Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 7.2e-298 1026.5 545 100.0
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 2.4e-245 852.0 642 74.8
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 2.0e-215 752.7 613 66.1
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 2.1e-212 742.7 615 68.1
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 8.2e-193 677.6 594 64.5
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 1.6e-183 646.7 594 60.9
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 1.8e-179 633.3 594 58.8
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 3.3e-178 629.0 591 57.5
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 9.7e-178 627.5 613 59.2
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 1.1e-176 624.0 619 56.4
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 1.3e-174 617.1 612 59.3
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 5.0e-174 615.1 614 58.1
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 5.0e-174 615.1 609 59.4
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 6.1e-172 608.2 645 54.4
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 2.3e-171 606.3 604 55.8
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 2.4e-168 596.3 566 56.7
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 2.3e-166 589.7 577 56.0
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 2.3e-166 589.7 559 57.6
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 2.9e-166 589.3 616 55.5
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 1.9e-165 586.6 619 55.7
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 2.5e-165 586.3 613 54.5
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 3.3e-165 585.9 614 53.6
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 1.6e-164 583.6 616 53.2
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 4.7e-164 582.0 578 54.3
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 6.1e-164 581.6 608 53.5
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 2.3e-163 579.7 596 55.4
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 3.0e-163 579.3 615 51.5
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 3.0e-163 579.3 592 54.4
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 3.0e-163 579.3 561 58.1
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 4.0e-163 578.9 563 55.6
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 5.2e-163 578.6 567 57.8
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 1.5e-162 577.0 553 55.5
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 2.0e-162 576.6 567 55.7
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 3.4e-162 575.9 580 53.8
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 7.5e-162 574.7 633 54.2
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 1.3e-161 573.9 558 55.2
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 1.3e-161 573.9 520 58.7
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 1.7e-161 573.5 562 55.2
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 2.8e-161 572.8 593 55.1
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 3.7e-161 572.4 601 54.9
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 8.3e-161 571.2 562 55.3
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 2.4e-160 569.7 628 55.7
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.4e-160 569.7 606 54.3
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 3.1e-160 569.3 562 54.8
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 7.0e-160 568.2 644 50.3
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 1.2e-159 567.4 604 56.3
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 2.7e-159 566.2 608 53.0
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 5.9e-159 565.1 562 57.1
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.0e-158 564.3 617 56.2
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 1.1e-157 560.8 551 57.5
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.9e-157 560.1 617 55.8
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 2.5e-157 559.7 611 50.2
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 4.7e-156 555.4 559 56.9
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 8.0e-156 554.7 574 57.7
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 5.2e-155 552.0 567 55.7
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 6.8e-155 551.6 619 50.7
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 1.5e-154 550.4 606 52.1
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 2.2e-153 546.6 546 56.2
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 1.2e-151 540.8 562 56.4
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 3.5e-151 539.3 506 57.7
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 3.5e-151 539.3 645 51.0
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 7.8e-151 538.1 586 52.0
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 1.7e-150 537.0 568 55.3
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 5.0e-150 535.4 568 51.4
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 5.0e-150 535.4 569 52.0
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 8.6e-150 534.6 644 50.2
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 1.1e-149 534.3 590 50.8
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 1.5e-149 533.9 622 48.6
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 4.3e-149 532.3 568 54.9
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 7.3e-149 531.6 557 53.9
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 2.1e-148 530.0 516 54.8
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 6.2e-148 528.5 556 52.5
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 1.8e-147 526.9 569 54.8
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 2.3e-147 526.6 560 51.8
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 4.4e-146 522.3 569 54.7
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 7.5e-146 521.5 580 50.3
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 3.2e-144 516.2 576 49.1
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 5.4e-144 515.4 569 51.1
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 7.0e-144 515.0 604 51.8
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 2.1e-143 513.5 450 63.3
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 2.1e-143 513.5 569 54.3
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 6.0e-143 511.9 569 51.1
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 6.6e-142 508.4 415 64.6
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 1.9e-141 506.9 626 49.8
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 6.8e-139 498.4 557 53.5
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 8.9e-139 498.0 536 53.5
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 2.6e-138 496.5 587 48.2
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 1.3e-137 494.2 505 57.0
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 4.9e-137 492.3 428 60.7
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 2.1e-135 486.9 483 57.1
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 3.5e-135 486.1 566 51.8
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 1.3e-134 484.2 541 49.9
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 5.6e-133 478.8 595 49.6
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 6.8e-131 471.9 572 47.6
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 2.8e-124 449.9 504 50.6
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 1.8e-123 447.2 450 53.1
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 9.0e-115 418.3 536 46.3
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 3.2e-96 356.7 602 37.5
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 1.5e-82 311.2 271 56.8
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 2.6e-66 257.3 408 41.4
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 2.6e-66 257.3 408 41.4
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 1.2e-50 205.3 413 34.6
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 2.0e-45 188.0 500 29.6
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 1.1e-27 129.0 189 42.3
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 1.4e-19 102.1 130 41.5
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 5.2e-14 83.6 74 51.4
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 5.2e-14 83.6 120 41.7
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 1.7e-12 78.6 89 46.1
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 1.2e-10 72.4 146 34.2
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 1.0e-09 69.3 227 29.1
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 9.6e-08 62.8 102 31.4
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 2.1e-07 61.6 98 37.8
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.1e-07 61.6 96 45.8


User provided reference genes

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