Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_04711 Corchorus olitorius HOM05D002974 ORTHO05D002992 2.8e-68 261.9 142 100.0
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 7.2e-24 114.4 155 58.7
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 5.7e-21 104.8 156 46.8
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.6e-18 96.7 138 45.7
Potri.006G038900 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.3e-17 92.8 149 46.3
Thecc.05G134100 Theobroma cacao HOM05D002974 ORTHO05D002992 2.3e-17 92.8 141 55.3
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 2.5e-16 89.4 148 42.6
Potri.016G036600 Populus trichocarpa HOM05D002974 ORTHO05D002992 7.2e-16 87.8 142 43.0
Sabra16G0038800 Salix brachista HOM05D002974 ORTHO05D002992 1.2e-15 87.0 121 47.1
Phvul.001G123400 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 6.1e-15 84.7 141 40.4
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 8.0e-15 84.3 121 47.9
CiPaw.10G040200 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.0e-14 84.0 152 44.1
Manes.09G004900 Manihot esculenta HOM05D002974 ORTHO05D002992 1.8e-14 83.2 125 48.8
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 1.8e-14 83.2 143 39.2
QL07p010402 Quercus lobata HOM05D002974 ORTHO05D002992 2.3e-14 82.8 127 44.1
Gohir.A11G307100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 3.0e-14 82.4 145 42.8
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 3.0e-14 82.4 134 41.0
Lalb_Chr22g0357431 Lupinus albus HOM05D002974 ORTHO05D002992 8.9e-14 80.9 159 39.6
Sabra06G0026200 Salix brachista HOM05D002974 ORTHO05D002992 1.2e-13 80.5 122 46.7
Gohir.D11G322600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.5e-13 80.1 129 42.6
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 2.0e-13 79.7 154 37.0
Gorai.007G352700 Gossypium raimondii HOM05D002974 ORTHO05D002992 2.6e-13 79.3 129 42.6
Lalb_Chr24g0400351 Lupinus albus HOM05D002974 ORTHO05D002992 4.4e-13 78.6 156 37.8
PGR031G3974 Punica granatum HOM05D002974 ORTHO05D002992 5.7e-13 78.2 156 40.4
CiPaw.09G047800 Carya illinoinensis HOM05D002974 ORTHO05D002992 7.5e-13 77.8 148 41.2
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 2.2e-12 76.3 126 42.1
Psat3g078800 Pisum sativum HOM05D002974 ORTHO05D002992 2.2e-12 76.3 136 41.9
TPR.G8953 Trifolium pratense HOM05D002974 ORTHO05D002992 2.2e-12 76.3 139 39.6
arahy.Tifrunner.gnm1.ann1.C03B5F Arachis hypogaea HOM05D002974 ORTHO05D002992 2.8e-12 75.9 146 37.7
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 4.9e-12 75.1 138 39.9
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 6.3e-12 74.7 145 36.6
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 6.3e-12 74.7 144 41.0
Medtr7g089860 Medicago truncatula HOM05D002974 ORTHO05D002992 6.3e-12 74.7 118 44.1
Cpa.g.sc5.168 Carica papaya HOM05D002974 ORTHO05D002992 8.3e-12 74.3 166 38.0
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 8.3e-12 74.3 73 57.5
Lj1g0016303 Lotus japonicus HOM05D002974 ORTHO05D002992 2.4e-11 72.8 143 37.1
Glyma.19G130400 Glycine max HOM05D002974 ORTHO05D002992 7.0e-11 71.2 150 36.0
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 5.9e-10 68.2 115 39.1
Eucgr.A02242 Eucalyptus grandis HOM05D002974 ORTHO05D002992 5.9e-10 68.2 143 39.9
CSS0032574 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 1.0e-09 67.4 126 39.7
Dinv06180 Davidia involucrata HOM05D002974 ORTHO05D002992 1.0e-09 67.4 107 43.0
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 2.3e-09 66.2 129 39.5
MD14G1088500 Malus domestica HOM05D002974 ORTHO05D002992 6.6e-09 64.7 77 48.1
Ca_08391_v3 Cicer arietinum L. HOM05D002974 ORTHO05D002992 1.1e-08 63.9 102 41.2
C04p02500 Brassica napus HOM05D002974 ORTHO05D002992 3.3e-08 62.4 110 39.1
Atru.chr1.1439 Acer truncatum HOM05D002974 ORTHO05D002992 4.3e-08 62.0 50 66.0
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 7.3e-08 61.2 114 42.1
MELO3C009755.2 Cucumis melo HOM05D002974 ORTHO05D002992 9.5e-08 60.8 44 68.2
MELO3C019076.2 Cucumis melo HOM05D002974 ORTHO05D002992 9.5e-08 60.8 144 31.2
