Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_37025 Corchorus olitorius HOM05D022710 ORTHO05D022428 6.7e-142 507.3 250 100.0
COL.COLO4_33087 Corchorus olitorius HOM05D022710 ORTHO05D022428 2.5e-59 233.0 121 97.5
COL.COLO4_33441 Corchorus olitorius HOM05D022710 ORTHO05D022428 1.0e-49 201.1 105 96.2
Hma1.2p1_2881F.1_g329810 Hydrangea macrophylla HOM05D022710 ORTHO05D022428 4.1e-14 82.8 150 38.0
COL.COLO4_12042 Corchorus olitorius HOM05D022710 ORTHO05D022428 1.1e-11 74.7 37 89.2
Thecc.09G004500 Theobroma cacao HOM05D000010 ORTHO05D000302 1.6e-10 70.9 51 72.5
Hma1.2p1_1184F.1_g264870 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.8e-10 70.1 66 48.5
Sopen09g013450 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-09 66.6 128 34.4
QL03p008741 Quercus lobata HOM05D000002 ORTHO05D000001 7.5e-08 62.0 63 44.4
QL08p032395 Quercus lobata HOM05D000002 ORTHO05D000001 7.5e-08 62.0 63 44.4
QL12p018234 Quercus lobata HOM05D000002 ORTHO05D000001 7.5e-08 62.0 63 44.4
Sopen01g011300 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen01g011990 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen01g026060 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen01g026910 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen01g027080 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen02g004900 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen02g011170 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen02g033300 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen03g016290 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen03g020140 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen04g008130 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen04g020670 Solanum pennellii HOM05D000004 ORTHO05D000002 7.5e-08 62.0 64 50.0
Sopen04g020830 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen04g021700 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen04g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen04g024180 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen04g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen05g008880 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen05g009730 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen05g019310 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen05g021260 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen05g021330 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen05g021420 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen06g017460 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen06g018700 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen07g002540 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen07g025430 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen08g016750 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen08g018380 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen08g018390 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen08g023630 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen09g007040 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen09g007620 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen09g021990 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen09g022710 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen09g028560 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen10g020120 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen10g023070 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen10g028080 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen11g011440 Solanum pennellii HOM05D000004 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen11g014570 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen11g019150 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen11g021970 Solanum pennellii HOM05D000014 ORTHO05D000001 7.5e-08 62.0 64 48.4
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen12g018780 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen12g021260 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen12g023160 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen12g023730 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-08 62.0 64 50.0
Sopen12g032230 Solanum pennellii HOM05D000398 ORTHO05D000551 7.5e-08 62.0 64 50.0
Sopen02g010110 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 61.6 64 50.0
Sopen08g006370 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 61.6 64 50.0
TPR.G12090 Trifolium pratense HOM05D000010 ORTHO05D000302 1.3e-07 61.2 46 63.0
COL.COLO4_18616 Corchorus olitorius HOM05D000010 ORTHO05D000302 1.7e-07 60.8 32 87.5
Sopen01g018110 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-07 60.8 61 50.8
Sopen05g016200 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-07 60.5 63 46.0
Ca_24071_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.8e-07 60.1 64 39.1
Sopen09g015500 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-07 60.1 64 50.0
Sopen10g019420 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-07 60.1 64 45.3
Manes.03G002200 Manihot esculenta HOM05D000010 ORTHO05D000302 3.7e-07 59.7 35 77.1
Oeu059296.1 Olea europaea HOM05D000010 ORTHO05D000302 3.7e-07 59.7 37 73.0
Potri.018G003800 Populus trichocarpa HOM05D000010 ORTHO05D000302 3.7e-07 59.7 40 67.5
