.1e-39 165.6 84 94.0
vmacro05405 Vaccinium macrocarpon HOM05D007062 ORTHO05D008941 2.8e-39 165.2 94 84.0
VMungo1215G0274 Vigna mungo HOM05D007062 ORTHO05D008941 3.6e-39 164.9 88 87.5
Sed0027513 Sechium edule HOM05D007062 ORTHO05D008941 4.8e-39 164.5 86 90.7
Hma1.2p1_1691F.1_g297800 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 6.2e-39 164.1 85 88.2
Phvul.002G061100 Phaseolus vulgaris HOM05D007062 ORTHO05D008941 6.2e-39 164.1 89 86.5
Nitab4.5_0005649g0010 Nicotiana tabacum HOM05D007062 ORTHO05D008941 1.1e-38 163.3 90 86.7
PSO782G2909 Papaver somniferum HOM05D007062 ORTHO05D008941 1.4e-38 162.9 103 78.6
RcHm_v2.0_Chr7g0202221 Rosa chinensis HOM05D007062 ORTHO05D008941 1.8e-38 162.5 87 87.4
TPR.G25898 Trifolium pratense HOM05D007062 ORTHO05D008941 1.8e-38 162.5 87 87.4
Cc08_g12960 Coffea canephora HOM05D007062 ORTHO05D008941 2.4e-38 162.2 87 87.4
Os02g0643500 Oryza sativa ssp. japonica HOM05D007062 ORTHO05D008941 3.1e-38 161.8 87 87.4
Sc06g0007370 Simmondsia chinensis HOM05D007062 ORTHO05D008941 3.1e-38 161.8 88 85.2
Zm00001eb248670 Zea mays HOM05D007062 ORTHO05D008941 3.1e-38 161.8 88 86.4
HPP92_003260 Vanilla planifolia HOM05D007062 ORTHO05D008941 5.3e-38 161.0 87 86.2
Ah.02g116970 Amaranthus hybridus HOM05D007062 ORTHO05D008941 9.0e-38 160.2 94 80.9
FvH4_5g00330 Fragaria vesca HOM05D007062 ORTHO05D008941 1.2e-37 159.8 87 86.2
FAN08G1089 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.2e-37 159.8 87 86.2
FAN18G0001 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.2e-37 159.8 87 86.2
Lsat_1_v5_gn_6_2361 Lactuca sativa HOM05D007062 ORTHO05D008941 1.2e-37 159.8 87 86.2
SGA_v2.0_scaffold120G32845 Striga asiatica HOM05D007062 ORTHO05D008941 1.2e-37 159.8 85 89.4
Lj2g0026876 Lotus japonicus HOM05D007062 ORTHO05D008941 1.5e-37 159.5 87 83.9
Hund11577 Selenicereus undatus HOM05D007062 ORTHO05D008941 1.5e-37 159.5 86 86.0
THA.LOC104818475 Tarenaya hassleriana HOM05D007062 ORTHO05D008941 2.0e-37 159.1 87 86.2
BcaC07g41714 Brassica carinata HOM05D007062 ORTHO05D008941 2.6e-37 158.7 88 86.4
BcaC07g42568 Brassica carinata HOM05D007062 ORTHO05D008941 2.6e-37 158.7 88 86.4
A09p63980 Brassica napus HOM05D007062 ORTHO05D008941 2.6e-37 158.7 88 86.4
C08p47500 Brassica napus HOM05D007062 ORTHO05D008941 2.6e-37 158.7 88 86.4
BolC8t52291H Brassica oleracea HOM05D007062 ORTHO05D008941 2.6e-37 158.7 88 86.4
BraA09t41747Z Brassica rapa HOM05D007062 ORTHO05D008941 2.6e-37 158.7 88 86.4
DCAR_004919 Daucus carota HOM05D007062 ORTHO05D008941 2.6e-37 158.7 88 87.5
Thhalv10008422m.g Eutrema salsugineum HOM05D007062 ORTHO05D008941 2.6e-37 158.7 88 86.4
