Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_37044 Corchorus olitorius HOM05D007347 ORTHO05D009296 8.8e-91 337.8 311 100.0
COL.COLO4_23655 Corchorus olitorius HOM05D007347 ORTHO05D009296 4.1e-72 275.8 137 99.3
Atru.chr10.1870 Acer truncatum HOM05D007347 ORTHO05D009296 2.5e-45 186.8 122 73.0
Sed0006376 Sechium edule HOM05D007347 ORTHO05D009296 1.2e-42 177.9 141 62.4
Eucgr.I02100 Eucalyptus grandis HOM05D007347 ORTHO05D009296 9.9e-42 174.9 129 66.7
MD15G1324700 Malus domestica HOM05D007347 ORTHO05D009296 4.6e-39 166.0 135 63.7
Migut.H00560 Erythranthe guttata HOM05D007347 ORTHO05D009296 1.0e-38 164.9 131 61.1
Prupe.6G186200 Prunus persica HOM05D007347 ORTHO05D009296 5.1e-38 162.5 124 62.9
CsaV3_5G013240 Cucumis sativus L. HOM05D007347 ORTHO05D009296 2.5e-37 160.2 132 59.1
MELO3C026797.2 Cucumis melo HOM05D007347 ORTHO05D009296 1.2e-36 157.9 132 57.6
Psat4g145840 Pisum sativum HOM05D007347 ORTHO05D009296 3.1e-35 153.3 112 63.4
Sopen04g021380 Solanum pennellii HOM05D007347 ORTHO05D009296 2.6e-34 150.2 130 53.1
CAN.G71.18 Capsicum annuum HOM05D007347 ORTHO05D009296 3.4e-34 149.8 134 51.5
Solyc04g050550.3 Solanum lycopersicum HOM05D007347 ORTHO05D009296 1.7e-33 147.5 130 52.3
Glyma.15G236300 Glycine max HOM05D007347 ORTHO05D009296 3.8e-33 146.4 107 60.7
SGA_v2.0_scaffold204G41666 Striga asiatica HOM05D007347 ORTHO05D009296 1.9e-32 144.1 127 55.1
CSS0000287 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 6.0e-31 139.0 95 72.6
CSS0049471 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 6.0e-31 139.0 95 72.6
Peaxi162Scf00004g02628 Petunia axillaris HOM05D007347 ORTHO05D009296 1.0e-30 138.3 117 53.8
SGA_v2.0_scaffold4G02364 Striga asiatica HOM05D007347 ORTHO05D009296 8.7e-30 135.2 120 55.0
BcaB06g27240 Brassica carinata HOM05D007347 ORTHO05D009296 3.3e-29 133.3 111 57.7
MSTRG.24902 Avicennia marina HOM05D007347 ORTHO05D009296 5.6e-29 132.5 101 59.4
CDE05G1387 Ceratophyllum demersum HOM05D007347 ORTHO05D009296 3.1e-27 126.7 136 45.6
Medtr8g039270 Medicago truncatula HOM05D007347 ORTHO05D009296 2.0e-26 124.0 92 62.0
DCAR_010986 Daucus carota HOM05D007347 ORTHO05D009296 3.8e-25 119.8 97 56.7
Thecc.04G145700 Theobroma cacao HOM05D007347 ORTHO05D009296 7.1e-24 115.5 59 93.2
Duzib138G0808 Durio zibethinus HOM05D007347 ORTHO05D009296 6.0e-23 112.5 58 94.8
Manes.02G063016 Manihot esculenta HOM05D002460 ORTHO05D002716 1.0e-22 111.7 70 71.4
Dinv34879 Davidia involucrata HOM05D007347 ORTHO05D009296 3.9e-22 109.8 69 76.8
GSVIVG01036486001 Vitis vinifera HOM05D007347 ORTHO05D009296 1.1e-21 108.2 68 76.5
Ciclev10011342m.g Citrus clementina HOM05D007347 ORTHO05D009296 3.3e-21 106.7 70 68.6
Manes.18G103700 Manihot esculenta HOM05D007347 ORTHO05D009296 1.6e-20 104.4 63 74.6
Actinidia18106 Actinidia chinensis HOM05D007347 ORTHO05D009296 2.8e-20 103.6 75 66.7
Lj4P128T51 Lonicera japonica HOM05D007347 ORTHO05D009296 1.4e-19 101.3 73 68.5
ClCG11G001180 Citrullus lanatus HOM05D007347 ORTHO05D009296 1.8e-19 100.9 68 67.6
CARHR264050 Cardamine hirsuta HOM05D007347 ORTHO05D009296 4.0e-19 99.8 69 62.3
MBI03_g44528_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 6.9e-19 99.0 140 40.0
RcHm_v2.0_Chr6g0269561 Rosa chinensis HOM05D007347 ORTHO05D009296 3.4e-18 96.7 68 64.7
Hma1.2p1_1364F.1_g278380 Hydrangea macrophylla HOM05D007347 ORTHO05D009296 5.8e-18 95.9 67 68.7
