Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 3.4e-151 538.5 309 100.0
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 3.1e-104 382.5 305 70.5
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 4.5e-95 352.1 312 66.3
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.0e-94 350.9 312 66.0
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 2.1e-92 343.2 311 65.3
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 2.2e-89 333.2 254 73.2
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 1.4e-77 293.9 306 58.2
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 1.8e-75 287.0 303 59.7
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 3.0e-75 286.2 304 57.2
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 8.8e-75 284.6 309 57.6
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 1.6e-71 273.9 307 54.1
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 2.0e-71 273.5 302 56.0
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 2.0e-71 273.5 304 54.9
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 5.0e-70 268.9 304 56.6
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 8.5e-70 268.1 302 55.3
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 3.2e-69 266.2 302 52.3
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 9.4e-69 264.6 307 55.4
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 2.1e-68 263.5 304 54.6
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.3e-65 254.2 312 54.2
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 4.8e-65 252.3 296 51.7
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 8.2e-65 251.5 313 53.0
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 2.4e-64 250.0 306 50.3
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 9.1e-64 248.1 297 53.5
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 3.5e-63 246.1 222 62.2
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 4.5e-63 245.7 310 51.6
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 7.7e-63 245.0 303 51.5
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 7.7e-63 245.0 305 51.1
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 1.7e-62 243.8 305 50.8
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 8.5e-62 241.5 318 49.4
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.1e-61 241.1 243 57.6
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 1.1e-61 241.1 304 50.3
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 4.2e-61 239.2 308 51.3
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 5.5e-61 238.8 239 58.6
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 7.2e-61 238.4 359 45.1
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 9.4e-61 238.0 316 51.3
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 1.2e-60 237.7 311 49.8
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 2.7e-60 236.5 319 48.9
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 4.7e-60 235.7 204 64.7
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 1.0e-59 234.6 317 48.9
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 1.0e-59 234.6 309 50.5
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.4e-59 234.2 318 46.9
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 1.4e-59 234.2 303 49.2
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 3.0e-59 233.0 317 48.6
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 5.2e-59 232.3 304 51.6
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 6.8e-59 231.9 314 48.1
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 1.2e-58 231.1 303 50.5
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 1.5e-58 230.7 299 51.5
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 9.8e-58 228.0 314 47.8
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 3.7e-57 226.1 306 49.3
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 4.8e-57 225.7 309 50.2
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 8.3e-57 224.9 240 59.6
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 2.4e-56 223.4 312 47.8
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 2.4e-56 223.4 251 55.8
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 3.1e-56 223.0 308 46.8
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 7.0e-56 221.9 310 49.7
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 1.2e-55 221.1 305 50.8
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 1.6e-55 220.7 318 45.6
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 3.5e-55 219.5 322 46.6
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 4.5e-55 219.2 247 53.8
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 5.9e-55 218.8 305 47.2
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 7.7e-55 218.4 388 43.3
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 2.2e-54 216.9 304 49.0
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 2.9e-54 216.5 281 48.8
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 2.9e-54 216.5 315 45.4
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 2.9e-54 216.5 312 46.5
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 6.5e-54 215.3 311 48.2
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 8.5e-54 214.9 311 47.6
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 3.2e-53 213.0 277 49.8
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 3.2e-53 213.0 215 57.2
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 4.2e-53 212.6 300 47.3
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 9.4e-53 211.5 237 56.5
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 1.6e-52 210.7 337 43.9
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 2.1e-52 210.3 235 53.6
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 2.7e-52 209.9 243 52.3
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 3.6e-52 209.5 319 44.8
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 3.6e-52 209.5 246 54.1
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 4.7e-52 209.1 249 51.8
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 8.0e-52 208.4 240 52.5
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 1.0e-51 208.0 220 57.7
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.4e-51 207.6 303 48.2
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 1.4e-51 207.6 233 56.7
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 4.0e-51 206.1 215 55.8
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 1.5e-50 204.1 351 42.2
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 1.5e-50 204.1 306 46.1
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 2.0e-50 203.8 237 52.7
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 5.7e-50 202.2 221 55.2
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 4.9e-49 199.1 242 51.7
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 7.0e-48 195.3 222 54.5
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 1.2e-47 194.5 218 54.6
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 4.5e-47 192.6 246 52.0
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 6.6e-46 188.7 194 60.3
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 1.2e-44 184.5 207 55.1
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 2.1e-44 183.7 196 58.2
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 1.5e-42 177.6 203 55.7
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.6e-42 176.8 214 51.9
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 5.7e-42 175.6 321 41.4
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 3.7e-41 172.9 187 56.7
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 5.0e-38 162.5 308 42.2
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.6e-36 157.5 285 40.4
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.2e-26 124.8 225 42.7
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 5.8e-26 122.5 210 40.5
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 1.2e-23 114.8 215 37.7
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 8.6e-22 108.6 147 47.6
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.9e-21 107.5 139 48.9
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 2.1e-20 104.0 226 31.0
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 5.4e-16 89.4 126 47.6
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 1.6e-15 87.8 62 67.7
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 6.0e-15 85.9 127 47.2
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 6.0e-15 85.9 125 47.2
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 6.2e-12 75.9 157 41.4
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 8.1e-12 75.5 94 53.2
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 1.4e-11 74.7 128 37.5
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 5.2e-11 72.8 107 37.4
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 8.9e-11 72.0 74 59.5
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 1.3e-09 68.2 98 43.9
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.2e-09 67.4 50 66.0
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 9.3e-08 62.0 43 76.7
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 1.3e-06 58.2 228 27.6


User provided reference genes

Program Settings