Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_14926 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.1e-42 176.0 76 100.0
COL.COLO4_25798 Corchorus olitorius HOM05D000125 ORTHO05D000120 6.2e-30 133.7 76 72.4
COL.COLO4_25765 Corchorus olitorius HOM05D000125 ORTHO05D000120 4.9e-27 124.0 76 64.5
COL.COLO4_25797 Corchorus olitorius HOM05D000125 ORTHO05D000120 3.2e-26 121.3 76 64.5
COL.COLO4_36776 Corchorus olitorius HOM05D000125 ORTHO05D000807 2.7e-25 118.2 69 71.0
COL.COLO4_27081 Corchorus olitorius HOM05D000125 ORTHO05D000120 9.5e-23 109.8 75 58.7
COL.COLO4_15064 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.1e-21 106.3 68 63.2
COL.COLO4_25766 Corchorus olitorius HOM05D000125 ORTHO05D000120 6.8e-21 103.6 63 60.3
Gorai.011G253600 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.7e-19 99.0 61 57.4
Gohir.A10G214100 Gossypium hirsutum HOM05D000125 ORTHO05D000120 2.9e-19 98.2 61 57.4
Gohir.A10G213800 Gossypium hirsutum HOM05D000125 ORTHO05D000120 4.9e-19 97.4 60 58.3
Gorai.011G253500 Gossypium raimondii HOM05D000125 ORTHO05D000120 6.4e-19 97.1 61 55.7
Gohir.D10G222900 Gossypium hirsutum HOM05D000125 ORTHO05D000120 5.4e-18 94.0 61 57.4
Gorai.011G253800 Gossypium raimondii HOM05D000125 ORTHO05D000120 5.4e-18 94.0 57 59.6
Thecc.04G182500 Theobroma cacao HOM05D000125 ORTHO05D000120 1.5e-15 85.9 63 54.0
COL.COLO4_15272 Corchorus olitorius HOM05D000125 ORTHO05D000120 5.6e-15 84.0 64 56.2
Gorai.005G017200 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.6e-14 82.4 63 54.0
Gorai.005G007000 Gossypium raimondii HOM05D000125 ORTHO05D000120 2.1e-14 82.0 63 54.0
COL.COLO4_09861 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.8e-14 81.6 68 48.5
COL.COLO4_29325 Corchorus olitorius HOM05D000125 ORTHO05D000120 3.6e-14 81.3 65 50.8
Thecc.10G050200 Theobroma cacao HOM05D000125 ORTHO05D000120 3.6e-14 81.3 67 52.2
Gohir.A10G214000 Gossypium hirsutum HOM05D000125 ORTHO05D000120 4.7e-14 80.9 62 51.6
Gorai.005G006900 Gossypium raimondii HOM05D000125 ORTHO05D000120 4.7e-14 80.9 63 52.4
Gorai.005G017300 Gossypium raimondii HOM05D000125 ORTHO05D000120 4.7e-14 80.9 67 49.3
Duzib151G0726 Durio zibethinus HOM05D000125 ORTHO05D000120 6.2e-14 80.5 63 49.2
Thecc.10G010300 Theobroma cacao HOM05D000125 ORTHO05D000120 8.1e-14 80.1 62 51.6
COL.COLO4_29323 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.1e-13 79.7 62 50.0
Gorai.005G018800 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.4e-13 79.3 67 44.8
Duzib151G0944 Durio zibethinus HOM05D000125 ORTHO05D000120 1.8e-13 79.0 63 47.6
Gohir.A02G013001 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.8e-13 79.0 67 49.3
Gohir.A02G014001 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.8e-13 79.0 67 46.3
Gohir.A10G209500 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.8e-13 79.0 65 47.7
Gohir.A13G008000 Gossypium hirsutum HOM05D000125 ORTHO05D000120 2.4e-13 78.6 62 53.2
Gohir.D02G015700 Gossypium hirsutum HOM05D000125 ORTHO05D000120 2.4e-13 78.6 67 46.3
Gohir.D07G088500 Gossypium hirsutum HOM05D000125 ORTHO05D000120 4.0e-13 77.8 63 46.0
