Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07981 Corchorus olitorius HOM05D003876 ORTHO05D004560 0.0e+00 1194.1 627 100.0
Thecc.07G169600 Theobroma cacao HOM05D003876 ORTHO05D004560 8.3e-290 1000.0 625 85.1
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 3.6e-285 984.6 625 84.0
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 4.1e-281 971.1 623 82.8
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 3.0e-279 964.9 623 82.5
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 1.7e-213 746.5 612 66.0
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 1.1e-212 743.8 627 64.4
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 7.2e-209 731.1 630 63.3
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 3.9e-207 725.3 625 63.8
Ciclev10007236m.g Citrus clementina HOM05D003876 ORTHO05D004560 2.2e-205 719.5 628 62.9
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 2.2e-205 719.5 627 62.8
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 7.7e-203 711.1 626 62.3
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 2.5e-201 706.1 627 62.5
CiPaw.11G188300 Carya illinoinensis HOM05D003876 ORTHO05D004560 1.2e-198 697.2 626 61.0
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 3.4e-198 695.7 626 61.8
Lj4C311T3 Lonicera japonica HOM05D003876 ORTHO05D004560 1.3e-197 693.7 622 61.6
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 2.7e-195 686.0 617 60.6
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 3.5e-195 685.6 617 61.9
TWI38G0366 Tripterygium wilfordii HOM05D003876 ORTHO05D004560 5.9e-195 684.9 632 60.1
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 6.5e-194 681.4 629 60.7
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 8.8e-191 671.0 612 62.3
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 1.2e-190 670.6 629 59.6
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 1.7e-189 666.8 618 58.9
vmacro22462 Vaccinium macrocarpon HOM05D003876 ORTHO05D004560 1.4e-188 663.7 616 60.4
CSS0021387 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 1.6e-184 650.2 595 61.0
Rhsim03G0118500 Rhododendron simsii HOM05D003876 ORTHO05D004560 3.0e-183 646.0 627 58.1
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 3.7e-181 639.0 597 59.0
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 1.6e-179 633.6 623 57.8
Nn1g07120 Nelumbo nucifera HOM05D003876 ORTHO05D004560 4.6e-179 632.1 630 56.7
ClCG09G008390 Citrullus lanatus HOM05D003876 ORTHO05D004560 1.7e-178 630.2 598 58.9
THA.LOC104817664 Tarenaya hassleriana HOM05D003876 ORTHO05D004560 7.3e-177 624.8 628 56.4
Sc07g0002730 Simmondsia chinensis HOM05D003876 ORTHO05D004560 2.8e-176 622.9 629 54.1
CsaV3_7G026680 Cucumis sativus L. HOM05D003876 ORTHO05D004560 3.6e-176 622.5 598 58.2
DCAR_015293 Daucus carota HOM05D003876 ORTHO05D004560 1.8e-175 620.2 611 57.1
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 8.9e-175 617.8 627 56.8
Aa31LG5G10400 Aethionema arabicum HOM05D003876 ORTHO05D004560 2.6e-174 616.3 610 56.4
TPR.G34799 Trifolium pratense HOM05D003876 ORTHO05D004560 3.4e-174 615.9 602 58.5
AUR62020460 Chenopodium quinoa HOM05D003876 ORTHO05D004560 1.7e-173 613.6 626 56.2
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 3.7e-173 612.5 598 57.7
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 6.4e-173 611.7 624 54.8
AUR62015755 Chenopodium quinoa HOM05D003876 ORTHO05D004560 8.3e-173 611.3 627 55.8