ClCG10G016220 Citrullus lanatus HOM05D002974 ORTHO05D002992 1.2e-07 60.5 43 69.8
Oeu059346.1 Olea europaea HOM05D002974 ORTHO05D002992 1.2e-07 60.5 77 46.8
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 1.2e-07 60.5 149 32.2
Lalb_Chr06g0173671 Lupinus albus HOM05D002974 ORTHO05D002992 1.6e-07 60.1 66 47.0
Sed0014788 Sechium edule HOM05D002974 ORTHO05D002992 1.6e-07 60.1 121 35.5
SHI49841 Sapria himalayana HOM05D048774 ORTHO05D002992 2.1e-07 59.7 115 40.9
SHI50452 Sapria himalayana HOM05D048774 ORTHO05D002992 2.1e-07 59.7 115 40.9
THA.LOC104824399 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 2.8e-07 59.3 135 36.3
CsaV3_4G029660 Cucumis sativus L. HOM05D002974 ORTHO05D002992 4.7e-07 58.5 145 31.7
Nitab4.5_0000812g0090 Nicotiana tabacum HOM05D015198 ORTHO05D002992 4.7e-07 58.5 137 37.2
ClCG04G004500 Citrullus lanatus HOM05D002974 ORTHO05D002992 8.0e-07 57.8 67 49.3
AL4G39150 Arabidopsis lyrata HOM05D002974 ORTHO05D002992 1.0e-06 57.4 111 40.5
Thhalv10006291m.g Eutrema salsugineum HOM05D002974 ORTHO05D002992 1.0e-06 57.4 114 40.4
FAN09G2803 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.4e-06 57.0 70 50.0
Lsat_1_v5_gn_5_156980 Lactuca sativa HOM05D002974 ORTHO05D002992 1.4e-06 57.0 111 36.9
CARHR136270 Cardamine hirsuta HOM05D002974 ORTHO05D002992 1.8e-06 56.6 46 63.0
Eucgr.G03218 Eucalyptus grandis HOM05D002974 ORTHO05D002992 1.8e-06 56.6 104 37.5
FAN02G0528 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.8e-06 56.6 70 50.0
Rhsim04G0111200 Rhododendron simsii HOM05D002974 ORTHO05D002992 1.8e-06 56.6 104 36.5
Rhsim04G0112500 Rhododendron simsii HOM05D002974 ORTHO05D002992 1.8e-06 56.6 104 36.5
AT2G41180 Arabidopsis thaliana HOM05D002974 ORTHO05D002992 2.3e-06 56.2 107 39.3
BolC4t21893H Brassica oleracea HOM05D002974 ORTHO05D002992 2.3e-06 56.2 111 37.8
BraA05t19205Z Brassica rapa HOM05D002974 ORTHO05D002992 2.3e-06 56.2 111 37.8
FvH4_6g25410 Fragaria vesca HOM05D002974 ORTHO05D002992 2.3e-06 56.2 70 50.0
FAN05G2143 Fragaria x ananassa HOM05D002974 ORTHO05D002992 2.3e-06 56.2 70 50.0
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 2.3e-06 56.2 69 47.8
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.3e-06 56.2 108 41.7
Aa31LG10G11550 Aethionema arabicum HOM05D002974 ORTHO05D002992 3.0e-06 55.8 109 39.4
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 3.0e-06 55.8 134 34.3
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 4.0e-06 55.5 36 72.2
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 4.0e-06 55.5 36 69.4
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 4.0e-06 55.5 60 51.7
Ca_12961_v3 Cicer arietinum L. HOM05D002974 ORTHO05D002992 5.2e-06 55.1 83 45.8
Oeu029509.1 Olea europaea HOM05D002974 ORTHO05D002992 5.2e-06 55.1 142 33.1
Sed0012008 Sechium edule HOM05D002974 ORTHO05D002992 5.2e-06 55.1 69 44.9
TWI53G1119 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 5.2e-06 55.1 73 45.2
A09p49560 Brassica napus HOM05D002974 ORTHO05D002992 6.8e-06 54.7 136 36.0
BraA09t40409Z Brassica rapa HOM05D002974 ORTHO05D002992 6.8e-06 54.7 136 36.0
Nitab4.5_0004588g0030 Nicotiana tabacum HOM05D015198 ORTHO05D002992 6.8e-06 54.7 77 44.2
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 6.8e-06 54.7 118 38.1
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 6.8e-06 54.7 55 52.7
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 6.8e-06 54.7 55 52.7
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 6.8e-06 54.7 131 35.1
BcaB01g03488 Brassica carinata HOM05D002974 ORTHO05D002992 8.9e-06 54.3 111 39.6
Ciclev10002803m.g Citrus clementina HOM05D002974 ORTHO05D002992 8.9e-06 54.3 51 54.9
DCAR_013643 Daucus carota HOM05D002974 ORTHO05D002992 8.9e-06 54.3 113 38.1
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 8.9e-06 54.3 80 42.5
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 8.9e-06 54.3 93 39.8
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 8.9e-06 54.3 141 33.3
RcHm_v2.0_Chr2g0125651 Rosa chinensis HOM05D002974 ORTHO05D002992 8.9e-06 54.3 51 52.9


User provided reference genes

Program Settings