Gorai.001G094700 Gossypium raimondii HOM05D000125 ORTHO05D000120 4.0e-13 77.8 63 46.0
Gorai.005G019000 Gossypium raimondii HOM05D000125 ORTHO05D000120 4.0e-13 77.8 63 52.4
Gorai.005G007100 Gossypium raimondii HOM05D000125 ORTHO05D000120 5.2e-13 77.4 63 50.8
Duzib106G1937 Durio zibethinus HOM05D000125 ORTHO05D000120 6.8e-13 77.0 67 44.8
Gohir.D06G173300 Gossypium hirsutum HOM05D000125 ORTHO05D000120 6.8e-13 77.0 61 50.8
Gorai.005G023300 Gossypium raimondii HOM05D000125 ORTHO05D000120 6.8e-13 77.0 62 50.0
Gorai.011G255500 Gossypium raimondii HOM05D000125 ORTHO05D000120 6.8e-13 77.0 58 51.7
Gorai.N028000 Gossypium raimondii HOM05D000125 ORTHO05D000120 6.8e-13 77.0 58 51.7
Gohir.A02G013000 Gossypium hirsutum HOM05D000125 ORTHO05D000120 8.9e-13 76.6 68 50.0
Gohir.D02G013600 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.5e-12 75.9 61 50.8
Gohir.A02G006400 Gossypium hirsutum HOM05D000125 ORTHO05D000120 2.0e-12 75.5 63 50.8
Gohir.D10G224600 Gossypium hirsutum HOM05D000125 ORTHO05D000120 2.0e-12 75.5 57 50.9
Thecc.10G010400 Theobroma cacao HOM05D000125 ORTHO05D000120 2.6e-12 75.1 64 46.9
Gohir.D02G015100 Gossypium hirsutum HOM05D000125 ORTHO05D000120 3.4e-12 74.7 63 49.2
Gohir.D13G008200 Gossypium hirsutum HOM05D000125 ORTHO05D000120 3.4e-12 74.7 62 50.0
Gorai.005G018400 Gossypium raimondii HOM05D000125 ORTHO05D000120 3.4e-12 74.7 63 49.2
Gohir.D02G015000 Gossypium hirsutum HOM05D000125 ORTHO05D000120 4.4e-12 74.3 67 43.3
Thecc.05G289300 Theobroma cacao HOM05D000125 ORTHO05D000120 4.4e-12 74.3 62 46.8
Gorai.005G018900 Gossypium raimondii HOM05D000125 ORTHO05D000120 5.8e-12 73.9 63 50.8
Thecc.04G182800 Theobroma cacao HOM05D000125 ORTHO05D000120 5.8e-12 73.9 58 51.7
Gohir.A02G013900 Gossypium hirsutum HOM05D000125 ORTHO05D000120 7.6e-12 73.6 67 43.3
Cpa.g.sc12.39 Carica papaya HOM05D000125 ORTHO05D000120 9.9e-12 73.2 68 42.6
Gohir.D13G007300 Gossypium hirsutum HOM05D000125 ORTHO05D000120 9.9e-12 73.2 62 46.8
Cpa.g.sc12.41 Carica papaya HOM05D000125 ORTHO05D000120 1.3e-11 72.8 67 43.3
COL.COLO4_05669 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.3e-11 72.8 62 48.4
Gohir.A02G006600 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.3e-11 72.8 61 49.2
Cpa.g.sc12.42 Carica papaya HOM05D000125 ORTHO05D000120 1.7e-11 72.4 62 46.8
Gohir.D02G015800 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.7e-11 72.4 62 50.0
Gorai.005G018200 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.7e-11 72.4 63 44.4
COL.COLO4_16602 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.9e-11 71.6 64 46.9
Gohir.D02G006250 Gossypium hirsutum HOM05D000125 ORTHO05D000120 2.9e-11 71.6 63 47.6
Duzib251G0454 Durio zibethinus HOM05D000125 ORTHO05D000120 3.8e-11 71.2 62 50.0
Gorai.013G009200 Gossypium raimondii HOM05D000125 ORTHO05D000120 3.8e-11 71.2 62 46.8
Thecc.10G051000 Theobroma cacao HOM05D000125 ORTHO05D000120 3.8e-11 71.2 65 49.2
Cpa.g.sc12.43 Carica papaya HOM05D000125 ORTHO05D000120 4.9e-11 70.9 63 42.9
Gohir.D13G007433 Gossypium hirsutum HOM05D000125 ORTHO05D000120 4.9e-11 70.9 62 45.2