MELO3C021122.2 Cucumis melo HOM05D003876 ORTHO05D004560 4.1e-172 609.0 598 57.4
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 4.6e-171 605.5 606 57.6
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 1.3e-170 604.0 625 57.0
Psat7g030440 Pisum sativum HOM05D003876 ORTHO05D004560 1.7e-170 603.6 600 57.3
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 3.0e-170 602.8 614 55.7
HanXRQChr14g0456751 Helianthus annuus HOM05D003876 ORTHO05D004560 5.2e-167 592.0 606 56.6
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 5.8e-166 588.6 604 55.3
AL7G25820 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 9.8e-166 587.8 624 53.5
CAN.G93.17 Capsicum annuum HOM05D003876 ORTHO05D004560 9.8e-166 587.8 606 54.1
Peaxi162Scf01227g00036 Petunia axillaris HOM05D003876 ORTHO05D004560 2.2e-165 586.6 619 54.1
Sopen02g015700 Solanum pennellii HOM05D003876 ORTHO05D004560 2.2e-165 586.6 616 53.7
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.1e-164 584.3 625 55.8
Cc02_g11170 Coffea canephora HOM05D003876 ORTHO05D004560 1.9e-164 583.6 621 53.6
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 1.9e-164 583.6 623 54.7
SalBow4G0132 Salvia bowleyana HOM05D003876 ORTHO05D004560 3.2e-164 582.8 617 54.6
SalBow4G0850 Salvia bowleyana HOM05D003876 ORTHO05D004560 5.4e-164 582.0 617 54.6
Medtr3g051730 Medicago truncatula HOM05D003876 ORTHO05D004560 7.1e-164 581.6 601 54.9
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 9.2e-164 581.3 623 55.4
Ah.14g087580 Amaranthus hybridus HOM05D003876 ORTHO05D004560 1.2e-163 580.9 614 53.7
MSTRG.9162 Avicennia marina HOM05D003876 ORTHO05D004560 2.1e-163 580.1 613 55.1
AT4G27010 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 2.7e-163 579.7 616 53.7
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 6.0e-163 578.6 623 55.4
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.3e-162 577.4 623 55.2
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 8.6e-162 574.7 601 53.7
Lj6g0024588 Lotus japonicus HOM05D003876 ORTHO05D004560 1.9e-161 573.5 595 55.0
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 3.1e-159 566.2 604 54.3
VMungo0540G1458 Vigna mungo HOM05D003876 ORTHO05D004560 3.1e-159 566.2 604 53.3
MBI16_g24182_MAGBIO Magnolia biondii HOM05D003876 ORTHO05D004560 6.8e-159 565.1 671 50.5
ECA238G2706 Erigeron canadensis HOM05D003876 ORTHO05D004560 2.0e-158 563.5 574 55.7
Glyma.18G096800 Glycine max HOM05D003876 ORTHO05D004560 2.0e-158 563.5 602 53.8
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 5.8e-158 562.0 598 54.5
SGA_v2.0_scaffold13G06370 Striga asiatica HOM05D003876 ORTHO05D004560 5.8e-158 562.0 620 53.1
PSO541G2928 Papaver somniferum HOM05D003876 ORTHO05D004560 2.7e-155 553.1 640 49.8
Aqoxy1G03250 Aquilegia oxysepala HOM05D003876 ORTHO05D004560 3.5e-155 552.7 632 51.7
Sp7g24970 Schrenkiella parvula HOM05D003876 ORTHO05D004560 1.0e-154 551.2 669 49.5
PSO675G8409 Papaver somniferum HOM05D003876 ORTHO05D004560 2.3e-154 550.1 643 49.8
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 1.1e-151 541.2 631 50.6
Migut.F01968 Erythranthe guttata HOM05D003876 ORTHO05D004560 7.8e-147 525.0 601 50.7
Migut.D01652 Erythranthe guttata HOM05D003876 ORTHO05D004560 1.9e-145 520.4 601 50.2
SHI26626 Sapria himalayana HOM05D003876 ORTHO05D004560 4.8e-136 489.2 603 49.1
BolC1t02247H Brassica oleracea HOM05D003876 ORTHO05D004560 6.2e-136 488.8 632 48.3