TAR629G3514 Trochodendron aralioides HOM05D007347 ORTHO05D009296 1.7e-17 94.4 71 63.4
RcHm_v2.0_Chr2g0114451 Rosa chinensis HOM05D007347 ORTHO05D009296 2.9e-17 93.6 69 60.9
Phvul.011G207300 Phaseolus vulgaris HOM05D007347 ORTHO05D009296 3.8e-17 93.2 70 60.0
Lj3g0007423 Lotus japonicus HOM05D007347 ORTHO05D009296 4.9e-17 92.8 73 60.3
CiPaw.03G007800 Carya illinoinensis HOM05D007347 ORTHO05D009296 8.4e-17 92.0 64 67.2
VMungo1127G1072 Vigna mungo HOM05D007347 ORTHO05D009296 1.4e-16 91.3 71 59.2
TAR371G0226 Trochodendron aralioides HOM05D007347 ORTHO05D009296 2.4e-16 90.5 68 63.2
Ah.16g102100 Amaranthus hybridus HOM05D007347 ORTHO05D009296 3.2e-16 90.1 70 55.7
Rhsim10G0062500 Rhododendron simsii HOM05D007347 ORTHO05D009296 5.5e-16 89.4 63 68.3
Nn3g18549 Nelumbo nucifera HOM05D007347 ORTHO05D009296 7.1e-16 89.0 68 60.3
TPR.G30433 Trifolium pratense HOM05D007347 ORTHO05D009296 7.1e-16 89.0 69 55.1
Gohir.D02G204900 Gossypium hirsutum HOM05D007347 ORTHO05D009296 9.3e-16 88.6 56 75.0
Gorai.005G232200 Gossypium raimondii HOM05D007347 ORTHO05D009296 9.3e-16 88.6 56 75.0
Aa31LG9G16920 Aethionema arabicum HOM05D007347 ORTHO05D009296 6.0e-15 85.9 72 51.4
FAN26G2104 Fragaria x ananassa HOM05D007347 ORTHO05D009296 7.9e-15 85.5 63 60.3
QL06p007153 Quercus lobata HOM05D007347 ORTHO05D009296 1.0e-14 85.1 62 64.5
SalBow1G8225 Salvia bowleyana HOM05D007347 ORTHO05D009296 1.8e-14 84.3 73 56.2
Ca_23964_v3 Cicer arietinum L. HOM05D007347 ORTHO05D009296 6.7e-14 82.4 67 55.2
Nitab4.5_0007154g0010 Nicotiana tabacum HOM05D007347 ORTHO05D009296 1.5e-13 81.3 59 59.3
Oeu033427.1 Olea europaea HOM05D007347 ORTHO05D009296 1.5e-13 81.3 68 58.8
Potri.017G108600 Populus trichocarpa HOM05D007347 ORTHO05D009296 1.5e-13 81.3 48 77.1
FvH4_1g20970 Fragaria vesca HOM05D007347 ORTHO05D009296 1.9e-13 80.9 59 61.0
FAN19G1358 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.9e-13 80.9 59 61.0
FAN23G0923 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.9e-13 80.9 59 61.0
Cc07_g04830 Coffea canephora HOM05D007347 ORTHO05D009296 7.4e-13 79.0 72 52.8
Aqoxy3G04330 Aquilegia oxysepala HOM05D007347 ORTHO05D009296 2.1e-12 77.4 69 52.2
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 2.8e-12 77.0 59 52.5
Cpa.g.sc16.131 Carica papaya HOM05D007347 ORTHO05D009296 8.1e-12 75.5 58 58.6
Migut.M00355 Erythranthe guttata HOM05D005973 ORTHO05D007285 8.1e-12 75.5 62 56.5
ATR0124G055 Amborella trichopoda HOM05D007347 ORTHO05D009296 1.1e-11 75.1 92 38.0
SGA_v2.0_scaffold204G41677 Striga asiatica HOM05D007347 ORTHO05D009296 1.8e-11 74.3 147 33.3
HanXRQChr14g0448021 Helianthus annuus HOM05D007347 ORTHO05D009296 4.5e-10 69.7 50 64.0
CANSAT64G0714 Cannabis sativa HOM05D007347 ORTHO05D009296 7.6e-10 68.9 52 57.7
THA.LOC104805542 Tarenaya hassleriana HOM05D007347 ORTHO05D009296 1.7e-09 67.8 47 66.0
Manes.02G063132 Manihot esculenta HOM05D007347 ORTHO05D009296 2.9e-09 67.0 44 68.2
AT5G38730 Arabidopsis thaliana HOM05D007347 ORTHO05D009296 1.2e-07 61.6 47 53.2
Lalb_Chr19g0132391 Lupinus albus HOM05D007347 ORTHO05D009296 7.9e-07 58.9 48 56.2
Lsat_1_v5_gn_2_86161 Lactuca sativa HOM05D007347 ORTHO05D009296 2.3e-06 57.4 44 61.4
Cfa007995 Carpinus fangiana HOM05D007347 ORTHO05D009296 3.9e-06 56.6 38 68.4


User provided reference genes

Program Settings