Gorai.011G244400 Gossypium raimondii HOM05D000125 ORTHO05D000120 4.9e-11 70.9 62 45.2
Gohir.A02G006200 Gossypium hirsutum HOM05D000125 ORTHO05D000120 6.4e-11 70.5 65 47.7
Gohir.A02G013101 Gossypium hirsutum HOM05D000125 ORTHO05D000120 6.4e-11 70.5 63 47.6
Gohir.A13G005900 Gossypium hirsutum HOM05D000125 ORTHO05D000120 6.4e-11 70.5 62 45.2
Gohir.D02G018800 Gossypium hirsutum HOM05D000125 ORTHO05D000120 6.4e-11 70.5 63 49.2
Gohir.D13G008400 Gossypium hirsutum HOM05D000125 ORTHO05D000120 6.4e-11 70.5 62 46.8
Gorai.005G023200 Gossypium raimondii HOM05D000125 ORTHO05D000120 6.4e-11 70.5 63 49.2
Gorai.009G309600 Gossypium raimondii HOM05D000125 ORTHO05D000120 6.4e-11 70.5 69 43.5
Gorai.013G008600 Gossypium raimondii HOM05D000125 ORTHO05D000120 6.4e-11 70.5 62 48.4
Thecc.04G183300 Theobroma cacao HOM05D000125 ORTHO05D000120 6.4e-11 70.5 57 50.9
COL.COLO4_32877 Corchorus olitorius HOM05D000125 ORTHO05D000120 8.4e-11 70.1 64 46.9
Duzib212G0749 Durio zibethinus HOM05D000125 ORTHO05D000120 8.4e-11 70.1 65 44.6
Gohir.D02G015366 Gossypium hirsutum HOM05D000125 ORTHO05D000120 8.4e-11 70.1 63 41.3
COL.COLO4_00076 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.1e-10 69.7 65 44.6
COL.COLO4_38431 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.1e-10 69.7 45 57.8
Gorai.013G008800 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.1e-10 69.7 62 46.8
Gohir.D05G293200 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.4e-10 69.3 69 43.5
Gohir.D13G008500 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.9e-10 68.9 62 46.8
Gorai.013G007800 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.9e-10 68.9 62 45.2
Gohir.A02G014100 Gossypium hirsutum HOM05D000125 ORTHO05D000120 3.2e-10 68.2 68 39.7
Duzib106G0379 Durio zibethinus HOM05D000125 ORTHO05D000120 4.1e-10 67.8 68 47.1
Duzib106G1761 Durio zibethinus HOM05D000125 ORTHO05D000120 4.1e-10 67.8 63 41.3
Duzib106G1982 Durio zibethinus HOM05D000125 ORTHO05D000120 4.1e-10 67.8 63 47.6
Gohir.D10G220550 Gossypium hirsutum HOM05D000125 ORTHO05D000120 4.1e-10 67.8 69 43.5
Gorai.011G248800 Gossypium raimondii HOM05D000125 ORTHO05D000120 4.1e-10 67.8 69 43.5
Gorai.013G007600 Gossypium raimondii HOM05D000125 ORTHO05D000120 4.1e-10 67.8 62 45.2
Gohir.D10G217900 Gossypium hirsutum HOM05D000125 ORTHO05D000120 5.4e-10 67.4 62 43.5
Gohir.A13G007300 Gossypium hirsutum HOM05D000125 ORTHO05D000120 7.1e-10 67.0 62 43.5
Gorai.013G007400 Gossypium raimondii HOM05D000125 ORTHO05D000120 7.1e-10 67.0 64 43.8
Thecc.10G051300 Theobroma cacao HOM05D000125 ORTHO05D000120 7.1e-10 67.0 60 50.0
Gohir.A02G016902 Gossypium hirsutum HOM05D000125 ORTHO05D000120 9.2e-10 66.6 52 51.9
Gorai.011G243700 Gossypium raimondii HOM05D000125 ORTHO05D000120 9.2e-10 66.6 62 41.9
Thecc.10G051500 Theobroma cacao HOM05D000125 ORTHO05D000120 9.2e-10 66.6 63 47.6
COL.COLO4_24367 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.2e-09 66.2 61 45.9
Duzib106G1302 Durio zibethinus HOM05D000125 ORTHO05D000120 1.6e-09 65.9 63 42.9
COL.COLO4_14900 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.1e-09 65.5 65 41.5
