Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 0.0e+00 1230.3 656 100.0
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 1.2e-270 936.4 630 77.1
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 2.1e-267 925.6 630 79.2
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 2.2e-245 852.4 642 74.8
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 1.2e-241 840.1 627 72.9
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 1.4e-231 806.6 627 69.9
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 3.6e-227 792.0 628 67.7
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 3.6e-219 765.4 634 67.5
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 9.2e-215 750.7 636 65.4
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 1.2e-214 750.4 653 62.8
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 1.6e-214 750.0 636 66.0
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 3.5e-214 748.8 639 65.1
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 3.1e-210 735.7 629 62.3
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 6.8e-210 734.6 634 64.2
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 1.3e-208 730.3 662 62.5
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 3.7e-208 728.8 662 59.8
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 8.3e-208 727.6 613 62.6
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 4.1e-207 725.3 635 62.7
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 1.6e-206 723.4 617 65.0
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 3.5e-206 722.2 662 62.5
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 3.5e-206 722.2 591 64.0
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 3.3e-204 715.7 592 64.2
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 4.3e-204 715.3 642 62.6
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 4.3e-204 715.3 645 62.9
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 4.3e-204 715.3 635 60.9
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 3.6e-203 712.2 600 63.8
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 3.6e-203 712.2 584 64.4
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 1.4e-202 710.3 588 65.0
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 1.8e-202 709.9 653 59.0
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 5.2e-202 708.4 654 59.2
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 8.9e-202 707.6 657 60.6
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 1.2e-201 707.2 631 61.8
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 2.6e-201 706.1 615 63.9
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 7.5e-201 704.5 645 62.0
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 2.2e-200 703.0 653 60.6
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 6.4e-200 701.4 660 58.0
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 1.4e-199 700.3 584 64.4
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 1.9e-199 699.9 637 62.5
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 4.1e-199 698.7 616 63.5
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 1.6e-198 696.8 615 63.7
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 1.6e-198 696.8 644 58.7
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 2.1e-198 696.4 623 60.7
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 3.5e-198 695.7 628 59.4
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 4.6e-198 695.3 586 64.0
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 1.0e-197 694.1 640 59.2
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 3.9e-197 692.2 582 64.3
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 8.6e-197 691.0 657 61.0
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 2.5e-196 689.5 628 61.9
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 3.3e-196 689.1 628 63.4
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 5.2e-194 681.8 586 64.5
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 7.6e-193 677.9 587 63.5
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 9.9e-193 677.6 656 60.2
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 1.7e-192 676.8 652 59.2
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 6.4e-192 674.9 582 64.8
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 8.4e-192 674.5 657 59.8
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 3.2e-191 672.5 629 56.8
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 4.2e-191 672.2 642 56.2
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 4.2e-191 672.2 646 58.8
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 7.1e-191 671.4 617 62.1
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 1.2e-190 670.6 583 59.5
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 6.0e-190 668.3 645 60.6
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 1.0e-189 667.5 565 65.0
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 1.1e-188 664.1 621 57.6
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 1.5e-188 663.7 645 60.3
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 1.4e-183 647.1 584 58.2
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 1.3e-181 640.6 631 59.6
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 9.6e-180 634.4 593 57.8
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 1.6e-179 633.6 562 61.7
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 3.6e-179 632.5 594 57.4
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 1.8e-178 630.2 601 60.7
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 4.0e-178 629.0 606 57.8
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 6.9e-178 628.2 583 61.4
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 5.8e-177 625.2 640 55.3
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 2.9e-176 622.9 533 62.5
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 3.8e-176 622.5 593 58.0
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 5.4e-175 618.6 585 56.9
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 1.2e-174 617.5 637 57.3
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 2.7e-174 616.3 581 56.5
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 3.5e-174 615.9 637 55.3
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 6.7e-173 611.7 628 56.5
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 1.1e-172 610.9 590 57.1
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 5.6e-172 608.6 614 57.3
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 1.3e-171 607.4 598 54.8
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 6.2e-171 605.1 555 61.8
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 1.1e-170 604.4 470 65.5
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 1.2e-169 600.9 585 60.7
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 2.0e-169 600.1 654 54.6
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 2.9e-168 596.3 582 58.1
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 2.8e-163 579.7 440 66.6
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 6.2e-163 578.6 580 54.3
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 3.1e-162 576.2 546 60.6
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 2.0e-161 573.5 596 53.2
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 3.8e-160 569.3 456 65.1
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 3.4e-153 546.2 581 54.4
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 2.2e-147 526.9 554 53.4
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 4.8e-139 499.2 573 51.8
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 1.8e-138 497.3 563 52.6
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 4.2e-111 406.4 610 41.3
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 1.8e-106 391.0 290 65.5
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 2.3e-80 304.3 585 39.1
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 2.3e-80 304.3 585 39.1
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 3.6e-62 243.8 459 36.4
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 1.3e-48 198.7 433 31.4
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 3.8e-35 154.1 136 55.1
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 2.4e-29 134.8 190 42.6
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 1.7e-19 102.1 166 37.3
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 5.5e-18 97.1 110 50.0
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.6e-15 88.2 120 42.5
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 3.3e-15 87.8 211 30.3
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 4.2e-10 70.9 122 30.3
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 1.6e-09 68.9 61 45.9
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 6.1e-09 67.0 96 43.8
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 8.0e-09 66.6 113 35.4
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.5e-07 62.4 63 36.5
Cre10.g459350 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 4.4e-07 60.8 204 27.5


User provided reference genes

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