Sp1g10870 Schrenkiella parvula HOM05D007062 ORTHO05D008941 3.4e-37 158.3 87 87.4
AL1G23540 Arabidopsis lyrata HOM05D007062 ORTHO05D008941 5.8e-37 157.5 87 86.2
CDE04G1356 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 5.8e-37 157.5 85 85.9
PSO063G0503 Papaver somniferum HOM05D007062 ORTHO05D008941 5.8e-37 157.5 84 86.9
SEGI_22381 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 5.8e-37 157.5 84 83.3
TWI60G0310 Tripterygium wilfordii HOM05D007062 ORTHO05D008941 5.8e-37 157.5 88 84.1
Actinidia02105 Actinidia chinensis HOM05D007062 ORTHO05D008941 9.9e-37 156.8 86 86.0
HanXRQChr02g0049591 Helianthus annuus HOM05D007062 ORTHO05D008941 9.9e-37 156.8 87 86.2
PGR031G1282 Punica granatum HOM05D007062 ORTHO05D008941 9.9e-37 156.8 84 86.9
Aqoxy5G03933 Aquilegia oxysepala HOM05D007062 ORTHO05D008941 1.3e-36 156.4 80 91.2
AT1G12250 Arabidopsis thaliana HOM05D007062 ORTHO05D008941 2.2e-36 155.6 87 85.1
Carub.0001s1193 Capsella rubella HOM05D007062 ORTHO05D008941 2.2e-36 155.6 87 85.1
MSTRG.25539 Avicennia marina HOM05D007062 ORTHO05D008941 2.9e-36 155.2 85 85.9
CANSAT21G0465 Cannabis sativa HOM05D007062 ORTHO05D008941 3.8e-36 154.8 84 85.7
CARHR012560 Cardamine hirsuta HOM05D007062 ORTHO05D008941 8.4e-36 153.7 85 85.9
Medtr5g012110 Medicago truncatula HOM05D007062 ORTHO05D008941 1.4e-35 152.9 82 85.4
CBR_g19734 Chara braunii HOM05D007062 ORTHO05D008941 2.7e-34 148.7 109 64.2
MD06G1065500 Malus domestica HOM05D007062 ORTHO05D008941 3.9e-33 144.8 88 81.8
Mapoly0083s0077 Marchantia polymorpha HOM05D007062 ORTHO05D008941 4.3e-32 141.4 79 79.7
SMO137G0193 Selaginella moellendorffii HOM05D007062 ORTHO05D008941 4.3e-32 141.4 81 77.8
Pp3c21_17930 Physcomitrium patens HOM05D007062 ORTHO05D008941 3.1e-30 135.2 79 77.2
Glyma.01G211100 Glycine max HOM05D007062 ORTHO05D008941 1.0e-25 120.2 78 76.9
Dinv39100 Davidia involucrata HOM05D007062 ORTHO05D008941 3.0e-17 92.0 74 64.9
AagrBONN_evm.TU.Sc2ySwM_228.1920 Anthoceros agrestis HOM05D000741 ORTHO05D000506 3.8e-12 75.1 43 81.4
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 8.5e-12 73.9 107 48.6
MCO12G419 Micromonas commoda HOM05D007062 ORTHO05D008941 1.6e-10 69.7 44 72.7
SEGI_25676 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 3.3e-08 62.0 54 59.3
Cre17.g721700 Chlamydomonas reinhardtii HOM05D007062 ORTHO05D008941 1.7e-07 59.7 47 57.4
MCO04G309 Micromonas commoda HOM05D007062 ORTHO05D008941 3.7e-07 58.5 53 56.6
Haze_08582 Corylus avellana HOM05D007062 ORTHO05D008941 4.8e-07 58.2 29 96.6


User provided reference genes

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