COL.COLO4_13099 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.7e-09 65.1 72 41.7
Potri.016G057800 Populus trichocarpa HOM05D000125 ORTHO05D000120 2.7e-09 65.1 60 45.0
Gohir.D10G217300 Gossypium hirsutum HOM05D000125 ORTHO05D000120 6.0e-09 63.9 75 38.7
Gohir.D13G007466 Gossypium hirsutum HOM05D000125 ORTHO05D000120 7.8e-09 63.5 64 42.2
Gorai.011G244000 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.0e-08 63.2 59 40.7
COL.COLO4_28744 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.3e-08 62.8 62 40.3
COL.COLO4_08697 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.7e-08 62.4 67 41.8
Duzib106G1018 Durio zibethinus HOM05D000125 ORTHO05D000120 1.7e-08 62.4 63 46.0
Potri.016G047000 Populus trichocarpa HOM05D000125 ORTHO05D000120 1.7e-08 62.4 59 44.1
COL.COLO4_29327 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.3e-08 62.0 64 43.8
Gohir.A10G215612 Gossypium hirsutum HOM05D000125 ORTHO05D000120 2.3e-08 62.0 57 45.6
COL.COLO4_24390 Corchorus olitorius HOM05D000125 ORTHO05D000120 3.0e-08 61.6 69 37.7
Gorai.005G023400 Gossypium raimondii HOM05D000125 ORTHO05D000120 3.0e-08 61.6 56 44.6
Gorai.011G242900 Gossypium raimondii HOM05D000125 ORTHO05D000120 6.6e-08 60.5 62 43.5
Thecc.05G165600 Theobroma cacao HOM05D000125 ORTHO05D000120 6.6e-08 60.5 62 38.7
Thecc.10G051600 Theobroma cacao HOM05D000125 ORTHO05D000807 8.7e-08 60.1 60 51.7
Gohir.D09G227000 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.1e-07 59.7 62 43.5
Gorai.006G248900 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.1e-07 59.7 62 43.5
Cpa.g.sc283.1 Carica papaya HOM05D000125 ORTHO05D000120 1.9e-07 58.9 67 41.8
Gorai.005G037500 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.9e-07 58.9 65 36.9
Gohir.D02G033350 Gossypium hirsutum HOM05D000125 ORTHO05D000120 3.3e-07 58.2 62 37.1
COL.COLO4_06702 Corchorus olitorius HOM05D000125 ORTHO05D000120 4.3e-07 57.8 59 42.4
Gorai.N008300 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.2e-06 56.2 64 39.1
Thecc.05G184800 Theobroma cacao HOM05D000125 ORTHO05D000120 1.6e-06 55.8 62 37.1
Gorai.005G036600 Gossypium raimondii HOM05D000125 ORTHO05D000120 2.1e-06 55.5 62 35.5
COL.COLO4_36154 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.8e-06 55.1 63 39.7
Gorai.005G019200 Gossypium raimondii HOM05D000125 ORTHO05D000120 2.8e-06 55.1 51 43.1
COL.COLO4_19825 Corchorus olitorius HOM05D000125 ORTHO05D000120 3.6e-06 54.7 71 32.4
Gorai.005G038100 Gossypium raimondii HOM05D000125 ORTHO05D000120 3.6e-06 54.7 65 32.3
Thecc.05G183900 Theobroma cacao HOM05D000125 ORTHO05D000120 3.6e-06 54.7 69 36.2
COL.COLO4_24368 Corchorus olitorius HOM05D000125 ORTHO05D000120 4.7e-06 54.3 74 33.8
Duzib114G1013 Durio zibethinus HOM05D000125 ORTHO05D000120 4.7e-06 54.3 66 34.8
QL09p047056 Quercus lobata HOM05D000125 ORTHO05D000120 4.7e-06 54.3 63 34.9
Gorai.005G038600 Gossypium raimondii HOM05D000125 ORTHO05D000120 6.2e-06 53.9 65 33.8
Gorai.005G037300 Gossypium raimondii HOM05D000125 ORTHO05D000120 8.1e-06 53.5 62 33.9


User provided reference genes

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