C01p23130 Brassica napus HOM05D003876 ORTHO05D004560 7.6e-134 481.9 639 47.9
BcaNung03576 Brassica carinata HOM05D003876 ORTHO05D004560 5.5e-132 475.7 641 47.3
ATR0752G176 Amborella trichopoda HOM05D003876 ORTHO05D004560 1.8e-130 470.7 666 42.9
Zm00001eb070180 Zea mays HOM05D003876 ORTHO05D004560 3.9e-130 469.5 650 45.1
AL2G26020 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 5.1e-130 469.2 570 48.4
A01p18170 Brassica napus HOM05D003876 ORTHO05D004560 5.1e-130 469.2 639 47.1
BraA01t01772Z Brassica rapa HOM05D003876 ORTHO05D004560 5.1e-130 469.2 639 47.1
AT1G72270 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 5.6e-129 465.7 598 47.3
CDE12G0710 Ceratophyllum demersum HOM05D003876 ORTHO05D004560 6.9e-127 458.8 583 47.2
AL1G51930 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 7.9e-123 445.3 623 44.3
Thhalv10009735m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 2.2e-109 400.6 605 45.3
HPP92_009565 Vanilla planifolia HOM05D003876 ORTHO05D004560 7.2e-108 395.6 603 41.3
Lj4A310T24 Lonicera japonica HOM05D003876 ORTHO05D004560 9.4e-108 395.2 622 42.9
Thhalv10024185m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 1.7e-104 384.4 459 48.8
SEGI_05754 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 4.8e-104 382.9 708 37.4
Haze_08116 Corylus avellana HOM05D003876 ORTHO05D004560 1.0e-98 365.2 334 62.3
BcaNung03573 Brassica carinata HOM05D003876 ORTHO05D004560 1.0e-90 338.6 335 57.6
CARHR229820 Cardamine hirsuta HOM05D003876 ORTHO05D004560 6.3e-88 329.3 432 48.4
Nitab4.5_0014432g0010 Nicotiana tabacum HOM05D003876 ORTHO05D004560 1.1e-84 318.5 349 51.0
AL1G52050 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 1.6e-83 314.7 626 35.6
Ciclev10007833m.g Citrus clementina HOM05D003876 ORTHO05D004560 1.5e-81 308.1 395 45.8
Gohir.A05G328616 Gossypium hirsutum HOM05D003876 ORTHO05D004560 2.4e-79 300.8 219 74.0
Nitab4.5_0000071g0230 Nicotiana tabacum HOM05D003876 ORTHO05D004560 1.5e-76 291.6 330 50.9
SMO146G0332 Selaginella moellendorffii HOM05D003876 ORTHO05D004560 1.2e-75 288.5 594 34.7
Pp3c2_30140 Physcomitrium patens HOM05D003876 ORTHO05D004560 6.8e-74 282.7 643 33.6
Mapoly0015s0081 Marchantia polymorpha HOM05D003876 ORTHO05D004560 1.4e-71 275.0 660 32.7
Ca_01853_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 7.3e-60 236.1 189 67.7
AagrBONN_evm.TU.Sc2ySwM_362.592 Anthoceros agrestis HOM05D003876 ORTHO05D004560 2.3e-58 231.1 487 33.9
CBR_g48672 Chara braunii HOM05D003876 ORTHO05D004560 1.7e-37 161.8 695 24.2
Carub.0007s1383 Capsella rubella HOM05D003876 ORTHO05D004560 5.6e-36 156.8 238 42.4
Os04g0625350 Oryza sativa ssp. japonica HOM05D003876 ORTHO05D004560 2.4e-31 141.4 195 44.1
QL08p011039 Quercus lobata HOM05D003876 ORTHO05D004560 1.3e-27 129.0 127 57.5
Carub.0004s0902 Capsella rubella HOM05D003876 ORTHO05D004560 6.9e-26 123.2 240 38.3
HPP92_009518 Vanilla planifolia HOM05D003876 ORTHO05D004560 6.9e-18 96.7 137 40.9
QL08p010640 Quercus lobata HOM05D003876 ORTHO05D004560 5.1e-13 80.5 89 51.7
Cre02.g074300 Chlamydomonas reinhardtii HOM05D003876 ORTHO05D004560 1.3e-11 75.9 465 23.0
QL10p036392 Quercus lobata HOM05D003876 ORTHO05D004560 1.6e-11 75.5 75 53.3
QL08p010686 Quercus lobata HOM05D003876 ORTHO05D004560 8.1e-11 73.2 56 67.9
SEGI_19037 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 2.1e-06 58.5 169 32.0


User provided reference genes

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