PGR042G3178 Punica granatum HOM05D000010 ORTHO05D000302 3.7e-07 59.7 40 72.5
Sopen07g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-07 59.7 64 48.4
Sopen12g018950 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-07 59.7 64 46.9
Gohir.A06G107100 Gossypium hirsutum HOM05D000010 ORTHO05D000302 4.9e-07 59.3 40 72.5
Gohir.D06G109300 Gossypium hirsutum HOM05D000010 ORTHO05D000302 4.9e-07 59.3 40 72.5
Gorai.010G124100 Gossypium raimondii HOM05D000010 ORTHO05D000302 4.9e-07 59.3 40 72.5
MSTRG.11824 Avicennia marina HOM05D000010 ORTHO05D000302 6.3e-07 58.9 40 72.5
Haze_21812 Corylus avellana HOM05D000010 ORTHO05D000302 6.3e-07 58.9 51 54.9
Sopen02g010960 Solanum pennellii HOM05D000002 ORTHO05D000001 6.3e-07 58.9 61 45.9
Duzib168G0631 Durio zibethinus HOM05D000010 ORTHO05D000302 8.3e-07 58.5 30 83.3
Lalb_Chr23g0269341 Lupinus albus HOM05D000010 ORTHO05D000302 8.3e-07 58.5 41 63.4
Peaxi162Scf00213g00119 Petunia axillaris HOM05D000010 ORTHO05D000302 1.1e-06 58.2 30 83.3
Sopen05g028190 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 58.2 75 45.3
Sopen09g026100 Solanum pennellii HOM05D000232 ORTHO05D000001 1.1e-06 58.2 60 45.0
Sopen11g022300 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 58.2 60 45.0
Actinidia06424 Actinidia chinensis HOM05D000010 ORTHO05D000302 1.4e-06 57.8 40 67.5
Medtr1g008740 Medicago truncatula HOM05D000010 ORTHO05D000302 1.4e-06 57.8 50 60.0
CSS0048162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-06 57.4 63 41.3
Cc00_g08040 Coffea canephora HOM05D000010 ORTHO05D000302 1.8e-06 57.4 30 80.0
FvH4_1g15230 Fragaria vesca HOM05D000529 ORTHO05D000472 1.8e-06 57.4 115 33.0
Cfa013323 Carpinus fangiana HOM05D000010 ORTHO05D000302 2.4e-06 57.0 35 74.3
AUR62020634 Chenopodium quinoa HOM05D000010 ORTHO05D000302 2.4e-06 57.0 35 74.3
AUR62038748 Chenopodium quinoa HOM05D000010 ORTHO05D000302 2.4e-06 57.0 35 74.3
Ca_02942_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.4e-06 57.0 56 42.9
FvH4_4g27782 Fragaria vesca HOM05D000002 ORTHO05D000001 2.4e-06 57.0 115 33.0
Glyma.14G140100 Glycine max HOM05D000010 ORTHO05D000302 2.4e-06 57.0 48 62.5
Hma1.2p1_0331F.1_g127560 Hydrangea macrophylla HOM05D000010 ORTHO05D000302 2.4e-06 57.0 31 80.6
Lj1g0018854 Lotus japonicus HOM05D000010 ORTHO05D000302 2.4e-06 57.0 35 77.1
Phvul.001G059900 Phaseolus vulgaris HOM05D000010 ORTHO05D000302 2.4e-06 57.0 50 58.0
Psat6g005880 Pisum sativum HOM05D000010 ORTHO05D000302 2.4e-06 57.0 33 81.8
Rhsim09G0030900 Rhododendron simsii HOM05D000010 ORTHO05D000302 2.4e-06 57.0 29 79.3
EL10Ac2g03712 Beta vulgaris HOM05D000010 ORTHO05D000302 3.1e-06 56.6 35 80.0
QL08p041695 Quercus lobata HOM05D000002 ORTHO05D000001 3.1e-06 56.6 114 31.6
Sabra18G0009400 Salix brachista HOM05D000010 ORTHO05D000302 3.1e-06 56.6 48 58.3
Sopen07g011780 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-06 56.6 60 45.0
Ciclev10008885m.g Citrus clementina HOM05D000010 ORTHO05D000302 4.1e-06 56.2 30 80.0
TAR625G0764 Trochodendron aralioides HOM05D000010 ORTHO05D000302 4.1e-06 56.2 34 73.5
AL4G14860 Arabidopsis lyrata HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
BcaC02g08461 Brassica carinata HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
BcaC07g40933 Brassica carinata HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
A04p18740 Brassica napus HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
A09p56310 Brassica napus HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
C04p54030 Brassica napus HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
C08p39270 Brassica napus HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
BolC4t26955H Brassica oleracea HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
BolC8t51500H Brassica oleracea HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
BraA04t17484Z Brassica rapa HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
BraA09t41026Z Brassica rapa HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
CSS0007612 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-06 55.8 71 36.6
Carub.0004s0378 Capsella rubella HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
CARHR117630 Cardamine hirsuta HOM05D000010 ORTHO05D000302 5.4e-06 55.8 35 74.3
Potri.006G277000 Populus trichocarpa HOM05D000010 ORTHO05D000302 5.4e-06 55.8 40 60.0
VMungo1309G0880 Vigna mungo HOM05D000010 ORTHO05D000302 5.4e-06 55.8 48 62.5
arahy.Tifrunner.gnm1.ann1.332M63 Arachis hypogaea HOM05D000010 ORTHO05D000302 7.0e-06 55.5 56 57.1
CSS0030067 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000302 7.0e-06 55.5 40 67.5
Ca_12824_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000302 7.0e-06 55.5 35 77.1
Nitab4.5_0000919g0050 Nicotiana tabacum HOM05D000010 ORTHO05D000302 7.0e-06 55.5 26 92.3
Sopen09g010810 Solanum pennellii HOM05D000002 ORTHO05D000001 7.0e-06 55.5 116 32.8
THA.LOC104803880 Tarenaya hassleriana HOM05D000010 ORTHO05D000302 7.0e-06 55.5 33 75.8
TAR636G2089 Trochodendron aralioides HOM05D000010 ORTHO05D000302 7.0e-06 55.5 29 82.8
Sabra06G0214700 Salix brachista HOM05D000010 ORTHO05D000302 9.2e-06 55.1 40 62.5
Sopen04g020510 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-06 55.1 50 50.0


User provided reference genes

Program Settings